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4 protocols using griffonia simplicifolia isolectin b4

1

Retinal Vasculature and Microglial Analysis

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OIR-mice at P17 were euthanized and perfused successively with PBS and 4% PFA, and the intact retinas were collected. Retinas were blocked and permeabilized in PBS containing 10% goat serum and 1% Triton-X-100 (Sigma-Aldrich) for 30 min. Endogenous Fc receptors and IgG were blocked with rat anti-mouse CD16/CD32 (Mouse BD BlockTM, 1:50, BD Biosciences, 553142) and the blocking reagent provided in the mouse-on-mouse kit (Vector Laboratories, Cat. No. FMK-2201, Burlingame, CA, USA), respectively. Retinas were then incubated with primary antibodies against mouse Adora2a (1:100, Millipore, 05-717), rabbit IBa1 (1:400, Sakura Finetek, 019-19741, Torrance, CA), and Alexa488- or Alexa-594 labeled Griffonia simplicifolia isolectin B4 (1:200, Invitrogen, 121411 and 121413, Carlsbad, CA, USA) overnight at 4 °C, followed by incubation with fluorescence-conjugated cross-adsorbed secondary antibody (1:500, Molecular Probes, Life Technologies, A-21131, Carlsbad, CA,USA) for 1 hour, and then counterstained with DAPI (Invitrogen). Retinas were flat mounted on microscope slides in mounting medium (Vectashield; Vector Laboratories) and examined by confocal microscopy (Zeiss 780; Carl Zeiss, Jena, Germany). Areas of vaso-obliteration and vitreoretinal neovascular tufts were quantified using Adobe Photoshop CS 5 software.
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2

Quantifying Retinal Vascular Changes in OIR Mouse Model

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Both vaso-obliteration and pathological neovascularization in the OIR mouse retinas were quantified at P17, as previously described.57 (link) Briefly, the eyes were fixed with 4% paraformaldehyde dissolved in PBS at room temperature for 1 hour, and the retinas were dissected for overnight incubation with fluorescent Griffonia simplicifolia isolectin B4 (Invitrogen, Thermo Fisher Scientific) and flat mounted. Images of retinal whole mounts were examined by fluorescence microscope (Zeiss AxioOberver.Z1; Carl Zeiss, Oberkochen, Germany). Vascular loss and neovascular areas in OIR were quantified by using Adobe Photoshop (Adobe Systems, San Jose, CA, USA) and ImageJ (NIH, Bethesda, MD, USA; https://imagej.nih.gov/ij/). Vascular density in the developing retinas was analyzed, using the Vessel Analysis plugin with Fiji.61 (link) Researchers performing quantification of retinal vessels were masked to the identity of samples; n represents the number of eyes quantified.62 (link)
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3

Molecular Markers in Cell Cycle Regulation

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The antibodies targeting GAPDH (cat. no. 10494-1-AP), CD31 (cat. no. 11265-1-AP), cyclin A1 (cat. no. 13295-1-AP), cyclin B1 (cat. no. 55004-1-AP), cyclin D1 (cat. no. 60186-1-1 g), cyclin E1 (cat. no. 11554-1-AP), CDK1 (cat. no. 19532-1-AP), CDK2 (cat. no. 10122-1-AP), poly (ADP-ribose) polymerase (PARP)1 (cat. no. 13371-1-AP), p21 (cat. no. 10355-1-AP) and p53 (cat. no. 10442-1-AP) were purchased from Proteintech Group, Inc. DMEM, fetal bovine serum (FBS), DAPI, TRIzol®, Super Signal West Pico chemiluminescent substrate, and HRP-(cat. no. A-10677), FITC-(cat. no. A-10683) and Alexa Fluor555-conjugated secondary antibodies (cat. no. A-27017) were obtained from Thermo Fisher Scientific, Inc. Propidium iodide (PI) was obtained from Beyotime Institute of Biotechnology. The PrimeScript RT kit and SYBR Premix were purchased from Takara Biotechnology Co., Ltd. (Dalian, China). The Annexin V-FITC apoptosis kit was purchased from eBioscience (San Diego, CA, USA). Griffonia simplicifolia isolectin B4 was purchased from Invitrogen (Thermo Fisher Scientific, Inc.). Matrigel Matrix was purchased from BD Transduction Laboratories (Shanghai, China). The EdU staining kit was obtained from Guangzhou RiboBio Co., Ltd. (Guangzhou, China). Bovine serum albumin was obtained from Weiao Bio (Shanghai, China).
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4

Retinal Vascular Development Quantification

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OIR was generated as described previously (24 (link)). Retinas were isolated at postnatal day (P)16 for RNA or protein analyses. Flat-mounted retinas were stained with fluorescent Griffonia simplicifolia isolectin B4 (Invitrogen, Carlsbad, CA). Vaso-obliteration and neovascularization in the retina were quantified by Adobe Photoshop and ImageJ software, according to a documented method (25 (link)).
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