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23 protocols using jnj 38877605

1

HGF and c-MET Inhibitor Signaling Pathway Analysis

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Human recombinant HGF was purchased from GenScript (Nanjing, China). The c-MET kinase inhibitors JNJ38877605 and rapamycin (RAPA) were obtained from Selleckchem (Houston, TX). Antibodies used include c-MET mAb, p-MET (Tyr1234/1235) mAb, Notch mAb, HES-1 mAb, and GAPDH mAb. Antibodies used in this study include c-MET mAb, p-MET (Tyr1234/1235) mAb (Abcam, U.S.A.), Notch mAb (Abcam, U.S.A.), HES-1 mAb (Abcam, U.S.A.), GAPDH mAb (Abcam, U.S.A.), Anti-mouse IgG (Abcam, U.S.A.), anti-CTLA4, #EPR1476 (Abcam, U.S.A.) and anti-human IgG4(Abcam, U.S.A.). All antibodies were purchased from Cell Signaling Technology, Inc.
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2

Characterization of HNSCC Cell Lines

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The HNSCC cell lines (SCC9, SCC15, CAL27, SCC25 and MDA1386) were obtained, characterized, grown in media and condition as previously described (24 ). All of the cell lines have been authenticated by short tandem repeat profiling within six months of passage. The phospho-receptor tyrosine kinase array was purchased (ARY001B, R&D Systems, Minneapolis, MN). The array layout of the 49 RTKs were shown in the Supplemental Figure (Fig. S5). The following small molecular TKIs were purchased (Selleck Chemicals): (1) JNJ-38877605, a highly selective, ATP-competitive inhibitor of c-MET (25 (link)); (2) NVP-AEW541, a potent inhibitor of IGF-1R with IC50 of 86 nM (26 (link)); (3) OSI-744/erlotinib HCl, a FDA approved EGFR inhibitor and (4) STI-571/imatinib, a multi-target inhibitor of v-Abl, c-Kit and PDGFR. The TKIs were reconstituted in DMSO solvent as per manufacture recommendation.
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3

Assessing c-Met Signaling Inhibition

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A549 or MHCC-97 H cells were plated in 6-well plates and incubated overnight at 37°C and 5% CO2. The cells were incubated with 100 nM of diabody-mp, diabody-pm, anti-c-Met mAb, and JNJ-38877605 (Selleckchem, TX, USA) at 37°C for 2 hr. They were stimulated with or without 1 nM of HGF (GenScript, Nanjing, China) before collection and lysed with RIPA cell lysis buffer (Meilun, Dalian, China). Equal amounts of cell lysate were subjected to 10% SDS-PAGE. Immunoblotting was performed with primary antibodies against c-Met (ProteinTech, #25869-1-AP), Phospho-Met (Tyr1234/1235) (CST, #3077), Akt (CST, #4691), phospho-Akt (Ser473) (CST, #4060), p44/42 MAPK (CST, #4695), Phospho-p44/42 MAPK (Thr202/Tyr204) (CST, #4370), and GAPDH (CST, #5174) overnight at 4°C. HRP-conjugated secondary antibodies (CST, MA, USA) were incubated at room temperature for 1 hr.
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4

CCK-8 Assay for HLEC Proliferation

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Cell Counting kit-8 (CCK-8) assays (Dojindo Molecular Technologies, Inc., Kumamoto, Japan) were used to evaluate the proliferation of HLECs. HLECs induced by rhHGF (PeproTech, Inc., Rocky Hill, NJ, USA) or JNJ-38877605 (400 nM; Selleck Chemicals, Houston, TX, USA) were seeded in 96-well plates (2,000 cells/well, 100 µl) and incubated at 37°C for 12 or 24 h. For rhHGF, the blank control was the culture medium without cells. The negative control used the vehicle, deionized water for rhHGF and DMSO for JNJ-38877605. Cells were incubated with 10 µl CCK-8 for 2 h, and optical density (OD) was, measured at 450 nm using Varioskan Flash microplate reader (Thermo Fisher Scientific, Inc.).
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5

Antibody Characterization and Compound Acquisition

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Commercially available antibodies used in this study were listed in Supplementary Table 2. A polyclonal anti-PLEKHA5 antibody was generated as described previously24 (link). PHA-665752, crizotinib (PF-2341066), saracatinib (AZD0530), AG1478, and JNJ-38877605 were purchased from Selleck Chemicals. Anisomycin and 2-deoxyglucose were purchased from Wako Chemicals. Doxorubicin and Nutlin-3 were purchased from Sigma-Aldrich and Cayman Chemical, respectively.
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6

Comprehensive Cancer Cell Panel Experiments

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The cell lines used in experiments included MFE-296, HEC50B, DU4475, BT-474, HCC1954, MDA-MB-468, SK-OV-3, KM12, HCC2998, SW480, HCT15. They were obtained through the MD Anderson Characterized Core Cell Line Facility and the MDACC CRC Moon Shot program. Cell lines were authenticated by fingerprinting using short tandem repeat testing. The absence of mycoplasma contamination was also verified. Cells were maintained in RPMI-1640 supplemented with 10% heat-inactivated FBS and 1% penicillin with streptomycin. The targeted compounds (PARP inhibitor – Olaparib, Chk2 inhibitor – BML-277, AKT inhibitor MK-2206, MET inhibitor – JNJ-38877605, HER2 inhibitor – Neratinib, AURKA inhibitor – Alisertib, CDK4/6 inhibitor – Ribociclib, MAP3K4 inhibitor – Doramapimod (directly inhibiting downstream signaling partner, p38/MAPK14), PIK3CA inhibitor – Buparlisib) were obtained from Selleckchem.
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7

