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Revertra ace qpcr rt master mix kit

Manufactured by Toyobo
Sourced in Japan, China

The ReverTra Ace qPCR RT Master Mix kit is a laboratory product manufactured by Toyobo. It is a reagent mixture designed for the reverse transcription and real-time quantitative PCR (qPCR) of RNA samples.

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114 protocols using revertra ace qpcr rt master mix kit

1

RNA Isolation and qRT-PCR Analysis

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Total RNA was isolated using TRIzol (15596026, Invitrogen, USA). One μg total RNA was reversely transcribed in a total volume of 10 μl with ReverTra Ace qPCR RT Master Mix kit (FSQ-201, TOYOBO, Japan) following the vendor’s instructions. The cDNA was diluted 3 times, and 1 μl was used for real-time PCR in a 20-μl reaction using SYBR Green Real Time PCR Mix (204143, Qiagen, Germany). The PCR conditions were 95℃ for 2 min, followed by 40 cycles of 95℃ for 20" and 60℃ for 15". All primers are listed in Supplementary Table S1. The expression of target gene was normalized to that of GAPDH and calculated using the 2−ΔΔCt method.
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2

Evaluating Pluripotency Markers in r-AdMSCs

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The ability of the r-AdMSCs harvested from various sites to express the pluripotency genes was tested using reverse-transcriptase PCR (RT-PCR). Octamer-binding transcription factor 4 (Oct4), embryonic stem-cell-specific homeobox protein (Nanog), SRYbox-containing gene 2 (Sox 2), reduced expression 1 (Rex-1), and telomerase reverse transcriptase (Tert) genes were utilized. To assess the efficacy of PCR, β-actin was employed as a control (Table 2). Total RNA from r-AdMSCs of the third passage from different harvesting sites was isolated using the FastGene RNA Premium Kit (Nippon Genetics, Tokyo, Japan). The quantity and quality of RNA were assessed using a NanoDrop 2000 ultra-micro spectrophotometer (Thermo Fisher Scientific, Cambridge, MA, USA). Then, the cDNA was synthesized via the reverse transcription of 1 µg of RNA (OD260/OD280 ≈ 2.0) by applying the ReverTra Ace™ qPCR RT Master Mix kit (Toyobo Co., Ltd., Osaka, Japan). For PCR amplification, the resultant cDNA was utilized. PCR cycling was accomplished in a Veriti Thermal Cycler (Thermo Fisher Scientific, Waltham, MA, USA) according to [30 (link)]. All examinations were carried out in triplicate. To visualize the PCR products, gel electrophoresis was performed (Figure 7).
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3

Quantifying MTHFD1L gene expression

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We extracted total RNA from the indicated cells using a RaPure Total RNA Micro Kit (Magen, Guangzhou, China). Then, extracted RNA was reverse transcribed with a ReverTraAce qPCR RT Master Mix kit (ToYoBo, Shanghai, China). The qRT-PCR primers for MTHFD1L (5′- CAACATCAAGTGCCGAGCTT-3′; 5′- AAGAGGAACACCAGCCGTTA−3′), GAPDH (5′- TCGGAGTCAACGGATTTGGT−3′; 5′- TTCCCGTTCTCAGCCTTGAC−3′) were purchased from Invitrogen (Shanghai); qRT-PCR was performed with the SYBR Green Real-time PCR Master Mix (ToYoBo, Shanghai, China). The quantification method was -ddCt method.
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4

Quantitative RT-PCR Analysis of Inflammatory and Viral Response Genes

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NRCM (3.0 × 104 cells/well) were incubated at least 24 h before treatment. Total RNA was isolated with a TRI reagent (Sigma, Burligton, MA, USA) from NRCM treated by S protein for 3 h. cDNA was synthesized with a ReverTra Ace qPCR RT Master Mix kit (Toyobo, Osaka, Japan). Quantitative real-time PCR was performed with ABI prism 7500 Real-Time PCR system (Thermo Fisher Scientific, Waltham, MA, USA) and KAPA SYBR FAST qPCR kit (Roche, Basel, Switzerland). TNF-α primers were forward 5′- AAATGGGCTCCCTCTCATCAGTTC-3′ and reverse 5′- TCTGCTTGGTGGTTTGCTACGAC-3′ [61 (link)]. IL-1β primers were forward 5′-CACCTCTCAAGCAGAGCACAG-3′ and reverse 5′-GGGTTCCATGGTGAAGTCAA-3′ [61 (link)]. IL-6 primers were forward 5′-TCCTACCCCAACTTCCAATGCTC-3′ and reverse 5′-TTGGATGGTCTTGGTCCTTAGCC-3′ [61 (link)]. ACE2 primers were forward 5′- GCAGATGGCTACAACTATAACCG-3′ and reverse 5′-C CCTCCTCACATAGGCATGAAGA-3′. A total of 18 s rRNA amplification were forward 5′-ATTAATCAAGAACGAAAGTCGCAGGT-3′ and reverse 5′-TTTAAGTTTCAGCTTTGCAACCATACT-3′. Data were normalized with 18 s rRNA.
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5

