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Escherichia coli bl21 de3 cells

Manufactured by Tiangen Biotech
Sourced in China

Escherichia coli BL21 (DE3) cells are a widely used bacterial strain for recombinant protein expression. These cells are derived from the E. coli B strain and contain the DE3 lysogen, which carries the T7 RNA polymerase gene under the control of the lac operon. This strain is commonly used for the expression of proteins under the control of the T7 promoter.

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5 protocols using escherichia coli bl21 de3 cells

1

Cloning and Purification of EgHCDH Protein

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Total RNA was extracted using an RNA prep Pure Tissue Kit (Nanjing Vazyme Biotech, Nanjing, China). First-strand cDNA was synthesized using a reverse transcription system kit (Nanjing Vazyme Biotech). The full coding sequence of the non-membrane region of EgHCDH was amplified using the primers 5′- CGG GAT CCA TGT CAG CCG GTG CTG G-3′ (BamHI) and 5′-GAC GTC GAC TCA CTG TTT TTC CTT GAC AAT GCG C-3′ (SalI). Amplification reactions were performed using the following cycling conditions: pre-denaturation at 95 °C, 5 min; then denaturation at 95 °C/30 s, 62 °C/30 s, 72 °C/1 min; with a final extension at 72 °C, 5 min. Through sequencing, digestion and ligation, EgHCDH was ligated into the pET32a (+) plasmid (Novagen, Darmstadt, Germany) and transformed into Escherichia coli BL21 (DE3) cells (Tiangen, Beijing, China). Protein expression was induced with 1 mM isopropyl-1-thio-β-d-galactopyranoside at 37 °C for 6 h. The rEgHCDH protein was purified using Ni2+ affinity chromatography (Bio-Rad, Hercules, CA, USA), with the the purity of the final product determined by 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). The concentrations of the purified protein were determined using a NanoDrop 2000c spectrophotometer (Bio-Rad).
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2

Cloning and Purification of SjLGL Protein

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Upstream and downstream oligonucleotides, 5′-CCGGAATTCATAGTCGCTCTAGGCCATTC-3′ and 5′-CCCAAGCTTTCAGTTAAACTTCTTTCGGTG-3′ (EcoRI and HindIII sites are underlined, resp.), were used to amplify the partial Sjlgl coding sequence (GenBank accession number AY812588) from bp 1866–2711. The 846 bp fragment was generated by polymerase chain reaction (PCR) and cloned into the pET-28a (+) vector (Novagen, Darmstadt, Germany), and its identity was confirmed by sequencing.
Overexpression of rSjLGL, with an aminoterminal histidine tag, in Escherichia coli BL21 (DE3) cells (Tiangen Biotech Co., Ltd., Beijing, China) was induced by treatment with 1 mM isopropyl-β-d-thiogalactopyranoside (IPTG) at 37°C for 5 h. Bacteria were harvested by centrifugation at 10,000 ×g for 15 min. The supernatant was discarded, and the pellet was suspended in 50 mL of phosphate-buffered saline (PBS, pH 7.4) and lysed using ultrasound to release the fusion protein. Following centrifugation at 10,000 ×g for 15 min, the inclusion body protein was extracted in PBS containing urea and purified by passage through Ni-NTA His-Bind Resin (Qiagen GmbH, Hilden, Germany).
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3

Recombinant SjVAMP2 Protein Expression

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The purified recombinant plasmid, pMD19-T-SjVAMP2 was digested with EcoRI and XhoI, and then was ligated to the pET28a (+) vector (Invitrogen) overnight at 16°C using T4 DNA ligase (TaKaRa). The resulting plasmid, pET28a(+)/SjVAMP2, in which a His tag was fused to SjVAMP2, was transformed into Escherichia coli BL21(DE3) cells (Tiangen). Transformed bacterial cells were induced by isopropyl-1-thio-b-D-galactoside (IPTG) to a final concentration of 1 mM at 20°C for 6h, then pelleted by centrifugation at 12,000 g for 15 min, resuspended in phosphate-buffered saline (PBS, pH 7.4), and frozen at −80°C until used. Frozen cells were lysed by sonication and pelleted by centrifugation at 4°C, 12,000 g for 15 min. The insoluble pellet was resuspended in binding buffer containing 8 M urea, while the soluble supernatant was conserved. The crude extract was analyzed by SDS–PAGE.
The supernatant containing rSjVAMP2-His was purified with an Ni-NTA His-Bind Resin (Qiagen GmbH, Hilden, Germany) and dialyzed against PBS (pH 7.4), containing decreasing concentrations of urea (6, 4, 3, 2, and 1 M) and then PBS only. rSjVAMP2-His was concentrated using Centricon microconcentrators (Amicon Millipore, Shanghai, China), and the protein concentration was determined by the Bradford method using bovine serum albumen (BSA) as a protein standard.
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4

Recombinant Protein Expression in E. coli

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All proteins were expressed in Escherichia coli BL21 (DE3) cells (Tiangen) in the presence of 0.5 mM isopropyl β-D-1-thiogalactopyranoside (IPTG). Cells were induced overnight at 18°C, collected and resuspended in lysis buffer (20 mM HEPES pH 7.4, 500 mM KCl, 1 mM PMSF). The cells were then lysed using High Pressure homogenizer (ATS Engineering Limited) and centrifuged. The supernatants were first purified with Ni-NTA and amylose resin (GenScript), followed by purification on a Superdex 200 increase 10/300 column (SD200) (GE healthcare). Proteins were stored in storage buffer (20 mM HEPES pH 7.4, 150 mM KCl, and 1 mM DTT) at -80°C after being flash-frozen in liquid nitrogen.
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5

Recombinant His-WUS Protein Purification

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The SlWUS coding sequence was cloned into the pET-30a vector (Biovector) to produce and purify recombinant His-WUS fusion protein. The resulting pET30a-WUS construct was transformed into Escherichia coli BL21 (DE3) cells (TIANGEN). Positive colonies were cultured in LB liquid medium containing 50 µg/mL kanamycin at 37°C until OD 600 reached 0.6-0.8. Isopropyl β-D-1-thiogalactopyranoside was then added to the culture to a final concentration of 0.5 mM to induce recombinant protein production. Recombinant protein purification was performed using a His Tag Protein Purification Kit (CWBIO). EMSA was performed using a Chemiluminescent EMSA Kit (Beyotime). The 5′ biotin-labeled probe was prepared by the Saibaisheng Company (China). All oligonucleotide probes used in this study are listed in Supplemental Data Set S1.
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