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Ni2 affinity chromatography

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Ni2+ affinity chromatography is a technique used for the purification and isolation of proteins. It utilizes the interaction between nickel ions (Ni2+) and the histidine tags commonly present in recombinant proteins to selectively bind and capture the target proteins from a complex mixture. This method allows for the efficient separation and concentration of the desired proteins.

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3 protocols using ni2 affinity chromatography

1

Cloning and Purification of EgHCDH Protein

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Total RNA was extracted using an RNA prep Pure Tissue Kit (Nanjing Vazyme Biotech, Nanjing, China). First-strand cDNA was synthesized using a reverse transcription system kit (Nanjing Vazyme Biotech). The full coding sequence of the non-membrane region of EgHCDH was amplified using the primers 5′- CGG GAT CCA TGT CAG CCG GTG CTG G-3′ (BamHI) and 5′-GAC GTC GAC TCA CTG TTT TTC CTT GAC AAT GCG C-3′ (SalI). Amplification reactions were performed using the following cycling conditions: pre-denaturation at 95 °C, 5 min; then denaturation at 95 °C/30 s, 62 °C/30 s, 72 °C/1 min; with a final extension at 72 °C, 5 min. Through sequencing, digestion and ligation, EgHCDH was ligated into the pET32a (+) plasmid (Novagen, Darmstadt, Germany) and transformed into Escherichia coli BL21 (DE3) cells (Tiangen, Beijing, China). Protein expression was induced with 1 mM isopropyl-1-thio-β-d-galactopyranoside at 37 °C for 6 h. The rEgHCDH protein was purified using Ni2+ affinity chromatography (Bio-Rad, Hercules, CA, USA), with the the purity of the final product determined by 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). The concentrations of the purified protein were determined using a NanoDrop 2000c spectrophotometer (Bio-Rad).
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2

Recombinant Eg-DHFR Protein Expression

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The region encoding mature Eg-DHFR was amplified from E. granulosus cDNA using the primers 5′-CGCGGATCCATGGGGCTGAAGCGTCT-3′ and 5′-CCGCTCGAGATGATCATTAAGGGGATGCG-3′, and then ligated into the BamHI/XhoI restriction sites of vector pET-28a(+) (Novagen, Madison, WI, USA). Recombinant protein was expressed and purified as previously described33 (link). Briefly, the recombinant plasmid was transformed into E. coli BL21 (DE3) cells (Invitrogen, Carlsbad, CA, USA) and expression was induced with 1 mM isopropyl- thio-β-D-1-thiogalactopyranoside at 37 °C for 5 h. The bacterial cells were harvested and suspended in lysis buffer, followed by ultrasonic lysis. The recombinant protein was purified by Ni2+ affinity chromatography (Bio-Rad, Hercules, CA, USA) following the manufacturer’s instructions. Recombinant protein was detected by 12% SDS-PAGE and the concentration of protein was estimated using a bicinchoninic acid protein assay kit (Pierce, Rockford, IL, USA).
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3

Recombinant Protein Expression and Purification

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TRIzol reagent (Tiangen, Beijing, China) was used to extract total RNA from adult worms, protoscolices and oncospheres. cDNA was reverse-transcribed using a RevertAid First Strand cDNA Synthesis Kit following the manufacturer’s instructions (Thermo Fisher Scientific, Vilnius, Lithuania). Target fragments were amplified, ligated into the pET32a(+) vector (TaKaRa, Dalian, China) and transformed into BL21 (DE3) competent cells. Expression of the recombinant proteins was induced by 1 mM isopropyl β-d-1-thiogalactopyranoside (IPTG) and purification was achieved using Ni2+ affinity chromatography (Bio-Rad, Hercules, CA, USA).
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