Transcriptome Analysis of Olive Flounder Tissues

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Total RNA was extracted from ten tissues of olive flounder (spleen, gill, muscle, kidney, intestine, stomach, liver, fin, brain, and testis) using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) depending on the manufacturer’s instructions. These RNAs were treated with RNase-Free DNase I (New England Biolabs, Beverly, MA, USA) to remove genomic DNA contamination. RNAs were separated by 1% agarose gel electrophoresis for analysis of the 28S and 18S RNA bands. The RNA concentration was quantified to 500 ng using a ND-1000 UV-Vis spectrophotometer (Nano Drop, Wilmington, DE, USA). ReverTra Ace qPCR RT Master Mix kit (TOYOBO, Osaka, Japan) was used for cDNA synthesis. Prior to use, a 1 in 50 volume of gDNA remover was added to 4× DN Master Mix and then each quantitated 500 ng RNA samples 6 μL denatured at 65℃ for 5 min. Then, 2 μL of 4× DN Master Mix was added to RNA in order to increase DNase I reaction and incubated at 37℃ for 5 min. After that, 2 μL of 5× RT Master Mix was added to 4× DN Master Mix. Reverse transcription response was performed by following steps; incubation at 37℃ for 15 min, 50℃ for 5 min, heating 98℃ for 5 min and stored the solutions at ‒20℃.
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6

Quantification of Glioblastoma Cell Gene Expression

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Total RNA was isolated from GBM cells using the RNA-Quick Purification Kit (Shanghai YiShan Biotechnology; Shanghai, China) according to the manufacturer's protocol. Reverse transcription was conducted using the ReverTra Ace qPCR RT Master Mix Kit (FSQ-101, TOYOBO; Osaka, Japan), and cDNA was used as the template in real-time fluorescence quantification. RT-qPCR was performed with the hot start reaction mix SYBR Green Master (Roche; Basel, Switzerland) on a Real-Time PCR Detection System (Roche 480II). Independent experiments were conducted in triplicate, and ACTB served as an internal control. The following primers were used:
TREM-1: F 5′-TTTGTTTCCCAGTCTGTGTGC-3′, R 5′-TCCCCTATTCTCCATCACCACT-3′; ACTB: F 5′-CATGTACGTTGCTATCCAGGC-3′, R 5′- CTCCTTAATGTCACGCACGAT-3′; CD206: F 5′-CGAAATGGGTTCCTCTCTGGT-3′, R 5′-TTTATCCACAGCCACGTCCC-3′; CD163: F 5′-GTAGTCTGCTCAAGATACACAGAA-3′, R 5′-GCGTTTTGAGCTCCACTCTG-3′; IL1B: F 5′-TGATGGCTTATTACAGTGGA-3′, R 5′-GGTCGGAGATTCGTAGCTGG-3′; CSF1: F 5′-CTCCAGCCAAGATGTGGTGA-3′, R 5′-TCAGAGTCCTCCCAGGTCAA-3′; CSF2: F 5′-AGCCCTGGGAGCATGTGAAT-3′, R 5′-GCAGCAGTGTCTCTACTCAGG-3′; IL6 F 5′-CCTGAACCTTCCAAAGATGGC-3′, R 5′-TTCACCAGGCAAGTCTCCTCA-3′; CXCL: F 5′-TGTGAAGGTGCAGTTTTGCC-3′, R 5′-GGGGTGGAAAGGTTTGGAGT-3′; TGF-α: F 5′-GTTGTAGCAAACCCTCAAGCTG-3′, R 5′-GAGGTACAGGCCTCTGATG-3′; VEGFA: F 5′-AAAACACAGACTCGCGTTGC-3′, R 5′-CCTCGGCTTGTCACATCTGC-3′.
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7

