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8 protocols using anti gr 1 pe

1

Quantification of Myeloid-Derived Suppressor Cells

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Erythrocyte-free single cell suspensions from the spleen and tumor were incubated with anti-CD11b-APC (Biolegend, USA) and anti-Gr-1-PE (Biolegend, USA) antibodies at 4°C for 15 min in dark. After washed in buffer and centrifuged, the cell precipitation was resuspended. The percentage of CD11b+ Gr-1+ double-positive MDSCs was analyzed by flow cytometry (Beckman Coulter, Pasadena, CA, USA). To determine the CXCR4-positive expression rate in the CD11b+ Gr-1+ MDSCs group, normal mice were divided into two groups, which were treated with exosomes and PBS, respectively. The single cell suspension from the bone marrow and spleen of two groups were stained by anti-CD11b-FITC (Biolegend, USA), anti-Gr-1-PE (Biolegend, USA), and anti-CD184-APC (Biolegend, USA) antibodies and then analyzed by flow cytometry.
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2

Activated T cell Immunophenotyping in Mice

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Adequate single cells were isolated from the spleen, peripheral blood, colon adjacent tissues, and adenoma tissues of mice. These cells were incubated with the appropriate surface antibodies: anti-CD45-PE/Cy7 (Biolegend, Cat# 103113), anti-CD3-PE/Cy7 (Biolegend, Cat# 100219), anti-CD4-FITC (Invitrogen, 11-0041-85), anti-CD8a-APC (Invitrogen, 47-0081-82), anti-CD11b-FITC (Biolegend, Cat# 101206), anti-Gr-1-PE (Biolegend, Cat# 108408), anti-CD107a-FITC (Biolegend, Cat# 121605), and anti-CD137-APC (Biolegend, Cat# 106109). For intracellular staining, cells were treated with the Fixation/Permeabilization solution (Invitrogen, 00-5223-56) overnight at 4 °C before incubating with intracellular antibodies: anti-IFNγ-PE (Biolegend, Cat# 163503). CD4+ T cells were defined as CD45+CD4+CD8a; CD8+ T cells were defined as CD45+CD4CD8a+; activated CD4+ T cells were defined as CD3+CD4+CD137+IFNγ+; and activated CD8+ T cells were defined as CD3+CD8a+CD107a+IFNγ+ [23 (link),24 (link)]. Data acquisition was performed on an Accuri C6 Plus and analyzed using FlowJo (RRID:SCR_008520).
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3

Intravital Microscopy of Inflammatory Responses

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Mice were stimulated by injecting 10 g/kg tumor necrosis factor alpha (TNFα) i.p. 4 h prior to intravital microscopy. Following ketamine (100 mg/kg) and xylazine (100 mg/kg) anesthesia and rhodamine injection (i.p.), we exposed the mesenteric venules and recorded up to 12 30 s clips per mouse.
Rhodamine intravital microscopy was performed with a Axiotech vario 100 HD microscope, a AxioCam Mrm digital camera, and Colibri 2 light source (all Zeiss, Oberkochen, Germany).
For two-color intravital microscopy, mice were injected intravenously with X488/anti-GPIbβ (emfret Analytics, Eibelstadt, Germany) to label platelets and with anti-Gr1-PE (Bio Legend) to label neutrophils and classical monocytes 15 min prior to image recording. Analysis was performed with a Nikon® FN-S2N fluorescence microscope, Hamamatsu Orca-05G digital camera and Nikon Intenslight C-HGFIE.
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4

Characterization of Myeloid Cell Differentiation

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The percentage of viable cells was determined using Annexin-V-APC (BioLegend, San Diego, CA, USA), while expression of cell surface markers was measured by staining cells with anti-c-kit-PE-Cy7, anti-Gr-1-PE and anti-Mac-1-APC (all from BioLegend) according to the manufacturer’s protocol followed by flow cytometry analysis on a FACS Calibur (Becton Dickinson, San Diego, CA, USA). FACS data were analyzed with FlowJo Software (Version X for Windows, FloJo LLC, Ashland, OR, USA).
Monitoring of cellular morphology (Figure 1b) was performed on cytospins from cultures of progenitors or day 4 differentiated HoxB8 cells as well as from freshly isolated primary mouse or human neutrophils. Cytospin slides were incubated with Giemsa (Sigma-Aldrich) solution after methanol fixation (Sigma-Aldrich). Analysis by brightfield microscopy was performed using a Keyence BZ9000 microscope at a magnification of 40× (Keyence, Itasca, IL, USA).
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5

