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Protein block serum free reagent

Manufactured by Agilent Technologies
Sourced in United States, Denmark

Protein Block Serum-Free reagent is a laboratory reagent designed to block non-specific protein binding in immunoassays and other protein-based experiments. It is a serum-free formulation that does not contain any animal-derived components.

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15 protocols using protein block serum free reagent

1

Immunohistochemical Analysis of Tumor Markers

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Formalin-fixed paraffin-embedded specimens were cut into 4-μm sections and mounted on MAS-GP-coated slides (Matunami Glass Ind., LTD., Osaka, Japan). For HMGA2, the sections were heated in an autoclave with 0.01 mol/L citrate buffer (pH 7.0) for 15 min at 121 °C for antigen retrieval after deparaffinization and rehydration. The sections were incubated with 0.3% H2O2 in absolute methanol for 30 min to block endogenous peroxidase activity. Then, the sections were incubated with Protein Block Serum Free Reagent (Dako, Glostrup, Denmark) for 15 min to block nonspecific staining. After the blocking step was completed, the sections were incubated with antibodies against HMGA2 (D1A7; Cell Signaling Technology, Danvers, MA, USA), VEGF-A (RB-9031; Thermo Fisher Scientific, Waltham, MA, USA), VEGF-C (H-190, Santa Cruz Biotechnology, Inc., Dallas, TX, USA), FGF-2 (147, Santa Cruz Biotechnology, Inc., Dallas, TX, USA), and CD34 (BI-3C5, Santa Cruz Biotechnology, Inc., Dallas, TX, USA) at 4 °C overnight. This was followed by sequential 60-min incubations with the secondary antibodies (EnVision + System-HRP Labelled Polymer, Dako, Glostrup, Denmark) and visualization with the Liquid DAB+ Substrate Chromogen System (Dako, Glostrup, Denmark). All slides were lightly counterstained with hematoxylin for 30 s prior to dehydration and mounting.
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2

Immunohistochemical Analysis of Lung Tissues

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Lung tissues collected from euthanized animals were fixed with 4% paraformaldehyde
phosphate buffer solution (Wako Pure Chemical Industries, Ltd., Tokyo, Japan) and embedded
in paraffin wax. Sections (2–4 µm thick) were cut and stained with haematoxylin and eosin
(HE). Immunohistochemical staining was performed by polymer method using Histofine Simple
Stain MAX-PO (Rat) (NICHIREI BIOSCIENCE INC, Tokyo, Japan) or Histofine Simple Stain
MAX-PO (M) (NICHIREI BIOSCIENCE INC). Endogenous peroxidase activity was blocked by 3%
hydrogen peroxide in methanol. Subsequently, sections were incubated with protein block
serum-free reagent (DAKO, Carpinteria, CA, USA) for blocking non-specific reactions. Then
they were incubated with the antisera for 16 hr at 4°C, as primary immunoreaction. The
antisera from rat (1:1,000) were used for sections of guinea pig and mouse, and the
antisera from mouse (1:1,000) were used for sections of rat. Then they were treated with
Histofine Simple Stain MAX-PO (Rat) for tissues of guinea pig and mouse, and with
Histofine Simple Stain MAX-PO (M) for rat tissues for 30 min at room temperature. For
immunohistochemical detection, 3,3′-diaminobenzidine tetrahydrochloride solution (ImmPACT
DAB Peroxidase Substrate; Vector Laboratories, Burlingame, CA, USA) was used.
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3

Nesfatin-1 Immunofluorescence Staining

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Sections were deparaffinized in 100% xylene and rehydrated in a graded ethanol series. Protein Block Serum-Free reagent (Dako) was used for blocking for 10 min. The sections were then incubated in rat anti-nesfatin-1 primary polyclonal antibodies (raised in sheep, 1:500 dilution; AF6895, R&D Systems, USA) for 18 h at room temperature in the hypothalamus. After incubation, the slides were washed thrice with 1 × PBS for 10 min each time at room temperature) and incubated with donkey anti-sheep immunoglobulin (Ig) G-fluorochrome NL557 (1:200 dilution; NL010, R&D Systems, USA) secondary antibody for 1 h at room temperature. The slides were washed thrice with 1 × PBS for 10 min each time at room temperature and mounted with Vectashield mounting medium containing 4, 6-diamidino-2-phenylindole (DAPI; blue nuclear stain; Vector Laboratories). The negative controls were not incubated with primary antibody and were only treated with secondary antibody.
All the images were taken using a fluorescence microscope (Olympus, Japan). Representative images were chosen from a large number of sections taken from all animals. The preabsorption control for the nesfatin-1 primary antibodies used here was validated by immunofluorescence staining with a well-characterized antiserum.
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4

