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8 protocols using elispot mouse ifn γ elispot set

1

ELISPOT Protocol for IFN-γ Secretion

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ELISPOT was performed according to BD Biosciences manufacturer instructions (BD ELISPOT Mouse IFN-γ ELISPOT Set cod. 551,083). 5 × 105 splenocytes or 2 × 105 PBMCs from pooled samples were counted, plated in each well and stimulated with 10ug/ml of single peptides used for the immunization and incubated for 24-26 h. As negative and positive control, peptide diluents PBS and 5ug/ml of phorbol myristate acetate (PMA, Sigma-Aldrich) were used respectively. Plates were read with an AID EliSpot Reader Systems (AID GmbH, Strassberg, Germany). The results were calculated as spot forming counts as a mean of a duplicate count from the specific antigen stimulation minus the negative control.
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2

IFN-γ ELISpot Assay for Influenza A Virus-Specific CD8+ T Cells

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96-well ELISpot plates (BD ELISPOT Mouse IFNγ ELISPOT Set, BD Biosciences, San Jose, CA) were coated with an IFNγ capture antibody (BD Biosciences) in PBS overnight at 4°C, followed by incubation with complete RPMI-1640 medium for 2 hours at room temperature (RT). Single cell suspensions from selected organs of IAV-infected and uninfected mice were prepared. Red blood cells were removed by hypotonic lysis. Quadruplicate ELISpot wells containing mononuclear cells, were supplemented with the IAV NP peptide (366-374; ASNENMETM) (2 μg/ml), to serve as a H2-Db-restricted epitope from the Influenza A/PR/8/34 nucleoprotein (27 (link), 28 (link)). As a control, medium without added IAV peptide was used. ELISpot plates were incubated at 37°C for 18 hours, washed and incubated with a biotinylated IFNγ detection antibody (BD Biosciences) for 2 hours, followed by incubation with a streptavidin-horse radish peroxidase (HRP) conjugate (BD Biosciences) for 1 hour at RT. ELISpot plates were developed with 3-amino-9-ethyl-carbazole substrate (BD ELISPOT AEC Substrate Set) and dried. Spots were counted using an ImmunoSpot Analyzer.
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3

ELISPOT Assay for IFN-γ Detection

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ELISPOT was performed according to BD Biosciences manufacturer instructions (BD ELISPOT Mouse IFN-γ ELISPOT Set cod. 551083). 5 × 105 splenocytes were counted and plated in each well. Alternatively, 200 μl of whole blood were incubated with ACK lysing buffer for 7 min, washed and resuspended in RPMI medium. Cells were stimulated with 10 ug/ml of single and pool peptide used for the immunization and incubated for 24-26h. As negative and positive control, peptide diluents PBS and 5ug/ml of phorbol myristate acetate (PMA, Sigma-Aldrich) were used respectively. The plates were read with an AID EliSpot Reader Systems (AID GmbH, Strassberg, Germany). The results were calculated as spot forming counts as a mean of a duplicate count from the specific antigen stimulation minus the negative control.
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SARS-CoV-2 Spike RBD Epitope Mapping

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IFNγ ELISpot assays (BD ELISPOT Mouse IFNγ ELISPOT Set, BD Biosciences) were performed according to the manufacturer’s instructions. Briefly, 96-well ELISpot plates were coated with an IFNγ capture antibody (BD Biosciences, 51-2525K) in PBS overnight at 4 °C. Plates were then blocked with complete growth medium for 2 h at room temperature. Wells were then emptied, and 1 × 106 splenocytes from immunized mice were added to the plates. Cells were arrayed in the presence or absence of 15-mer peptides with 11-residue overlaps derived from the SARS-CoV-2 SpikeRBD (10 μg/mL) in 200 μL of complete medium and incubated overnight at 37 °C. Plates were then washed and incubated with a biotinylated IFNγ detection antibody (BD Biosciences, 51-1818KZ) for 2 h at room temperature and incubated with streptavidin-horseradish peroxidase (BD Biosciences) for 1 h at room temperature. Plates were developed with 3-amino-9-ethyl-carbazole substrate (BD ELISPOT AEC Substrate Set) for 5 min to 30 min and dried overnight. Spots were enumerated using the KS ELISpot analysis system (Immunospot).
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5

