An adaptation of the published assay (
33 (
link)) was used. HeLa cells were transfected with Str-KDEL-TNF-SBP-mCherry construct as described above, and 24 hours after transfection, mCherry-positive cells were sorted. A total of 5 × 10
4 cells were cultured on 35-mm imaging dish. The day after, cells were transferred at 37°C in a thermostat-controlled chamber. At time point zero, the medium was removed and replaced with medium containing
d-biotin (Sigma-Aldrich) at 40 μM concentration. The time-lapse acquisition was made using a Zeiss
LSM800 AiryScan Elyra S1 SR confocal microscope. Images were acquired using a 63× oil objective. For each time point, the integrated intensity of an ROI was measured. The integrated intensity of an identical-size ROI corresponding to background was measured and subtracted from the values of the integrated intensity for each time point. The values were then normalized to the maximum value. These quantifications were performed using the Zeiss Black software.
Kerselidou D., Dohai B.S., Nelson D.R., Daakour S., De Cock N., Hassoun Z.A., Kim D.K., Olivet J., El Assal D.C., Jaiswal A., Alzahmi A., Saha D., Pain C., Matthijssens F., Lemaitre P., Herfs M., Chapuis J., Ghesquiere B., Vertommen D., Kriechbaumer V., Knoops K., Lopez-Iglesias C., van Zandvoort M., Lambert J.C., Hanson J., Desmet C., Thiry M., Lauersen K.J., Vidal M., Van Vlierberghe P., Dequiedt F., Salehi-Ashtiani K, & Twizere J.C. (2021). Alternative glycosylation controls endoplasmic reticulum dynamics and tubular extension in mammalian cells. Science Advances, 7(19), eabe8349.