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First strand cdna synthesis kit

Manufactured by Toyobo
Sourced in Japan, China, United States

The First Strand cDNA Synthesis Kit is a lab equipment product that enables the conversion of RNA into complementary DNA (cDNA). It provides the necessary components and protocols to efficiently synthesize the first strand of cDNA from a variety of RNA templates.

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217 protocols using first strand cdna synthesis kit

1

Quantitative Real-Time PCR Analysis of IL-15 Expression

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Cultured cells were washed with PBS, and total RNA was extracted with an RNeasy® Mini kit (QIAGEN, GER) according to the manufacturer’s instructions. Total RNA was extracted from the epidermal sheets of mouse back skin around a wound using the RNeasy extraction kit (QIAGEN) according to the manufacturer’s instructions. The RNA concentration and quality were measured using a DU800 UV/Vis spectrophotometer (Beckman Coulter, USA), and mRNA was reverse transcribed using First Strand cDNA Synthesis kits (TOYOBO, JPN). Real-time PCR was performed using SYBR Green PCR Master Mix (TOYOBO, JPN) under the following conditions: 95 °C for 2 minutes followed by 50 cycles of 95 °C for 15 seconds, 60 °C for 15 seconds, and 72 °C for 32 seconds. The primers used in this study were as follows:
IL-15:
Forward primer: 5ʹ-GGATTTACCGTGGCTTTGAGTAATGAG-3ʹ
Reverse primer: 5ʹ-GAATCAATTGCAATCAAGAAGTG-3ʹ
GAPDH:
Forward primer: 5ʹ-CGTGCCGCCTGGAGAAAC-3ʹ
Reverse primer: 5ʹ-AGTGGGAGTTGCTGTTGAAGTC-3ʹ
mRNA levels were quantified using the ABI PRISM 7500 Sequence Detection System (Applied Biosystems, Foster City, CA) according to the manufacturer’s protocols. Data were analyzed by the 2-ΔΔ threshold (Ct) method, and GAPDH served as an internal control.
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2

Quantifying TNFRSF11B Expression in MSCs

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To analyze the expression of TNFRSF11B, the OPG encoding gene, BM-MSCs, AT-MSCs, and T-MSCs were harvested and homogenized in TRIzol® (Invitrogen, Carlsbad, CA, USA). Complementary DNA was synthesized using First-Strand cDNA Synthesis Kits (Toyobo, Osaka, Japan) according to the manufacturer's instructions. Real time PCR analysis was performed on a StepOnePlus instrument (Applied Biosystems) using SYBR green (TOYOBO). TNFRSF11B (OPG, 226 bp) was amplified using the primers: 5’-GCGCTCGTGTTTCTGGACA-3’ (forward) and 5’- AGTATAGACACTCGTCACTGGTG -3’ (reverse). The internal control gene GAPDH (192 bp) was amplified using the primers: 5’-GGT AAA GTG GAT ATT GTT GCC ATC AAT G-3’ (forward) and 5’-GGA GGG ATC TCG CTC CTG GAA GAT GGT G-3’ (reverse). The expression of TNFRSF11B was normalized to the expression of GAPDH and Relative fold expression and changes were calculated using the 2-ΔΔCt method.
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3

qRT-PCR Quantification of mRNA

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RNA extracted from cells was DNase treated (Ambion, Austin, TX) and reverse transcribed using First Strand cDNA Synthesis Kit with oligo(dT)20 (TOYOBO, Osaka, Japan). The resulting cDNA was then used as a template for quantitative RT-PCR using THUNDERBIRD SYBR qPCR Mix (TOYOBO) and a LightCycler 2.0 (Roche). Quantified mRNAs were normalized to the ACTB or GAPDH mRNA level.
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4

High-calorie Diet-induced Metabolic Disorder

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Male Sprague Dawley (SD) rats purchased from Chongqing Kechuang Animal Center (Chongqing, China; n=16; weight, ~200 g; aged 4 weeks), cholesterol, sodium cholate (Shanghai Lan Ji Technology Development Co., Ltd., Shanghai, China), TRIzol reagent (Invitrogen; Thermo Fisher Scientific, Inc., Waltham, MA, USA), an Agilent RNA 6000 Nano kit (Agilent Technologies, Inc., Santa Clara, CA, USA), a FlashTag Biotin HSR RNA Labeling kit (Affymetrix; Thermo Fisher Scientific, Inc.), a GeneChip Hybridization Wash and Stain kit (Affymetrix; Thermo Fisher Scientific, Inc.), a First Strand cDNA Synthesis kit (Toyobo Life Science, Osaka, Japan), Taq DNA Polymerase (Thermo Fisher Scientific, Inc.) and a SYBR® Premix Ex Taq™ kit (Takara Bio, Inc., Otsu, Japan) were purchased. The composition of the high-sugar and high-fat diet was as follows: 82.5% common feed, 10% lard, 5% sucrose, 2% cholesterol and 0.5% sodium cholate.
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5

