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Axioskop 2 fs microscope

Manufactured by Zeiss
Sourced in Germany

The Axioskop 2 FS microscope is a versatile research-grade microscope designed for a wide range of applications. It features a modular, ergonomic design and supports various illumination and imaging techniques, including brightfield, darkfield, phase contrast, and differential interference contrast (DIC). The Axioskop 2 FS is capable of high-resolution imaging and is suitable for use in fields such as biology, materials science, and industrial quality control.

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15 protocols using axioskop 2 fs microscope

1

Multimodal Kidney Cyst Characterization

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Conventional histology was obtained from additional animals to help confirm cysts found in MRI. Animals (n=3) were perfusion-fixed and preserved at 5, 13, and 17 weeks of age. Kidneys were sectioned in the coronal plane, stored in 10% formalin, embedded in paraffin, and sectioned at 5-µm thickness. Sections were stained with Hematoxylin and Eosin (H&E). Slides were digitally scanned using brightfield contrast on an Axioskop 2 FS microscope (Carl Zeiss Microscopy, Thornwood, NY). Images were acquired at 1.02 µm using a 10x objective and tiling was required to cover the entire kidney section. Correction was applied to remove the shading effects and non-uniformities in the tiled images. MR images were manually registered to histology images to enable comparison of renal cysts from age-matched animals.
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2

Calcium Imaging of Larval Neurons

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Third instar wandering larvae expressing GCaMP6f in neurons of interest were dissected in TES buffer (135 mM NaCl, 5 mM KCl, 4mMMgCl2, 2 mM CaCl2, 5 mM TES (N-Tris[hydroxymethyl]methyl–2-aminoethanesulfonic acid), 36 mM sucrose)51 (link) and immobilized with double-faced tape (Nichiban). Imaging was performed with EMCCD camera (iXon; Andor) mounted on Axioskop2 FS microscope (Zeiss) with a 40X water-immersion objective lens and a spinning-disk confocal unit (CSU21; Yokogawa) at a rate of 10 Hz at 25 °C. Images were analysed using FIJI software52 (link). Region of interests (ROIs) were manually drawn around neurites and mean intensity was calculated. Mean intensity of each ROI was normalized and represented as ∆F/F0. F0 was calculated as an average intensity of the first 10 frames with no activity. We applied a look-up table “Royal” to stilled images depicting activities at certain time points to present as pseudocoloured images using FIJI.
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3

Validating Renal MRI Regions with Histology

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Regions identified in MRI were validated with conventional histology of representative kidneys from 17-week old mice (study termination age). Kidneys were sliced in the coronal plane, stored in 10% formalin, embedded in paraffin, and sectioned at 5-μm thickness. Sections were stained with Hematoxylin and Eosin (H&E). Slides were digitally scanned using brightfield contrast on an Axioskop 2 FS microscope (Carl Zeiss Microscopy, Thornwood, NY). Images were acquired at 1.02 μm using a 10× objective and tiling was required to cover the entire kidney section. Correction was applied to remove the shading effects and non-uniformities in the tiled images. MR images were manually registered (translation, rotation, and scaling) to histology images to enable comparison and confirmation of region segmentation. The identified regions in MRI and histology were confirmed by a renal physiologist (M.A.K.) and a board-certified veterinary pathologist (B.R.B.).
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4

Intracellular Membrane Potential Recording

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Square‐shaped sections taken from leaves were mounted with their abaxial side up into a Petri dish with double‐sided adhesive tape, flooded with bath solution (5 mM KCl, 1 mM CaCl2, 10 mM MES, pH 6) and placed on an Axioskop 2FS microscope (Zeiss). The microelectrodes (double‐barreled) and the reference electrode were prepared as described by Voss et al. (2016). A piezo‐driven micromanipulator (MM3A, Kleindiek Nanotechnik, Reutlingen, Germany) was used to drive the microelectrode into the cell, and the membrane potential was recorded with a CA‐100 amplifier equipped with HS‐180 headstages (BioLogic, Seyssinet‐Pariset, France).
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5

In Vitro Acute Hippocampal Slice Electrophysiology

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Preparation and maintenance of acute slices in vitro and composition of extracellular and intracellular solutions for electrophysiological experiments were performed according to previously published procedures (Mańko et al., 2012 (link)) and as described in Alcami et al. (2012) (link), with minor modifications. Optical stimulation of hippocampal ChR2-expressing afferents in the BA in vitro was performed using an optoLED system (Cairn Research) mounted on a Zeiss Axioskop 2 FS microscope. The spot size corresponded to an area of about 200 μm. Optical TBS consisted of ten trains delivered at the same frequency as for the in vivo experiments. Analysis of electrophysiological signals was performed using MATLAB custom scripts. Full details on ex vivo electrophysiology, optogenetics, and analysis are given in the Supplemental Information.
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6

Electrophysiology and Calcium Imaging in Islet Cells

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The electrophysiological measurements were performed in intact islets essentially using the perforated-patch whole-cell technique in the voltage- or current-clamp modes in δ-cells.
Parallel measurements of [Ca2+]i and membrane potential were performed using an Axioskop 2FS microscope (Zeiss, Oberkochen, Germany) equipped with a 40x/0.8 objective, Lambda DG-4 exciter (Sutter Instruments, USA) and Orca-R2 cooled CCD camera (Hamamatsu, Japan). Images were acquired using an open-source Micromanager software (developed at Ron Vale’s lab, UCSF, San Francisco, USA) and processed using ImageJ. Data analysis was performed in Igor Pro (Wavemetrics).
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7

