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11 protocols using cd25 fitc

1

Flow Cytometry Immunophenotyping Protocol

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For flow cytometry, the following fluorochrome-conjugated monoclonal antibodies were used. BD Biosciences: HLA-DR-APC (Clone: G46-6), CD86-FITC (Clone: FUN-1), CD80-PE (Clone: L307.4), CD54-APC (Clone: HA58), CD25-FITC (Clone: M-A251), CD127-BV421 (clone HIL-7R-M21), IFN-γ-FITC (Clone: 4S.B3), IL-4-PE (Clone: MP4-25D2); eBioscience: FoxP3-APC (Clone: 236A/E7), IL-17A-PE (Clone: Ebio64cap17); Beckman Coulter: CD40-PE (Clone: MAB89); Biolegend: CD4-PerCP (Clone: SK3). Cell viability was detected using the fixable viability dye eFluor 506 (eBioscience).
Antigen affinity-purified polyclonal anti-human TLR4 goat IgG was purchased from R&D systems. Cytokines (recombinant human granulocyte-macrophage colony-stimulating factor and IL-4), MicroBeads (CD14 and CD4) and cell purification units were obtained from Miltenyi Biotec. Protein-A agarose beads were from Cell Signalling Technology, and E. coli 055:B5 LPS and Polymyxin B-conjugated agarose beads were from Sigma-Aldrich. TLR4 signaling inhibitor CLI-095 and CpG ODN 2006 were procured from InvivoGen.
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2

Multiparameter Flow Cytometry Analysis

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The cells were divided into several groups and then stained with fluorophore-conjugated antibodies, including CD11b-FITC or BV421 (eBioscience), Gr-1-PerCP Cy5.5 or APC (eBioscience), CCR5-APC or PE (BioLegend, CA, USA), CD45-AmCyan (BioLegend), CD4-PE (eBioscience), and CD25-FITC (eBioscience) for 30 min at 4°C in staining buffer (PBS with 10% FBS). CCL5-PE/Cyanine7 (BioLegend), Foxp3-APC (eBioscience), and interferon-gamma (IFN-γ)-FITC (eBioscience) were used for intracellular staining after culturing with fixation/permeabilization medium (eBioscience). Data were acquired through FACS AriaIII (BD Biosciences) and analyzed with FlowJo X (BD Biosciences).
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3

Glycocalyx and Lymphocyte Phenotyping

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Cells were characterized by flow cytometry using the monoclonal antibodies (mAbs) CD11b/c-APC, CD80-PE, CD86-PE, MHCI-FITC, and MHCII-PE (BioLegend, San Diego, CA, USA). For analysis of the glycocalyx, lectins from Maackia amurensis (MAL II, indicating α2-3 Sia) and Sambucus nigra (SNA-I, indicating α2-6 Sia) were used (Vector Labs). Lectins were biotin conjugated. PE-streptavidin was used for detection. Negative controls for non-specific fluorescence were used, these consisted of PE-streptavidin staining solutions in the absence of the lectin conjugated to biotin. Lectins were prepared in lectin staining buffer (PBS containing 1% FBS, 1 mmol/L CaCl2, and 2 mmol/L MgCl2) and resuspended in FACS buffer (PBS containing 2% fetal calf serum and 0.01% NaN3, all from Sigma-Aldrich) before analysis using a FACS Canto II (BD Biosciences, Oxford, UK).
For analysis of the assays involving lymphocytes from the lymph nodes and spleen, the following mAbs were used CD3/PE, CD8/PE-Cy7, CD4/APC (BioLegend), and CD25/FITC (eBioscience, San Diego, CA, USA). Prior to staining, cells were washed with FACS buffer. mAbs were diluted in 50 µL FACS buffer, added to the cells, and incubated for 15 min at 4°C. To remove any unbound antibodies, the cells were washed three times with FACS buffer. The cells were then filtered through a nylon mesh (40 µm) before analysis in the cytometer.
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4

Lymphocyte Subpopulation Analysis

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Cells were counted using trypan blue exclusion and stained using the following panel: CD3-APC (Ebioscience, San Diego, CA), CD4-PacOrange (Life Technologies Carlsbad, CA) or CD4-PE (Ebioscience), CD25-FITC (Ebioscience, San Diego, CA). Staining was performed in 50 µl of Facs Buffer (PBS+1% FBS+2 mM EDTA). Cells were washed once and fixed with freshly made 4% paraformaldehyde. Samples were run on a FACSCalibur (BD, San Diego, CA) and data were analyzed using FlowJo software (Treestar Inc. Ashland, OR).
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5

Multicolor Flow Cytometric Analysis of Immune Cell Subsets

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Three-color immunostaining of cell surface and intracellular markers was performed utilizing the Accuri C6 flow cytometer. Isolated splenocytes were stained for CD11b-PE, Gr1-APC, and F480-FITC to evaluate MDSCs; CD3-PE, CD8-FITC, and Granzyme-B-PECy7 (intracellular) to evaluate CD8 cells; and CD4-APC, CD25-FITC, and FoxP3-PE (intracellular) to evaluate Treg cells (eBio-science). Before intracellular staining, cells were fixed and permeabilized using the FoxP3 Fix/Perm Buffer Set solution (eBioscience). Tumors from mice were morselized into a single cell suspension to evaluate tumor-infiltrating lymphocytes and probed using APC-conjugated anti-mouse antibody directed against CD4 with isotype control (mouse IgG) and PE-conjugated anti-mouse mAb directed against CD8 with isotype control (mouse IgG1) (eBioscience).
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6