Quantitative Real-Time PCR Assay

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Total RNA from tissues and cells were extracted using Trizol reagent (Invitrogen). Total RNA (1 μg) was reversely transcribed using ReverTra Ace Qpcr RT Master Mix kit (TOYOBO). Real-time PCR reactions were performed using FastStart Universal SYBR Green Master (Rox) (Roche). Relative mRNA level was calculated by normalization to GAPDH. The sequences of primers for quantitative real-time PCR will be provided upon request.
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8

Quantification of Mouse Lung mRNA Levels

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Mouse lung tissues were homogenized using a T10 Basic Ultra-Turrax homogenizer (IKA Labortechnik, Staufen, Germany) and lysed in Trizol reagent (Invitrogen, Carlsbad, CA) according to the manufacturer’s instructions. Relative mRNA expression levels were measured by reverse transcription and real-time PCR; 1 µg of total RNA was synthesized to cDNA by reverse-transcription with a ReverTra Ace qPCR RT Master Mix Kit (Toyobo, Osaka, Japan). Real-time PCR was performed in 20 µl reactions containing 10 µl Power SYBR Green® PCR Master Mix (Applied Biosystems, Waltham, MA), 1 µl cDNA template, 1 µl forward primer, 1 µl reverse primer, and deionized water to bring to the desired volume. Quantitative PCR was performed with the StepOnePlus™ Real-Time PCR System (Applied Biosystems, Waltham, MA) according to the manufacturer’s protocol. Primer pairs for real-time PCR were manufactured by MBiotech (Hanam, South Korea). The levels of mRNA were normalized to IPO8. Fold changes were calculated using the 2− Δ ΔCT method.
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9

Quantitative Real-Time PCR Analysis of Yeast Gene Expression

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Total RNA was isolated using a yeast total RNA extraction kit (Sangon Biotech Co. Shanghai, China). Isolated RNA was treated with RNase-free DNase I (Toyobo, Osaka, Japan) and cDNA was synthesized using the ReverTra Ace qPCR RT Master Mix kit (Toyobo, Osaka, Japan) as described (Wang et al., 2018 (link)). Real-time PCR was conducted on a Bio-Rad iCycler iQ (Bio-Rad, Hercules, CA, United States) using the THUNDERBIRD SYBR qPCR mix kit (Toyobo, Osaka, Japan). The primers for KmYME and the ACT1 internal control are shown in Additional File 1: Supplementary Table S1. The cycle threshold values (CT) were determined and the relative fold differences were calculated using the 2–ΔΔCT method (Nolan et al., 2006 (link)) with ACT1 as the endogenous reference gene. The fold change was shown as the sign of the log2 transformed fold change (FC) values (log2 FC).
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10

Quantitative Real-Time PCR Assay for Gene Expression

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Total RNA was isolated using Agilent Total RNA Isolation Mini kit to the manufacturer’s instructions. Total 500 ng of RNA was reverse transcribed into cDNA using ReverTra Ace qPCR RT Master Mix kit (FSQ-201; TOYOBO). The relative mRNA expression levels were determined using real-time quantitative PCR by THUNDERBRID SYBR qPCR Mix (QPS-201; TOYOBO). Relative mRNA expression levels were determined by the ddCt method. Beta-actin was used as reference internal standard. The qPCR primers were picked up from published papers (Plotkin et al., 2014 (link); Luo et al., 2017 (link); Jerónimo-Santos et al., 2015 (link); Kursan et al., 2017 (link)), the sequence described as follow: TrkB FL: 5′-AAG​GAG​CCT​TCG​GGA​AAG​TT-3′ (forward), 5′-GAA​AGT​CCT​TGC​GTG​CAT​TG-3′ (reverse), TrkB T1: 5′-CAC​TGG​ATG​GGT​AGC​TGA​GAT​A-3′ (forward), 5′-TGC​AGA​CAT​CCT​CGG​AGA​TT-3′ (reverse), KCC2: 5′-TGC​CCA​GAA​GTC​TAT​CCC​TAC-3′ (forward), 5′-CAC​CAA​GTT​GCC​ATT​CAC​AG-3′ (reverse), PARP1: 5′-TGG​TTT​CAA​GTC​CCT​TGT​CC-3′ (forward), 5′-TGC​TGT​CTA​TGG​AGC​TGT​GG-3′ (reverse), KIF4: 5′-GAG​CAC​ACT​AAA​ATG​TCA​GGA​GG-3′ (forward), 5′-CTG​TTT​GCT​GGC​TAC​TTG​GAG-3′ (reverse), Act: 5′-AGC​CAT​GTA​CGT​AGC​CAT​CC-3′ (forward), 5′-CTC​TCA​GCT​GTG​GTG​GTG​AA-3′ (reverse).
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