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Histone acetyltransferase activity assay kit

Manufactured by Abcam
Sourced in United Kingdom, United States

The Histone Acetyltransferase Activity Assay Kit is a tool designed to quantify the activity of histone acetyltransferase enzymes. It provides a colorimetric readout that can be used to measure the acetylation of histone substrates.

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7 protocols using histone acetyltransferase activity assay kit

1

Histone Acetyltransferase Activity Assay in Oocytes

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HAT activity was measured using a Histone Acetyltransferase Activity Assay Kit (Colorimetric) (ab65352, Abcam, Cambridge, UK) according to the manufacturer’s instructions. Briefly, approximately 50 mg of the oocyte samples at 0, 8, and 28 HPO and HPS were homogenised in 0.1% Triton X-100 on ice and then centrifuged at 10,000× g for 5 min at 4 °C. The supernatant was used for histone acetyltransferase activity assays. The total protein concentration was estimated using the Bio-Rad protein assay kit (500-0001, Bio-Rad Laboratories, Hercules, CA, USA). Fifty micrograms of protein extract were incubated with HAT substrate I, HAT substrate II, and NADH-generating enzyme in HAT assay buffer for up to 4 h at 37 °C. An ELISA plate reader (Synergy 2, BioTek Instruments, Winooski, VT, USA) was used to measure the absorbance at 440 nm. The active nuclear extract was used as a positive control and a standard. All measurements were performed in duplicate.
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2

Histone Extraction and Acetylation Analysis

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Total Histone protein extraction was performed according to Abcam protocol online. Western blotting was performed using antibodies specific for histone H3 (cat. 9715), histone H4 (cat. 2592), acetyl-histone H3 (Lys9/Lys14) (cat. 9677), acetyl-histone H4 (Lys5) (cat. 9672) (Cell Signaling). The effect of TRIM-exposure on HAT activity was detected in vitro using the Histone Acetyltransferase Activity Assay Kit (Abcam, ab65352).
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3

Quantifying Histone Acetyltransferase Activity

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Relative HAT activity was quantified in PN1 DG with the Histone Acetyltransferase Activity Assay Kit (Abcam) according to the manufacturer’s instructions. This kit measures total HAT activity using strip wells coated with peptide substrate and a solution with the cofactor acetyl-CoA. Acetylation of the peptide substrate by functional HATs initiates release of the free form of CoA that acts as an essential coenzyme for production of NADH. NADH is then detected spectrophotometrically following reaction with a soluble tetrazolium dye. Samples of whole-cell tissue extracts (40 μl of 1 μg/μl) were incubated with assay mix at 37 °C for 1 h. The plate was assessed in a microplate reader at 440 nm. Data was analyzed as the relative O.D. value per μg.
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4

HAT Assay for Hyperacetylation

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HAT assay was performed to quantify hyperacetylation by HAT2 over-expressing L. donovani promastigote cells. Total cell lysate for the assay was prepared by five freeze-thaw cycles in liquid nitrogen vapour phase and then 3 pulses of sonication at 20% efficiency for 20 seconds at an interval of 20 seconds. Total protein in each lysate was quantified using BCA protein assay kit (Pierce). HAT assay was performed using Histone acetyltransferase activity assay kit (Abcam) as per manufacturer’s protocol. OD was measured at 440 nm at an interval of 30 minutes and HAT activity was expressed as relative OD440nm/μg/minutes of total protein.
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5

Nuclear Extraction and HAT Assay

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Nuclear extracts were prepared by lysing cells in phosphate buffered saline (PBS) containing 1% NP-40 and after a short centrifugation the supernatant (cytoplasmic fraction) was removed. The nuclear extracts were washed twice with 1% NP-40 in PBS and lysed using RIPA lysis buffer. HAT assay was performed using a Histone acetyltransferase activity assay kit (ab65352, Abcam) according to the manufacturer's protocol. For each assay 30 μg nuclear extract was used and the OD was measured at 450 nm at 1-h intervals.
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6

Quantifying Nuclear HAT Activity

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Nuclear HAT activity was quantified using Histone Acetyltransferase Activity Assay Kit (ab65352, Abcam, Boston, MA, USA) according to the manufacturer’s instructions. Briefly, 50 μg of nuclear extract was incubated with HAT I/II and NADH-generating enzyme in HAT assay buffer for 4 h at 37 °C. The optical density was measured at 450 nm in a Multiskan Sky microplate spectrophotometer (Thermo Fisher Scientific Inc., Waltham, MA, USA). Active nuclear extract was used as a positive control. HAT activity was expressed as the relative O.D. value per μg, after which the activity was calculated in % relative to the vehicle control. All experiments were performed in technical triplicate at least three times.
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7

EP300 HAT Domain Acetylation Assay

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The crystal structure of the EP300 HAT domain was previously deposited at RCSB PDB (www.pdb.org) under accession code 3BIY. Acetyltransferase (HAT) activity was assessed using the Histone Acetyltransferase Activity Assay Kit (Abcam) according to manufacturer's instructions. Briefly, 200 ng of purified human CREBBP protein (wild-type or selected mutants) were subjected to the in vitro acetylation assay in a 96 well plate. The plate was incubated at 37 C in an absorbance reader (Optima) and absorbance at 450 nm was measured every hour for a period of 5 hours. For data analysis, background absorbance of a negative control was subtracted from each sample at the respective time point. HAT activity is expressed as relative absorbance value per mg protein.
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