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2 protocols using anti ash2l

1

Histone Modification and Signaling Pathway Analysis

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Cells were harvested and lysed in RIPA buffer with protease inhibitors and 2 μM PMSF. Protein extracts were boiled in SDS sample buffer for 5 min, loaded directly onto a 4–12% SDS gel, transferred onto nitrocellulose membranes (Bio-Rad), blocked with 5% milk, and incubated with corresponding primary and secondary antibodies using standard protocols. The following antibodies were used: anti-H3K4me1 (Cat # 07-436, 1:2000 dilution), anti-H3K4me2 (Cat # 07-030, 1:4000 dilution), anti-H3K4me3 (Cat # 07-473, 1:4000 dilution), anti-H3K9me1 (Cat # 07-450, 1:2000 dilution), anti-H3K9me2 (Cat # 07-441, 1:3000 dilution), anti-H3K9me3 (Cat # 07-442, 1:3000 dilution), anti-H3K27me1 (Cat # 07-448, 1:2000 dilution), anti-H3K27me2 (Cat # 07-452, 1:4000 dilution), and anti-H3K27me3 (Cat # 07-449, 1:4000 dilution) from Millipore; rabbit anti-Jmjd3 (Cat # ab1022a, 1:500 dilution) from Abgent; and mouse anti-FLAG (1:5000 dilution), anti-HRP-FLAG (1:5000 dilution), and anti-β-actin (1:5000 dilution) from Sigma; anti-Smad1 (Cat # 6944, 1:500 dilution), anti-Smad2 (Cat # 5339, 1:500 dilution) and anti-Smad3 (Cat # 9523, 1:500 dilution) from Cell Signaling; and anti-Ash2L (Cat # ab50699, 1:500 dilution) from Abcam.
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2

ChIP Assay for AR and Chromatin Modifications

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ChIP assays were performed according to previously described protocols (25 (link)). 22Rv1 cells were transfected with FLAG-BAP18 using jetPRIME transfection reagent (Polyplus) or infected with shBAP18, and then cultured for 2 days in phenol red-free RPMI 1640 supplemented with 10% charcoal-dextran-stripped FBS. At ∼90% confluency, cells were treated with 10−8M DHT or EtOH for 12 h and harvested for ChIP. Immunoprecipitation of sonicated chromatin solutions was conducted by overnight incubation at 4°C with anti-AR (Thermo), anti-BAP18, anti-MLL1, anti-hMOF, anti-Ash2L, anti-H3K27me3 (Abcam), anti-H3K4me3 (Abcam) or anti-H4K16ac (Millipore) antibody. Cross-linking was reversed at 65°C, and DNA fragments were extracted with phenol-chloroform and precipitated with ethanol. The purified DNA was dissolved in TE buffer and analyzed by regular PCR. Primer sequences of PSA-ARE I/II were as follows: forward 5′-GCCAAGACATCTATTTCAGGAGC-3′, and reverse 5′-CCCACACCCAGAGCTGTGGAAGG-3′. DNA fragments was analyzed by real-time PCR (RT-PCR) with SYBR Green dye. Results were expressed as percentage of input chromatin and were derived from a single experiment that is representative of at least two independent experiments.
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