Immunofluorescence Staining of Aortic α-SMA

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For immunofluorescence staining, the tissues were deparaffinized and endogenous peroxidases in the specimens were blocked using Peroxidase-Blocking Solution (DakoCytomation A/S, Agilent Technologies, Inc., Santa Clara, CA, USA) at room temperature for 5 min. Before immunohistochemical staining, we performed an antigen retrieval step by boiling the specimens in 10 mM citrate buffer (pH 6.0) using a microwave oven for 20 min. After incubation with Protein Block Serum-Free Reagent (DakoCytomation A/S) at room temperature for 5 min, the specimens were incubated with rabbit anti-α-SMA polyclonal antibody (1:100; Proteintech Group, Chicago, IL, USA) at room temperature for 60 min, and then washed. The specimens were then incubated with anti-rabbit immunoglobulin/TRITC (1:40, DakoCytomation A/S) at room temperature for 30 min. Nuclear staining and mounting were performed using VECTASHIELD® Mounting Medium with DAPI (Vector Laboratories, Burlingame, CA, USA). The specimens were observed under a BZ-X700 fluorescence microscope (KEYENCE, Tokyo, Japan), and α-SMA fluorescence intensity was measured as the average intensity per unit area along the aorta using BZ-X800 Analyzer version 1.1.1.8 software (KEYENCE, Tokyo, Japan).
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5

Glycosylation Analysis of Tumor Antigens

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Peroxidase conjugated ABC reagent, Vectastain Elite ABC standard kit was from Vecter Laboratories, Inc. (Burlingame, CA, USA). Antihuman AGP rabbit serum and Protein Block Serum-Free Reagent were from Dako (Carpinteria, CA, USA). Peroxidase conjugated anti-human AGP and Universal HIER antigen retrieval reagent were from Abcam (Cambridge, UK). KPL SureBlue TMB Microwell Peroxidase Substrate was from Sera Care Life Sciences (Milford, MA, USA). Anti-PD-L1 and SignalStain Boost IHC Detection Reagent were obtained from Cell Signaling Technology (Danvers, MA, USA). N-Histofine High Stain HRP (Multi) was from Nichirei Biosciences Inc. (Tokyo, Japan). PNGase F was from Roche Applied Science (Indianapolis, USA). BlotGlyco was obtained from Sumitomo Bakelite, Co. (Tokyo, Japan). Neuraminidase (Arthrobacter ureafaciens, 1U/ml) was purchased from Nacalai Tesque (Kyoto, Japan). Biotinylated Aleuria aurantia lectin (AAL) was kindly provided by Prof. Naohisa Kochibe, Gunma University. Tumor-associated antigens in serum samples measured in this study were carcinoembryonic antigen (CEA) and squamous cell carcinoma (SCC). Levels of each antigen were determined by an ELISA using the Cobas system (Roche for CEA) and the ARCHITECT system (Abbot for SCC) and standard cut-off values were set at 5.0 ng/ml for CEA and 1.5 ng/ml for SCC, respectively.
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6

Quantifying Hypoxia and DNA Damage in Tumor Tissues

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Tumor tissues were excised 1 hour after intravenous injection of pimonidazole (60 mg/kg, Hypoxyprobe Inc.), frozen with Tissue-Tek O.C.T. compound (Sakura Finetek USA Inc.) by ultra-cold ethanol and sectioned (10 mm). After fixing with 4 % paraformaldehyde, sections were treated with cold acetone for 15 minutes. After blocking nonspecific-binding sites on sections with Protein Block Serum-Free reagent (Dako North America Inc.) for 30 minutes, the slides were covered by pimonidazole antibody (Hypoxyprobe-1 Omni Kit, Hypoxyprobe Inc.; 1:250) overnight at 4 C. The sections were then incubated with Alexa Fluor 488 secondary antibody for 1 h at room temperature, before being mounted with Prolong Gold antifade reagent with DAPI (Invitrogen). For γH2AX staining, anti-γH2AX antibody (Abcam, Inc.; 1:250) was used, followed by same staining procedures as above. The stained slides were scanned using a BZ-9000 microscope (Keyence), and the immunostain-positive area was quantified using ImageJ software (downloaded from https://imagej.nih.gov/ij/).
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7