Antibody and Primer Reagents for Flow Cytometry

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Antibodies for flow cytometry, anti-Kit-APC, anti-Mac-1-APC, anti-Gr-1-PE, anti-CD3-APC, and anti-B220-PE, were purchased from BioLegend and used as described [1 (link)]. The manufacturers and catalog numbers for other antibodies and reagents are as follows: anti-PirB-PE, R&D Systems, FAB2754P; pCAMKI, Santa Cruz, sc-28438; anti-pCAMKII, Abcam, ab32678; anti-pCAMKIV, Santa Cruz Biotechnology, sc-28443-R; anti-CAMKI, Abcam, ab68234; anti-CAMKII, Cell Signaling, 4436; anti-CAMKIV, Cell Signaling, 4032; anti-pCREB, Cell Signaling, 9198S; anti-CREB, Cell Signaling, 9197S; anti-actin, Sigma Aldrich, A2066; STO-609, Sigma Aldrich, S1318; KN93, Sigma Aldrich, K1385; The PCR primer sequences were as follows: hCAMKI forward: CGGAGGACA TTAGAGACA, reverse: CTCGTCATAGAAGGGAGG-3; hCAMKIV forward: GATGAAAGAGGCGATCAG, reverse: TAGGCCCTCCTCTAGTTC. PirB forward: GAG AATCACCAGACACATGC, PirB reverse: CTGCCCTCATGTCTTAACTT, mCAMKIV forward: AAGCAGGCGGAAGACATTAGG, CAMKIV reverse: AGTTTCTGAGTCCTCTTGTCCT.
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6

Multimodal Immune Profiling of AML

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We performed flow cytometry, immunohistochemistry, and cytospin as described previously [1 (link), 15 (link), 16 (link)]. For flow cytometry analysis of AML cells, peripheral blood or BM cells were stained with anti-Mac-1-APC, anti-Gr-1-PE, anti-CD3-APC, anti-B220-PE, or anti-Kit-PE monoclonal antibodies (BioLegend). For analysis of apoptosis, indicated AML cells were stained with PE-conjugated anti-annexin V and 7-AAD (BD Pharmingen) according to the manufacturer’s instructions.
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7

Gr1 and CD11b Expression Analysis

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The following monoclonal antibodies were used: anti-Gr1-PE (phycoerythrin) (clone: RB6-8C5, BioLegend, San Diego, CA, USA) and anti-CD11b-FITC (clone: M1/70, BioLegend). Approximately 1 × 106 cells were suspended in FACS buffer (PBS containing 1% bovine serum albumin and 2 mM EDTA). Cells were incubated with fluorophore-conjugated antibodies in the dark at 4 °C for 30 min, washed, and then stained with LIVE/DEAD™ Fixable Far Red dye (Invitrogen, Eugene, OR, USA) following the manufacturer’s protocol. Flow analyses were performed using a FACS Calibur system (Becton Dickinson Immunocytometry Systems, San Jose, CA, USA). IgG-PE and IgG-FITC (BioLegend) were used to distinguish specific stained population. FlowJo V10 software (FlowJo, LLC, Ashland, OR, USA) was used to quantify the percentages of positive events.
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8

Multi-panel Flow Cytometry Analysis

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Cells were analyzed for GFP, PD-1, CD11b, and Gr1 expression by multichannel flow cytometry. Cells were incubated with FcR blocking reagent (Miltenyi, Bergisch Gladbach, Germany) for 10 min at room temperature. Subsequently, cells were incubated with the anti-PD-1-APC (eBioscience, San Diego, CA), anti-CD11b-APC-Cy7 (BioLegend, San Diego, CA) and anti-Gr1-PE (BioLegend, San Diego, CA) or isotype control. The cells were analyzed using FACS Aria (BD Biosciences, San Jose, CA). Kaluza software (Beckman Coulter, Brea, CA) was used to analyze the obtained data.
The expression of IFN-γ was analyzed by intracellular flow cytometry. Cells were pulsed with GolgiStop (1 μg/ml; BD Pharmingen) for 4–6 h at 37 °C before analysis. Cells were next harvested and labeled with CD4-PB and CD8-FITC. Cells were then permeabilized by incubation in Cyto-fix/Cytoperm plus (BD Pharmingen) containing formaldehyde and saponin for 30 min at 4 °C, washed twice in Perm/Wash solution, and incubated with PE-conjugated IFN-γ (Invitrogen, Camarillo, CA), or a matched isotype control for 30 min. Cells were washed in 1 × Perm/Wash solution prior to analysis.
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