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Quant ittm picogreen dsdna reagent and kits

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Quant-iTTM PicoGreen ® dsDNA Reagent and Kits are a highly sensitive fluorescent nucleic acid stain designed for quantitation of double-stranded DNA (dsDNA) in solution. The reagent binds to dsDNA and emits fluorescence that can be measured using a fluorometer or plate reader.

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5 protocols using quant ittm picogreen dsdna reagent and kits

1

Quantifying Plasma DNA Levels

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DNA in the plasma of human and mice was quantified according to the manufacturer’s instructions using Quant-iTTM PicoGreen ® dsDNA Reagent and Kits (Invitrogen, MA, USA). The fluorescence intensity reflects the amount of DNA, which was measured at excitation and emission wavelengths of 480 nm and 520 nm, respectively, in a microplate reader (Thermo Fisher Scientific, MA, USA).
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2

Quantifying Decellularized Matrix DNA

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Measuring the amount of double-stranded DNA (dsDNA) in the decellularized-extracellular matrix (dECM) is the current gold standard for evaluating the degree of successful decellularization. Samples were divided into five groups: DBMs, 14d MSC-based TEBs, 14d MSC ECM-based TEBs, 14d MSC/POC-based TEBs, 14d MSC/POC ECM-based TEBs. Samples (~10 mg) were transferred to 1.5 mL Eppendorf tube and digested in 250 mg/mL papain (Sigma-Aldrich) overnight at 60°C. Quant-iTTM PicoGreen® dsDNA Reagent and Kits (Invitrogen, Carlsbad, California, USA) was employed according to the manufacturer’s protocol, and the fluorescence was quantified at 520 nm with excitation at 480 nm.
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3

Quantification of Cell-Free DNA and MPO-DNA Complexes

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Ds DNA in the plasma of mice was detected using Quant-iTTM PicoGreen ® dsDNA Reagent and Kits (Invitrogen, Carlsbad, CA, USA). As described, the obtained plasma and diluted standard DNA were added to a Picogreen working solution and incubated for 2 to 5 min at room temperature, protected from light. Fluorescence intensity was measured by a fluorescence microplate reader at a 480 nm excitation wavelength and 530 nm emission wavelength. The amount of DNA was determined from the standard curve.
The concentration of MPO-DNA complexes in the plasma of mice was determined using a capture ELISA kit, as previously reported. An anti-MPO antibody (22225-1-AP, Proteintech, Wuhan, China) was coated overnight at 4 °C for the antibody capture. After blocking with 1% BSA, the plasma was added to the wells with peroxidase-labelled anti-DNA antibody and incubated for 2 h at room temperature. Next, the plate was washed, and peroxidase substrate was added for 40 min of incubation at 37 °C, protected from light. Optical density was determined at 405 nm.
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4

Osteogenic Differentiation of TSPCs

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Osteoblastic differentiation of TSPCs was estimated by measuring ALP activity per living cell to standardize the effect of OCP and CDHA on osteogenic differentiation from TSPCs. The incubated TSPCs were lysed in 250 μL of 0.2% Triton X-100 solution (Sigma-Aldrich, St. Louis, MO, USA) and sonicated. The proliferation of TSPCs was tested by quantifying the DNA concentration using Quant-iTTM PicoGreen® dsDNA Reagent and Kits (Invitrogen, Waltham, MA, USA) according to the manufacturer’s instructions. The ALP activity in the incubated cells was determined using LabAssay ALP® (FUJIFILM Wako Pure Chemical Co., Osaka, Japan) and calculated according to the manufacturer’s instructions.
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5

Fluorescent Nucleic Acid Quantification

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Pepsin (Sigma-Aldrich, St. Louis, MO, USA), Hoechse33258 (Sigma-Aldrich, MA, USA), Papain (Sigma-Aldrich, MO, USA), HCl (SHOWA, Gyoda, Japan), NaOH (SHOWA, Japan), Triton X-100 (Sigma-Aldrich, MO, USA), Aprotinin (Sigma-Aldrich, MO, USA), RNase A (Sigma-Aldrich, MO, USA), Chloramine T trihydrate (Sigma-Aldrich, MO, USA), DNase I (Merck, Darmstadt, Germany), Citric acid (JTbaker, Radnor, PA, USA), Sodium acetate trihydrate (JTbaker, PA, USA), and Quant-iTTM PicoGreen dsDNA Reagent and Kits (Invitrogen, Waltham, MA, USA) were used.
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