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5 protocols using pp53 ta luc

1

Quantifying TP53 Transcriptional Activity

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The reporter vector pp53-TA-Luc (Clontech Carlsbad, CA, USA) was used to quantify TP53 transcriptional activity. The vector contains a TP53 responsive element located upstream the TATA box from the herpes simplex virus timidine kinase promoter (pTA). Downstream of pTA is the firefly luciferase reporter gene (Luc). The pRL-TK vector contains the herpes simplex virus thymidine kinase promoter to provide low to moderate levels of Renilla luciferase expression in co-transfected mammalian cells. The vector was used as an internal control reporter in combination with pp53-TA-Luc reporter vector. Luciferase activity was measured using a dual luciferase kit (Promega, WI, USA) and quantified at a luminometer (Turner, Biosystems, Sunnyvale, CA, USA). Each condition was assayed in four replicates in two independent experiments. The TP53 mammalian expression vectors pc53SN, which carries a human wild type TP53 cDNA were a kind gift of Dr. Arnold Levine and were previously described [45 (link)].
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2

Cloning of HPV Oncogenes into Retroviral Vector

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The genes HPV6 E6, HPV6 E7, HPV11 E6, HPV11 E7, HPV16 E6 and HPV16 E7 were amplified by PCR containing restriction enzyme sites. These PCR products were digested with restriction enzymes, Bgl II and Xho I (New England Biolab), and ligated to pMSCV-puro vector (Clontech). Plasmids expressing EBV LMP-1, (i.e. pMSCV-neo-LMP-1) were prepared as previously described [15 (link)]. pNF-κB-TA-luc, pp53-TA-luc, pβ-gal-basic (Clontech) and pcDNA3.1/Zeo (+) (Invitrogen) were also used for assays.
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Plasmid Transfection in Cells

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The plasmid expressing DNM IκB-α, the pSV-β-galactosidase control vector, and the reporter plasmids of pNF-κB-Luc and pp53-TA-Luc were purchased from Clontech (Palo Alto, CA), Promega Corp. (Madison, WI), and Stratagene Inc. (La Jolla, CA), respectively. The plasmid or control vector was transfected into cells by use of Lipofectamine 2000 transfection reagent (Invitrogen) according to the manufacturer’s instructions.
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4

Cloning and Profiling of miR-424-5p

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The human miR-424-5p gene was PCR amplified from genomic DNA and cloned into a pMSCV-puro retroviral vector (Clontech, Japan). Pathway Profiling System, including pAP1-luc, pCRE-luc, pE2F-TA-luc, pERE-luc, pGRE-luc, pHSE-luc, pISRE-TA-luc, pMYC-luc, pNF-κB-TA-luc, pp53-TA-luc, pSRE-luc, and pSTAT3-TA-luc, was purchased from Clontech (PT3286-1). HOPFlash (Catalog [Cat.] 83467), HIPFlash (Cat. 83466), TOPFlash (Cat. 12456), and FOPFlash (Cat. 12457) were purchased from Addgene. The 3′ UTRs of WWC1, SAV1, and LATS2 were PCR amplified from genomic DNA and cloned into pmirGLO vectors (Promega, USA), and the list of primers used in cloning reactions was provided in Table S3. Anti-miR-424-5p was synthesized and purified by GENECHEM (China). The primers of the mutant plasmid for WWC1, SAV1, and LAST2 were synthesized and purified by HDbio (Guangzhou, China). Transfection of plasmids was performed as previously described.46 (link)
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5

Pathway Reporter Assays in ESCs

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Pathway reporter vectors pAP1-TA-luc, pAP1 (PMA)-TA-luc, pISRE-TA-luc, pP53-TA-luc, and the negative control pTA-luc were purchased from Clontech Laboratories, Inc. (Mountain View, CA, USA). Other signaling transduction reporter vectors including pCRE-TA-luc and pGRE-TA-luc were constructed in our laboratory by inserting their cis-acting DNA binding sequence into the multiple cloning sites of pTA-luc [31 (link)]. Luciferase assays were performed with the dual-luciferase reporter assay system (Promega) according to the manufacturer's instructions. Briefly, pathway reporter vectors and pRL-SV40 were cotransfected into ESCs by Lipofectamine 2000 (Invitrogen) according to the manufacturer's protocol. At 24 h after transfection, 1 μM PD or an equal volume of DMSO was added to culture medium for another 24 h. Cells were then lysed in passive lysis buffer and luciferase activity was measured on a VICTOR X5 Multilabel Plate Reader (PerkinElmer, Norwalk, CT, USA).
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