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36 protocols using eclpse 80i

1

Spinal Cord Injury Histopathology Assessment

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Animals were anaesthetized and transcardially perfused with 0.9% NaCl followed by 4% paraformaldehyde (PFA) at 7 days following SCI. T7–T9 spinal cord segments near the lesion epicentre were collected and fixed in 4% PFA for 24 hrs and embedded in paraffin for transverse sectioning. Five micrometer thick sections were prepared on poly‐L‐lysine‐coated slides for subsequent histopathological examination. The sections were stained with haematoxylin and eosin for H&E staining and cresyl violet for Nissl staining, in accordance with the manufacturer's instructions. All images were captured using a Nikon ECLPSE 80i (Nikon, Tokyo, Japan). The epicentre cavity area was traced using contour mapping with IPP software on sections. Nissl‐positive cells were automatically counted in five randomly selected fields per sample and quantified using IPP software.
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2

Immunohistochemical Staining of Kidneys

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The kidneys were collected and fixed with 4% paraformaldehyde in phosphate‐buffered saline (PBS). Kidneys were dehydrated in alcohol and embedded with paraffin. After dewaxing, rehydrating and washing in PBS, the 5‐μm sections were respectively incubated with 5% bovine serum albumin (BSA) in 37°C oven for 0.5 hours. Then, the sections were incubated with mouse anti‐IgM (1:400; Abcam) as primary antibody in 4°C overnight. After triple washing in PBS at room temperature, the sections were once again incubated with donkey anti‐mouse TR (1:1000; Abcam) as secondary antibody for 4 h. Fluorescence images were captured using a Nikon ECLPSE 80i.
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3

Tissue Histological Staining and Imaging

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The tissue sections were stained with H&E and crystal violet, according to manufacturer's instructions. The images were captured by a Nikon ECLPSE 80i (Nikon, Tokyo, Japan).
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4

Histological Analysis of Hippocampal Damage

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Rats were anesthetized with 4% choral hydrate (10 ml/kg) and then perfused with 4% paraformaldehyde in 0.1 M phosphate buffer (pH 7.4). Brains were removed and post-fixed for 24 hours in the same fixative. Post-fixed brains were embedded in paraffin and sliced on a microtome at a 5 μm thickness. The sections between 2 mm and 3 mm posterior of the bregma were used for this study. For histological assessment of damage to the hippocampus, the paraffin-embedded brain sections were mounted in Poly-L-Lysine-coated slides for histopathological examination by H&E staining. The sections were also incubated in 1% cresyl violet for Nissle staining. To determine CHOP and p-JNK activities, sections were incubated with 0.3% H2O2 in methanol for 30 minutes, and then submerged into blocking solution (1% albumin bovine in PBS) for 1 hour at room temperature prior staining. Primary antibodies, such as CHOP (1:200) and p-JNK (1:500) were applied on sections with overnight incubation at 4°C. After 3 times of PBS wash, they were incubated with horseradish peroxidase-conjugated secondary antibodies for 2 hours at 37°C. The reaction was terminated with 3, 3′-diaminobenzidine, and images were captured at 400x magnification using a Nikon ECLPSE 80i. The optical density of CHOP and p-JNK within the injury site in hippocampus were counted at five randomly selected fields per sample [55 (link)].
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5

Immunohistochemical Assessment of Apoptosis Markers

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To determine CHOP, GRP-78, cleaved-PARP and cleaved caspase-12 activities, sections were incubated with 0.3% H2O2 in methanol for 30 min., followed by blocking with 1% bovine albumin in PBS for 1 hr at room temperature. Next, the sections were incubated at 4°C overnight with a primary antibody against CHOP (1:200), GRP-78 (1:200), cleaved-PARP (1:200) or cleaved caspase-12 (1:1000). After primary antibody incubation, the sections were washed for 4 × 10 min. at room temperature and then incubated with donkey antimouse/rabbit, donkey antirabbit/mouse or donkey antigoat secondary antibody (1:500; Invitrogen) for 1 hr at room temperature. The saline injection group was considered the negative control. The images were captured using a Nikon ECLPSE 80i.
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6