Inhibition of MET Signaling in Cancer Cells

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Hek293T cells and the human breast carcinoma TNBC BT-549 cell line were purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA) and cultured in Iscove and RPMI, respectively. The media were added with 10% of FBS, 1% of penicillin, 1% of streptomycin, and 1% of L-glutamine. All reagents, unless specified, were from Sigma Aldrich (St. Louis, MO, USA). HGF (recombinant human HGF NS0-expressed) was purchased from R&D systems (Minneapolis, MN, USA). Cells were tested for mycoplasma one time per week. MET tyrosine kinase inhibitor JNJ-38877605 (JNJ) was purchased from Selleckchem (Houston, TX, USA). Bafilomycin A (Baf, vacuolar-type H+-ATPase), 3-methyladenine (3-MA, inhibitor of class III PI3K Vps34), and temsirolimus (Tem, mTOR inhibitor) were purchased from Sigma Aldrich.
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8

Establishment and Characterization of Osimertinib-Resistant Cell Line

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The KNZ_OR cell line was established from a bone metastatic tumor at C7 that was intrinsically resistant to Osimertinib in the patient with EGFR‐mutated lung cancer and plasma EGFR‐T790M. The cells were maintained and cultured in ACL4 medium (Thermo Fisher Scientific Inc) supplemented with 10% FBS, penicillin (100 U/mL), and streptomycin (50 µg/mL) in a humidified CO2 incubator at 37°C. H3255 and PC‐9 cells have an EGFR‐L858R point mutation and exon 19 deletion, respectively. These two cell lines were cultured in RPMI‐1640 supplemented with 10% FBS, penicillin (100 U/mL), and streptomycin (50 µg/mL) in a humidified CO2 incubator at 37°C. Mycoplasma infection of these cells was regularly monitored using the MycoAlert Mycoplasma Detection Kit (LONZA). Cell lines were authenticated by short tandem repeat analysis at the National Institute of Biomedical Innovation in May 2015. Osimertinib, gefitinib, crizotinib, golvatinib, JNJ38877605, and foretinib were purchased from Selleck Chemicals.
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9

Tivantinib and MET Signaling Inhibitors

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Tivantinib, JNJ-38877605 and PHA-665752 were purchased from Selleck Chemicals (Houston, TX, USA) and prepared as 20 mM stock solutions in DMSO (Sigma-Aldrich, St. Louis, MO, USA). For in vivo experiments, Tivantinib and JNJ-38877605 were dissolved as previous described and administered via oral gavage at a dose of 10 ml/kg [21 (link), 27 (link)]. Paclitaxel and vincristine were purchased from Sigma-Aldrich (St. Louis, MO). Primary antibodies against MET, phospho-MET (Tyr1234/1235), AKT, phospho-Akt (Ser473), ERK1/2, phospho-ERK1/2 (Thr202/Tyr204), α-tubulin, Cdc25C, Cylin B1, p21, FasL, Fas and horseradish peroxidase (HRP)-conjugated secondary antibodies were obtained from Cell Signaling Technology (Beverly, MA, USA). The antibody against Ki-67 was purchased from Dako (Santa Barbara, CA, USA). The cleaved caspase antibody sampler kit and GSK3 antibody sampler kit were purchased from Cell Signaling Technology (Beverly, MA). The antibody against GAPDH was a product of Kangchen Biotech (Shanghai, China). Cell Counting Kit-8 (CCK-8) was purchased from Dojindo Molecular Technologies Inc. (Kumamoto, Japan).
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10

Generating MET-Targeted Drug-Resistant Cell Lines

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To establish MET-targeted drug-insensitive cell lines, 1 × 106 HepG2 cells were individually treated with a single dose of 50 nM MET-specific small molecule inhibitor JNJ-38877605 (Selleck Chemicals, S1114) and 40 μg/ml anti-MET monoclonal antibody (Alphamab, 5D5) for 3 d. After treatment, the surviving population of HepG2 cells was cultured in normal growth medium for 3 d to avoid the therapeutic stress-mediated artificial effects. The recovered HepG2 cells were treated again with JNJ-38877605 and 5D5 as above for the other 2 rounds of selection. The concentration of JNJ-38877605 and 5D5 used to select out the insensitive cell line was based on clinical reports to apply a degree of clinical relevance to this in vitro study. To assess the resistance of MET-targeted drug-insensitive cell lines, cells were plated at a concentration of 1 × 103 cells per well in triplicate wells of 6-well tissue culture plates. Six h after plating, the triplicate wells were treated with JNJ-38877605 (0–100 nM) and 5D5 (0–80 μg/ml) for 3 d, and then subjected to cell proliferation, viability and colony formation assays as described. The resistant cells were incubated in very low concentrations of drugs to maintain their resistance in cell culture, but the drugs were withdrawn in formal experiments.
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