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28 protocols using nuclear and cytoplasmic extraction kit

1

Nuclear and Cytoplasmic Fractionation

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Nuclear and cytosolic fractions were separated using the Nuclear and Cytoplasmic Extraction Kit (CWBIO, Shanghai). Cells (1 × 107) were harvested, resuspended in 1 ml of Nc-buffer A and 55 μl of Nc-buffer B, and incubated for 20 min on ice. Cells were then centrifuged for 15 min at 12,000g; the resulting supernatants (containing the cytoplasmic component) and nuclear pellets were used for RNA extraction.
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2

Quantification of GmFT3b Overexpression

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The first trifoliate leaf of GmFT3b-overexpressing seedlings was harvested and conserved under −80 °C. The total soluble proteins were extracted using the plant protein extraction protocol as described previously [50 (link)]. The total nuclear proteins were extracted using the nuclear and cytoplasmic extraction kit (CWBIO, Beijing, China). After protein denaturation, samples were separated by 10% SDS-PAGE and then analyzed by immunoblot using 1:3000-fold dilution anti-GFP mouse monoclonal antibody. In addition, the PVDF membrane was incubated with the One Step Western Kit HRP (CWBIO, Beijing, China). Finally, the immunized proteins were imaged under the Amersham Imager 600 (GE Healthcare, Little Chalfont, Buckinghamshire, UK) machine.
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3

Separation and Extraction of Nuclear and Cytosolic Proteins

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Nuclear and cytosolic proteins were separated using a nuclear and cytoplasmic extraction kit (CWBIO, Beijing, China). HUVECs were briefly washed with cold PBS, followed by dissociation in cold buffer A containing 1% phosphatase inhibitor and protease inhibitor cocktail. The supernatant containing cytosolic proteins was collected after centrifugation at 12,000 rpm for 15 min at a low temperature. Then, the nucleoprotein lysate containing protease inhibitor cocktail was added to the remaining sediment for further cleavage, and the samples were placed on ice for half an hour. Subsequently, the supernatant containing nuclear proteins was transferred to the corresponding test tube after centrifugation at 12,000 rpm for 15 min. The BCA assay kit was used to detect protein concentration according to the provided procedure. Then, the loading buffer was added according to a quarter of the amount of protein solution, followed by boiling for 5 min. The cytosolic and nuclear proteins were preserved at −80 °C until use.
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4

Protein Extraction and Quantification

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Nuclear and cytoplasmic proteins were extracted using a nuclear and cytoplasmic extraction kit (CWbio) according to the manufacturer’s protocol. All protein concentrations were quantified with the BCA method.
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5

Subcellular Fractionation: Cytosol and Nucleus

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Separation of cytosolic and nuclear fractionation was performed using the Nuclear and Cytoplasmic Extraction Kit (CWBIOTECH, Beijing, China), according to the manufacturer's protocol. Cells 1 × 107 were lysed in 1ml Nc-Buffer A incubate on the ice for 20 min. Then add 55 μL Nc-Buffer B incubate on the ice A for 1 min. Samples were centrifuged at 1,2000 rpm for 15 min at 4 ℃. The cytosolic supernatant fraction was collected on ice. The nuclear pellet was resuspend in Nc-Buffer C incubate on the ice for 40 min and centrifuged at 1,2000 rpm for 15 min at 4 ℃. Supernatant fractions were collected and analyzed, or stored at -80 ℃.
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6

Protein Extraction and Western Blot Analysis

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At 48 h after transfection, the cells were lysed, and proteins were extracted and pooled using a Nuclear and Cytoplasmic Extraction Kit (CWBIO, Beijing, China) according to the manufacturer’s instructions. The extracted proteins were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and subjected to western blot analyses using anti-cyclin-dependent kinase (cdk) 2 and anti-p21 and β-actin antibodies (all at 1:500; Abcam, Cambridge, MA, USA). Reactive protein bands were detected by the chemiluminescence method (ECL Plus Western Blot Detection System; Amersham Biosciences, Foster City, CA, USA).
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7

Nuclear and Cytoplasmic Protein Extraction

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After the cells were harvested, the total and nuclear protein was extracted using a Nuclear and Cytoplasmic Extraction Kit (CWbiotech, China). Protein lysate was separated by SDS-PAGE and transferred to PVDF membranes (EMD Millipore), which were blocked with 5% skim milk for 1 h at room temperature. The membranes were then incubated overnight at 4 °C with antibodies as provided in the supplementary tables and further incubated with secondary antibody.
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8

Nuclear Protein Extraction and Western Blot Analysis

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IR-HepG2 cells were treated with GF2 for different points. The nuclear proteins were prepared using a nuclear and cytoplasmic extraction kit (CWbio, Taizhou, China). The total proteins were prepared using a RIPA lysis buffer (50mM Tris pH7.4, 150mM NaCl, 1% NP-40, 0.25% sodium deoxycholate) with Roche complete protease inhibitor and phosphatase inhibitor cocktails (Mannheim, Germany).
The concentration of total protein or nuclear protein was determined using BCA protein assay. The protein was separated by Tris-glycine SDS gels and transferred onto PVDF membranes. Western blot analysis was carried out as described previously [20 (link)].
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9

Nuclear-Cytoplasmic Protein Fractionation

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Nuclear and cytosolic fractions were separated using the Nuclear and Cytoplasmic Extraction Kit (Cwbio, China). A total of 1 × 107 cells were harvested, re-suspended in 1 mL of Nc-buffer A and 55 µL Nc-Buffer B, and incubated for 20 min on ice. Cells were then centrifuged for 15 min at 12, 000 ×g; the resulting supernatants (containing the cytoplasmic component) and nuclear pellets were used for RNA extraction.
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10

Protein extraction and quantification

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Total protein, and cytoplasmic and nuclear proteins were extracted from different treatment groups of HUVECs using RIPA lysis buffer (Cwbiotech, Beijing, China), and Nuclear and Cytoplasmic Extraction Kit (Cwbiotech) respectively according to the manufacturer’s instructions. Protein concentrations were measured using a BCA protein assay kit (Applygen Technologies Inc.), bovine serum albumin as the standard. Western-blot analysis was carried out according to previously described (Hu et al., 2015 (link)).
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