Immunophenotyping of Differentiating Cells

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For differentiation of differentiating cells, cells were harvested, washed and stained with the following antibodies: CD44-APC (BD, IM7), CD25-FITC (eBioscience, PC61.5), CD93-APC (eBioscience, AA4.1), B220-FITC (BD, RA3–6B2), CD19-APC (eBioscience, 1D3), IgM-PE (eBioscience, eB121–15F9), B220-APC (eBioscience, RA3–6B2), Thy1.2-FITC (eBioscience, 30-H12), CD135-APC (BioLegend, A2F10), CD127-PE (eBioscience, A7R34), BP-1-PE (eBioscience, 6C3), CD24-APC-Cy7 (eBioscience, M1/69), CD43-APC (BioLegend, S11). For intracellular staining, cells were permeabilized using 0.05 % saponin and stained with antibodies against CD79a-APC (BioLegend, F11–172), CD79b-FITC (BioLegend, HM79–12), CD179a-BV421 (BioLegend, R3), CD179b-BB700 (BioLegend, LM34). For the Bcl-2-specific stain, the Foxp3 staining kit (ThermoFisher) was used. As antibody, Bcl-2-AF647 (BioLegend, 10C4) was used. Analysis was carried out using a FACS Canto II cytometer (Beckton Dickinson).
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7

Comprehensive Splenocyte Profiling in Mice

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At the indicated time points, mice were sacrificed and splenocyte phenotypes were characterized by their cell surface markers using fluorescently labeled monoclonal antibodies (mAbs) and analyzed by flow cytometry. Cells were stained with the following mAbs from eBioscience (San Diego, CA, USA): CD11b-FITC (clone: M1/70), CD11b-PE (clone: M1/70), Gr-1-PE (clone: RB6-8C5), CD4-APC (clone: RM4-5), CD4-PE (clone: H129.19), CD8-FITC (clone: 53-6.7), CD49b-PE (clone: Dx5), CD44-PE (clone: IM7), CD62L-FITC (clone: MEL-14), CD69-FITC (clone: H1.2F3), CD25-FITC (clone: CD25-4E3), Foxp3-APC (clone: MF23), F4/80-FITC (clone: BM8), CD274-PE (clone: MH5), and CD206-APC (clone: C068C2). Isotype-matched controls were run in parallel. Cell debris was eliminated by forward- and side-scatter gating. The samples were acquired on a FACSCalibur cell sorter (Becton Dickinson, Mountain View, CA, USA) and data were analyzed using WinMDI ver. 2.9 (Biology Software Net: http://en.bio-soft.net/other/WinMDI.html).
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8

Isolation and Transfer of Regulatory T Cells

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Untouched CD4 T-cells were isolated using the Dynal negative isolation kit (Life Technologies Carlsbad, CA) according to manufacturer’s instructions, then stained using CD4-APC (Ebioscience, San Diego, CA), CD45RB-PE (BD Biosciences, San Jose, CA), CD25-PE/Cy7 (Ebioscience, San Diego, CA). Following staining, cells were sorted into CD4+CD45RB+CD25−(Tresp) or FOXP3/GFP+(Treg) populations using a FacsAria instrument (BD, San Diego, CA). 1E6 Treg and 4E6 Tresp Cells were transferred into lymphopenic (RAG1 KO) recipients at 1∶4 ratio of Treg:Tresp. On day 7–8 post-transfer, recipient animals were harvested, and single-cell suspensions generated from spleens and lymph nodes as above. For analysis, cells were counted by trypan blue exclusion, and stained for CD3-APC (Ebioscience, San Diego, CA), CD4-PacOrange (Life Technologies Carlsbad, CA) or CD4-PE (Ebioscience), CD25-FITC (Ebioscience, San Diego, CA), followed by analysis using an LSR2 instrument (BD Biosciences, San Jose, CA).
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9

Multiparametric Flow Cytometry for Cell Phenotyping

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Expression of cell surface molecules was detected using a FACScan (BD Biosciences, San Jose, CA, USA), and analyzed using CellQuest software (BD Biosciences). Cells were stained with the following monoclonal antibodies: FITC-CD25 (eBioscience), PE-Cy5-CD4, and FITC-CD3 (BD Biosciences). Isotype-matched irrelevant mAbs were used as negative controls. Apoptosis was assessed using PE-Annexin V staining (BD Biosciences). Foxp3 staining was performed using fixation and permeabilization buffers contained in the Foxp3 kit according to manufacturer’s instructions (eBioscience).
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10

Multiparameter Flow Cytometry Profiling

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Flow cytometry was performed on single cell suspensions using these mouse antibodies; PerCp-CD4, Alexa-488-CD4, Alexa-647-FoxP3, PE-IL17A, FITC-CD25, PE-PD1 (Biolegend), PE-FoxP3, PC-IL17, FITC-CD25, APC-CD11b, FITC-PDL2, PE-PDL1 (eBiosciences). Flow cytometry was run on an Accuri benchtop C6 cytometer and analysed using FlowJo™ software. For all analyses unless otherwise stated, samples were gated on lymphocyte populations based on size, as assessed by SSC and FSC, followed by gating for CD4 positivity. Intracellular staining was performed by fixation and permeabilization using eBioscience Fix-Perm Intracellular staining buffers (Cat. Num 8222-49 and 8333-56). Staining was performed for 1 hour at room temperature followed by washing in FACS buffer (2% FCS (Hyclone), in PBS (Gibco)) Analyses were performed using FlowJo™ and data statistically tested using GraphPad Prism™ software, with tests described in respective figure legends.
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