Immunohistochemical Analysis of ΔNp63 and p53 in ESCC

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Immunohistochemical analysis was carried out on formalin‐fixed and paraffin‐embedded ESCC sections. The sections were deparaffinized, blocked in Protein Block Serum‐Free Reagent (Dako, Carpinteria, CA, USA) for 30 min, and incubated overnight with diluted primary antibodies at 4°C in a humidified chamber. Staining reactions were developed using Histofine Simple Stain MAX‐PO Multi Kit (Nichirei, Tokyo, Japan) for immunohistochemistry. Meyer's hematoxylin (IHC World, Woodstock, MD, USA) was used as a nuclear counterstain.
Expression of ΔNp63 and p53 was determined by immunohistochemical staining with an anti‐ΔNp63 rabbit polyclonal antibody (1:100 dilution) and an anti‐p53 mouse mAb (DO7, 1:50 dilution; Dako) as previously described.25, 26 ΔNp63 expression was considered positive if nuclear staining was present, and was scored semiquantitatively based on the percentage of positive cells as follows: 0, 0%; 1, 1%–25%; and 2, >25%. Tumors scored as 0 were defined as negative expression, and those scored as 1 or 2 were defined as positive expression. P53 microscopic examination for the nuclear reaction product was undertaken and scored. P53 expression in >10% of tumor cells was defined as positive expression. The tissue sections were assessed using light microscopy in a blinded fashion by at least two of the authors.
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8

Immunostaining of CD82 and CD318

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For CD82 and CD318 immunostaining, sections were treated with Antigen Retrieval Reagent-Universal solution (R&D Systems) at 95°C for 5 min. Specimens were blocked with protein-block serum-free reagent (Dako) for 15 min, and incubated with primary antibodies at 4°C overnight, followed by secondary staining. Antibodies used are described in Supplemental Experimental Procedures. Specimens were counterstained with DAPI (Invitrogen) and mounted with SlowFade Gold anti-fade reagent (Invitrogen). Stained samples were photographed using a fluorescence microscope BX51 (Olympus), an inverted fluorescence microscope BZ-9000 (Keyence), or an inverted fluorescence microscope DMI4000B (Leica). Confocal images of muscle sections were taken using the confocal laser scanning microscope system LSM700 (Carl Zeiss).
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9

D2-40 Immunohistochemistry Protocol

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Immunohistochemical staining was performed using 5-μm-thick sections. All sections were incubated at 60 °C for 60 min, deparaffinized in xylene, rehydrated, and incubated with fresh 0.3% hydrogen peroxide in 100% methanol for 30 min at room temperature to block endogenous peroxidase activity. After the specimens were rehydrated through a graded ethanol series, antigen retrieval was performed in an Immunosaver (Nissin EM, Tokyo, Japan) at 98–100 °C for 60 min, and sections were passively cooled to room temperature. After the sections were rinsed in 0.1 M of phosphate-buffered saline (pH 7.4), non-specific binding sites were blocked via incubation with Protein Block Serum-Free Reagent (Dako, Carpenteria, CA, USA) for 30 min. The sections were then incubated with D2-40 antibody (Dako) at a dilution of 1:200 overnight at 4 °C and at room temperature for 30 min. The reactions were visualized using a Histofine Simple Stain MAX-PO (Multi) Kit (Nichirei, Tokyo, Japan) according to the manufacturer’s instructions. The chromogen 3,3′-diaminobenzidine tetrahydrochloride was applied as a 0.02% solution in 50 mM OF ammonium acetate-citrate acid buffer (pH 6.0) containing 0.005% hydrogen peroxide. The sections were lightly counterstained with hematoxylin, and then mounted. Negative controls were incubated without the primary antibody, and no detectable staining was evident.
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10

Immunohistochemical Localization of NK-1 Receptor

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3 to 5 mm sections of FFPE tissue blocks of the 59 samples were prepared for the immunohistochemistry (IHC) with NK-1 receptor (ab219600, Anti-NK-1R antibody, Rabbit polyclonal, 1 : 100). After the overnight incubation at 4 o C NK-1R (Abcam, 1 : 100) staining was performed manually. Sections were incubated in peroxidase-blocking solution (Dako Cytomation A/S) for 5 min and heated at 100°C for 60 min. This step was followed by incubation with a protein block serum-free reagent (Dako Cytomation A/S). After incubation for 32 min at 37°C, the tissue sections were incubated with a universal secondary antibody (Roche Diagnostics KK) for 20 min at 37°C and then visualized by the DAB Map detection kit (Roche Diagnostics KK).
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