Electrophysiology and Calcium Imaging in Islet Cells

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The electrophysiological measurements were performed in intact islets essentially using the perforated-patch whole-cell technique in the voltage- or current-clamp modes in δ-cells.
Parallel measurements of [Ca2+]i and membrane potential were performed using an Axioskop 2FS microscope (Zeiss, Oberkochen, Germany) equipped with a 40x/0.8 objective, Lambda DG-4 exciter (Sutter Instruments, USA) and Orca-R2 cooled CCD camera (Hamamatsu, Japan). Images were acquired using an open-source Micromanager software (developed at Ron Vale’s lab, UCSF, San Francisco, USA) and processed using ImageJ. Data analysis was performed in Igor Pro (Wavemetrics).
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8

Whole-cell patch-clamp recordings of cortical neurons

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Brain slices were transferred to a recording chamber constantly perfused with 32 to 34°C warm ACSF containing (in mM): 119 NaCl (Sigma-Aldrich), 2.5 KCl, 1 NaH2PO4, 1.3 MgCl2, 26 NaHCO3, 10 D (+)-glucose and 2.5 CaCl2 (all from Merck, Darmstadt, Germany) bubbled with a gas mixture of 95% O2 and 5% CO2. Cortical pyramidal neurons were visualized in layer 5 with an Axioskop 2 FS + microscope (Carl Zeiss MicroImaging GmbH, Göttingen, Germany) equipped with infrared differential interference contrast. Patch pipettes were pulled (P-97 micropipette puller, Sutter Instruments, Novato, CA, USA) to a resistance of 3 to 5 MΩ. For recordings with 4β-PMA and Bryostatin1 intracellular solution comprised (in mM) 120 K-gluconate, 10 Na-phosphocreatine, 11 EGTA, 2 Mg2+ATP, 0.3 Tris-GTP (Sigma-Aldrich), 10 KCl, 1 MgCl2, 1 CaCl2 and 10 HEPES. For experiments with IFN-β, pipette solution contained (in mM): 120 K-methylsulphate (KMeSO4) (ICN Biomedical Inc, California, USA), 20 KCl, 14 Na-phosphocreatine, 4 NaCl, 0.5 EGTA, 10 HEPES, 4 Mg2+-ATP, 0.3 Tris-GTP and 0.1 cAMP (Sigma-Aldrich). The pH of intracellular solutions was adjusted with KOH (Carl Roth, Karlsruhe, Germany) to 7.2.
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9

Multimodal Imaging of Kidney Microstructure

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After all MR images were collected, one representative kidney was imaged with 2-photon confocal microscopy and conventional histology. First, the kidney was sectioned near the center coronal plane, cleared using 4M urea (41 ), and scanned using autofluorescence on a LSM 510 Meta confocal microscope (Carl Zeiss Microscopy, LCC, Thornwood, NY). The laser excitation was two photons at 1000 nm. Emission was detected at 500–550 nm (green channel) and 575–640 nm (magenta channel). Images were acquired at 1.6-μm resolution, at 20-μm depth, and with 14 slices covering 280 μm of tissue using a 20x objective (Zeiss W Plan-Apochromat, NA 1.0). The intact half-sections were then immersed back into 1X (10mM) PBS, embedded in paraffin, and serially sectioned at 5-μm thickness. Sections were stained with Hematoxylin and Eosin (H&E) and Masson’s Trichrome. These slides were scanned using bright field contrast on an Axioskop 2 FS microscope (Carl Zeiss Microscopy, LCC, Thornwood, NY). Images were acquired at 0.65-μm resolution using a 10x objective. Both confocal and optical imaging required tiling to cover the entire kidney. Correction was applied to remove the shading effects and non-uniformities in the tiled images. MR images were manually registered to confocal and optical images to enable comparison.
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10

Electrophysiological Characterization of 2D, 3D-C, and 3D-CG NSC Neurospheres

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Field recordings were performed on NSC neurospheres grown in 2D, 3D-C, and 3D-CG cultures at 3, 5, and 7 DIV. Artificial cerebrospinal fluid (125 mM NaCl, 7.5 mM KCl, 26 mM NaHCO3, 3 mM CaCl2, 10 mM glucose pH 7.4, 315 mOsm/l) oxygenated with 95% O2 was continuously perfused during recordings. An extracellular recording electrode filled with 2 M NaCl was placed inside neurospheres identified via DIC bright-field microscopy using an Axioskop 2FS microscope (Carl Zeiss, Inc., Jena, Germany). Voltage responses were amplified by a BVC-700A amplifier (Dagan Corp., Minneapolis, MN, USA) and digitized by a ITC-18 board (Instrutech, Inc.) on a PC. Data were acquired and analyzed using custom scripts in IgorPro software (Wavemetrics, Inc., Lake Oswego, OR, USA). Spontaneous field excitatory postsynaptic potential traces were acquired for 20 min before the addition of bicuculine (Tocris) and for 30 min after. Spontaneous events were identified as voltage responses larger than four times the SD σb of the background signal. The average number of spontaneous events for each sample was calculated from traces covering the last 5 min before the addition of bicuculine and the last 5 min of the 30 min recording period after the addition of bicuculline.
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