ELISPOT Quantification of IFN-γ Secreting Cells

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ELISPOT was performed according to BD Biosciences manufacturer instructions (BD ELISPOT Mouse IFN-γ ELISPOT Set cod. 551083). 5x105 splenocytes or 2 x105 tumor infiltrated lymphocytes (TIL) were counted and plated in each well. In brief, tumor biopsies were cut into small fragments ∼2–3 mm in length and subjected to a commercial mechanical/enzymatic dissociation system (GentleMACS, Miltenyi Biotec, Bergish Gladbach, Germany). After disaggregation, the single cell suspension was passed through 70-μm strainers. TIL were isolated from dissociated tumors by CD45 (TIL) MicroBeads (Miltenyi biotec), for positive selection of CD45-specific TIL. Enriched TILs were cultured in complete media (RPMI 1640 (Lonza) supplemented with 10% fetal calf serum (FCS), 1% glutamine, 100 IU ml−1 penicillin, 100 μg ml−1 streptomycin (all from Life Technologies, Paisley, UK).
Both splenocytes and TILs were stimulated with 10ug/ml of single or peptide pool used for the immunization and incubated for 24-26h. As negative and positive control, peptide diluents PBS and 5ug/ml of phorbol myristate acetate (PMA, Sigma-Aldrich) were used respectively. The plates were read with an AID EliSpot Reader Systems (AID GmbH, Strassberg, Germany). The results were calculated as spot forming counts as a mean of a duplicate count from the specific antigen stimulation minus the negative control.
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6

Quantifying IFN-γ-Producing Splenocytes

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ELISPOT was performed according to BD Biosciences manufacturer instructions(BD ELISPOT Mouse IFN-γ ELISPOT Set cod. 551083). 2.5 × 105 splenocytes were counted and plated in each well in duplicate. Cells were stimulated with 2 ug/ml of Trp2 peptide as well as with 5 ug/ml of phorbol myristate acetate (PMA, Sigma-Aldrich) and incubated for 24–26 h. As negative control PBS was used. The plates were read with an AID EliSpot Reader Systems (AID GmbH, Strassberg, Germany). The results were calculated as spot forming counts as a mean of a duplicate count from the specific antigen stimulation minus the negative control.
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7

IFNγ ELISpot Assay for Detecting Antigen-Specific T Cells

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IFNγ ELISpot assays were performed as described.41 (link) Briefly, 96-well ELISpot plates (BD ELISPOT Mouse IFNγ ELISPOT Set, BD Biosciences, San Jose, CA) were coated with an IFNγ capture antibody (BD Biosciences) in PBS overnight (ON) at 4°C, and then plates were blocked with complete medium for 2 h at RT. Peptide or a synTac of known specificity (HPV E7 or IAV NP) was then added to wells, followed by the addition of 2.5 × 105 splenocytes (whole splenocytes to detect antigen-specific CD8 T cells is standard for optimized ELISpot assays),42 (link) 2×104 tumor cells, or 2×104 lung cells depending on the experiment. Positive control wells for all experiments contained 1X Cell Stimulation Cocktail (Invitrogen) prior to the addition of splenocytes or tumor cells, and negative control wells contained media only (Supplemental Figure 10). Plates were then washed and incubated with a biotinylated IFNγ detection antibody (BD Biosciences) for 2 h, followed by SA-HRP (BD Biosciences) for 1 h at RT. The plates were developed with 3-amino-9-ethyl-carbazole substrate (BD ELISPOT AEC Substrate Set) for 5 min and dried for at least 24 h. Spots were enumerated using the CTL ImmunoSpot S6 MACRO Analyzer.
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8

IFNγ ELISpot Assay for Detecting Antigen-Specific T Cells

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IFNγ ELISpot assays were performed as described.41 (link) Briefly, 96-well ELISpot plates (BD ELISPOT Mouse IFNγ ELISPOT Set, BD Biosciences, San Jose, CA) were coated with an IFNγ capture antibody (BD Biosciences) in PBS overnight (ON) at 4°C, and then plates were blocked with complete medium for 2 h at RT. Peptide or a synTac of known specificity (HPV E7 or IAV NP) was then added to wells, followed by the addition of 2.5 × 105 splenocytes (whole splenocytes to detect antigen-specific CD8 T cells is standard for optimized ELISpot assays),42 (link) 2×104 tumor cells, or 2×104 lung cells depending on the experiment. Positive control wells for all experiments contained 1X Cell Stimulation Cocktail (Invitrogen) prior to the addition of splenocytes or tumor cells, and negative control wells contained media only (Supplemental Figure 10). Plates were then washed and incubated with a biotinylated IFNγ detection antibody (BD Biosciences) for 2 h, followed by SA-HRP (BD Biosciences) for 1 h at RT. The plates were developed with 3-amino-9-ethyl-carbazole substrate (BD ELISPOT AEC Substrate Set) for 5 min and dried for at least 24 h. Spots were enumerated using the CTL ImmunoSpot S6 MACRO Analyzer.
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