Immunohistochemistry of Skin Extracellular Matrix

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After deparaffinization and rehydration of skin tissue sections, the endogenous peroxidase activity was blocked with 3% hydrogen peroxide for 15 min at room temperature. After washing with PBS, the nonspecific binding of the samples sites was blocked with 5% BSA for 30 min at 37°C. Subsequently, the sections were incubated at 4°C overnight with antibody against CD31 (1:100), VEGF (1:300), collagen I (1:300), and collagen III (1:300). Afterward, the tissues were washed thrice with PBS and incubated with biotinylated secondary antibodies that diluted with PBS (1:1,000) in 37°C for 1 h. The reaction was stopped by a DAB Chromogen Kit for all sections for 8 s to 3 min, and sections were counterstained with hematoxylin, hydrated, and mounted with a neutral resin. Images were taken using a Nikon light microscope (ECLPSE 80i, Nikon, Japan), and the positive areas of collagen I and collagen III were quantified through Image-Pro Plus 6.0 (Media Cybernetics, Inc., USA).
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7

Wound Healing Tissue Sampling and Analysis

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Three GK rats from each group were euthanized with 2.0% (w/v) pentobarbital by intraperitoneal injection at a dose of 0.6 mL per 100 g on days 7, 14, 25, and 31. The skins of each rat were cut along the wound-healing perimeter after the rats were sacrificed via anesthesia.
Half of each tissue sample was fixed in 4% (w/v) paraformaldehyde, embedded in paraffin, sectioned (5 µm thickness), and mounted onto poly-L-lysine-coated slides for H&E staining (Beyotime, Shanghai, China), and immunohistochemistry (IHC). Sections were photographed with a upright Nikon microscope (ECLPSE 80i, Tokyo, Japan) at 40-fold or 100-fold magnification to view the wound area. The other half of each tissue sample was placed in a 1.5 mL Eppendorf tube, labeled, dehydrated overnight with a 20% (w/v) sucrose solution, embedded with optimum cutting temperature (OCT) compound embedding agent, and then stored at −80°C until later use for analysis via immunofluorescence (IF).
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8

Histological Analysis of Kidney Tissue

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Tissues were fixed in 4% paraformaldehyde and subsequently embedded in paraffin. Sections (5 μm thick) were stained with hematoxylin and eosin (HE) using a standard protocol and analyzed by optical microscopy (Nikon ECLPSE 80i, Japan) to observed the mesangial cell proliferative. The collagen content of the kidney was detected by Masson’s trichrome kit (Sigma-Aldrich, USA). All above assay were experiment as previous.
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9

Immunohistochemical Quantification of Autophagy Markers

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To determine the LC3, p-62 and Ub activities, sections were incubated with 0.3% H2O2 in methanol for 30 min, followed by blocking with 1% bovine albumin in PBS for 1 h at room temperature. Next, the sections were incubated at 4°C overnight with a primary antibody against LC3 (1:200), p-62 (1:200) or cleaved Ub (1:200). After primary antibody incubation, the sections were washed for 4 × 10 min at room temperature and then incubated with donkey anti-mouse/rabbit, donkey anti-rabbit/mouse, or donkey anti-goat secondary antibody (1:500; Invitrogen) for 1 h at room temperature. The saline injection group was the negative control. The images were captured using a Nikon ECLPSE 80i.
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10

Histopathological Analysis of Gastric Tissue

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For histopathological examination, gastric tissues were fixed in 4% paraformaldehyde overnight. Selected tissue blocks were processed using a routine overnight cycle in a tissue processor. The tissue blocks were then embedded in wax, serially-sliced into 5 μm sections. The transverse sections were stained with Hematoxylin–Eosin (HE) for tissue damage, visualized and imaged under a light microscope (Nikon ECLPSE 80i, Tokyo, Japan).
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