Hypothalamic GnRH mRNA Expression

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The hypothalamus was separated from six sacrificed rats in each group after 30 min of EA as previously described (Cui et al., 2017 (link)). Briefly, two cuts were made transsectionally at the apex of the optic chiasm and the rostral margin of the mammillary bodies, respectively, on the ventral surface of the brain; the other two cuts were placed sagittally on either edge of the mammillary bodies after the middle slab was placed flat; the last cut was placed coronally just ventrally to the third ventricle. Then, the hypothalamus was isolated and was ground in liquid nitrogen immediately. Half of the hypothalamus was used to RNA analysis (the others were used for hormone detection). Total RNA was extracted using Trizol reagent (Invitrogen, Carlsbad, CA, USA) and was reverse transcripted using a First strand cDNA Synthesis Kit (TOYOBO, Osaka, Japan). The primers (Forward: 5′-GGAGGATCAAATGGCAGAACC-3′ and Reverse: 5′-GAAATGCGGAAGCCCACACAA-3′) were applied for detecting GnRH mRNA expression. Rat GAPDH was used as an internal control. The mRNA of GnRH relative to GAPDH levels was quantified with the 2−ΔCt method, where ΔCt = Cttarget gene − CtGAPDH.
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6

Wheat Total RNA Extraction and qPCR Analysis

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Total RNA was extracted from each wheat sample using a Hipure Plant RNA Mini Kit (Magen, Guangzhou, China), according to the manufacturer’s instructions, and stored at −80 °C until use. The first-strand cDNA was synthesized from 1 μg total RNA per 20 μL reaction volume using a First Strand cDNA Synthesis Kit (Toyobo, Kita-ku, Osaka, Japan), according to the manufacturer’s instructions, and as previously described [37 (link)]. The real-time quantitative polymerase chain reaction (RT-qPCR) assay was conducted on an ABI7900HT Sequence Detection System (Applied Biosystems QuantStudio 5, Foster City, CA, USA) using the Hieff qPCR SYBR Green Master Mix (Yeasen, Shanghai, China). At least 3 biological replicates, with 3 technical replicates, were used for each treatment. The relative gene expression levels were calculated according to the 2−ΔΔC(t) method [38 (link)]. In each reaction, the Triticum aestivum cell division cycle (CDC) gene was used as an internal reference gene [35 (link)]. All primers used in RT-qPCR are listed in Table S1.
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7

Quantification of IL-6, JAK2, and STAT3 Expression

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Total RNA was extracted from dorsal spinal cord of each group by using Trizol reagent (Invitrogen, Carlsbad, CA, USA). Subsequently, cDNA was synthesized from 900 ng of total RNA using a First Strand cDNA Synthesis Kit (TOYOBO, Osaka, Japan). The primer sequences of IL-6, JAK2, STAT3 and GAPDH are shown in Table 1. RT-PCR was performed with Step One Plus™ Real-Time PCR System (Applied Biosystems, CA, USA) using SYBER Green RT-PCR kit (Takara Dalian, China). The mRNA of IL-6, JAK2 and STAT3 relative to GAPDH mRNA were quantified with the 2−ΔCt method, where ΔCt = Ct target gene - Ct GAPDH.
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8

Evaluating Slc25a4 knockdown in N2a cells

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N2a cells were transfected with siRNAs for Slc25a4 and collected for RNA isolation. RNA quality was assessed by using a NanoDrop 2000 (Thermo Scientific). The cDNAs were synthesized by ReverTra Ace qPCR RT MasterMix (Toyobo, FSQ-201) or First-Strand cDNA Synthesis Kit (Toyobo, FSK-101). qPCR was performed using SYBR Green Supermix (Bio-Rad, 172–5124).
The primer sets used in this study are listed here: β-actin-F: AGGTGACAGCATTGCTTCTG; β-actin-R: GCTGCCTCAACACCTCAAC; Slc25a4-F: TGATTGTGTCGTGAGAATCCCC; Slc25a4-R: AGAACTGCTTATGGCGATCCA.
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9

Quantitative Analysis of Extracellular Matrix Remodeling

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Total RNA isolation and quantitative RT‐PCR amplification were performed as previously described.17 Briefly, complementary DNA (cDNA) synthesis was performed by using a first Strand cDNA Synthesis Kit (Toyobo, Ōsaka, Japan). cDNA was amplified using specific primers: ADAMTS5, Forward: 5′‐TATGACAAGTGCGGAGTATG‐3′, Reverse: 5′‐TTCAGGGCTAAATAGGCAGT‐3′; MMP3, Forward: 5′‐ATGCCCACTTTGATGATGATGAAC‐3′, Reverse: 5′‐CCACGCCTGAAGGAAGAGATG‐3′; MMP13, Forward: 5′‐GCTGGACTCCCTGTTG‐3′, Reverse: 5′‐TCGGAGCCTGTCAACT‐3′; GAPDH: Forward: 5′‐CTCCCACTCTTCCACCTTCG‐3′, Reverse: 5′‐TTGCTGTAGCCGTATTCATT‐3′;
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10

CSFV E2 Gene Sequencing from Pig Samples

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Ten clinical samples (tonsils, lymph nodes and spleen) were collected from three pig farms in China (Hubei, Guangdong and Guangxi) in 2019. The RNA of clinical samples was isolated by using TRIzol reagent (Invitrogen, Carlsbad, California, USA) in accordance with the manufacturer’s instructions. RNA was then quantified and reverse-transcribed by using a First Strand cDNA Synthesis Kit (TOYOBO, Osaka City, Osaka Prefecture, Japan) in accordance with the manufacturer’s instructions. All samples were amplified by reverse transcription-polymerase chain reaction (RT-PCR) by using previously described specific primers, which were used for the CSFV E2 full-sequence gene [5 (link)]. The amplified gene segments were then ligated into a pEASY®-blunt cloning vector (Transgen Biotech, Beijing, China). Positive clones were sequenced by using Sanger Sequencing Technology and submitted to NCBI (GenBank accession number: MT422346, MT422347, MT422348).
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