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9 protocols using anti cd127 pe cy7

1

Flow Cytometric Analysis of Lung Immune Cells

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For flow cytometric analysis of surface markers, single-cell suspensions of lungs were incubated with a mixture containing anti-FcγRIII/II antibody (Biolegend) as well as mouse, rat, and hamster serum to block nonspecific binding. Cells were then incubated with optimal concentrations of the following specific antibodies against surface molecules: anti-CD90.2-APC-eFluor780, anti-CD127-PE-Cy7 (all from eBioscience), anti-CD44-FITC (Biolegend), anti-CD4-V500, anti-CD62L-APC, and anti-KLRG1-BV711 (all from BD Biosciences). For intracellular cytokine staining, 0.8 × 106 cells were stimulated with plate-bound anti-CD3/anti-CD28 (each 5 µg/ml, BD Bioscience) or H1 (5 μg/ml) for 4.5 h in the presence of GolgiPlug™ (BD Biosciences). Cell were stained with optimal concentrations of anti-CD4-V500 (BD Biosciences), anti-CD44-FITC (Biolegend), and anti-CD90.2-APC-eFluor780 (eBioscience). Afterward cells were fixed and permeabilized with Cytofix/Cytoperm™ (BD Biosciences). Intracellularly accumulated cytokines were stained with anti-IFN-γ-PE (Biolegend) or anti-IFN-γ-V450 (BD Bioscience), respectively, anti-TNF-PE-Cy7 (Biolegend), anti-IL-17A-PerCP-Cy5.5 (eBioscience), and anti-IL-2-APC (BD Biosciences). Data were acquired on a FACSCanto™II (BD Bioscience) or on a LSRII (BD Bioscience) and analyzed with the FCS Express 5 Flow Cytometry software (DeNovo™ Software).
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2

Phenotyping of Activated PBMC

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Freshly isolated PBMC at 5 × 105 cells/well were stimulated with anti-CD28 (0·5 ug/ml), peptide pools (ESAT-6, CFP-10, ESAT-6/CFP-10 (E6C10) or AIM alone for 6 hours at 37°C in 5% CO2 incubator. Cells were harvested after 14–18 h rest at 4°C, erythrocyte lysed, and then surface-stained in the dark. The following directly conjugated monoclonal antibodies were used: anti-CD3-Pacific Blue, anti-CD4-AmCyan, anti-CD25-Per-CP-Cy5·5, anti-CD161-PE, anti-CD39-APC, anti-CD147-FITC (BD Bioscience) and anti-CD127 PE-Cy7 (eBioscience).
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3

Characterization of Yellow Fever-Specific CD8+ T Cells

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For HLA-0A2, HLA-B35, HLA-B27 and HLA-B07 positive participants identified using polymerase chain reaction, yellow fever specific CD8+ cells were identified using the tetramers described above. Twenty μL tetramer mix were added to 1–2 million cells per well in a 96-wells plate. After incubation for 30 minutes at 4°C, 30 μL of antibody mix including anti-CD3 V500 (BD Biosciences, (San Jose, CA, USA)), anti-CD8 BV785, anti-CD45RA BV650 from Biolegend (San Jose, CA, USA) anti-CD27 APC-eFluor 780 and anti-CD127 PE-Cy7 from eBioscience (San Diego, CA, USA) and Live/Dead fixable red cell stain kit (Invitrogen, Carlsbad, CA, USA) were added for 30 minutes. For intracellular staining, cells were fixated with the Fixation solution (eBioscience) for 20 minutes at room temperature and permeabilized with permeabilization solution (eBioscience). Cells were washed twice and a mix of intracellular antibodies comprising anti-Eomes PerCP-eFluor710 from BD Biosciences, anti-Ki67 BV711, anti-T-bet AF647 from Biolegend, anti-granzyme B AF700 from eBioscience, and anti-granzyme K PE from Immunotools (Friesoythe, Germany) was added for 30 minutes. Cells were then washed and re-suspended in 100 μl PBEA to be measured.
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4

Intracellular Cytokine Staining for Th17 Cells

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Cells were stimulated with phorbol 12-myristate 13-acetate (50 ng/ml) and ionomycin (1 μg/ml) in the presence of monensin (10 μg/ml) for 6 h. Cells were transferred to FACS tubes, and anti-CD3-PerCP Cy5.5 (eBioscience), anti-CD4-FITC (eBioscience), anti-CD25-APC (eBioscience), and anti-CD127-PE Cy7 (eBioscience) were added for a 20-min incubation in darkness at 4°C. Cells were fixed by 100 μl of Fixation & Permealization Medium A (Invitrogen, Grand Island, NY, U.S.A.) for a 15-min incubation, and then were resuspended in 100 μl of Fixation & Permealization Medium B (Invitrogen) containing anti-IL-17A-PE (eBioscience) for a 20-min incubation in darkness at room temperature. Cells were analyzed with FACS Calibur analyzer (BD Biosciences Immunocytometry Systems, San Jose, CA, U.S.A.). Acquisitions were performed using Cell Quest Pro Software (BD Biosciences), and data were analyzed using FlowJo Version 7.6.2 (Tree Star Inc., Ashland, OR, U.S.A.).
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5

Multiparameter Flow Cytometry Analysis

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The following antibodies were used for cell surface marker evaluation: anti-CD4-PE-Cy5, anti-CD69-PE, anti-CD127-PE-Cy7, anti-CD20-PE-Cy7, anti-CD86-PE, anti-CD80-FITC (eBioscience, San Diego, CA), anti-CD25-ECD, anti-HLA-DR-ECD, and anti-CD11c-PC5 (Beckman Coulter, Brea, CA). Primary human cells or Ramos cells were suspended in FACS buffer (1× PBS, 1% BSA, 0.1% NaN3) and incubated for 20 minutes with panels of the indicated antibodies at 4°C. After washing, cells were analyzed in a Navios flow cytometer (Beckman Coulter, Brea, CA) and data was analyzed using FlowJo 7.6 software (Tree Star, Inc., Ashland, OR). Gates used for analysis were set using appropriate isotype controls.
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6

Phenotypic Characterization of Dendritic Cells and ILC2s

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DCs were assessed using the antibodies of anti-CD11c-PC5.5; anti-CD80-FITC; anti-HLA-DR-APC-Cy7 and anti-CD86-PE-Cy7. PBMCs or ILC2s were stained with Fixable Viability Dye-eF506 and the following specific mAbs: Lineage cocktail (CD2, CD3, CD14, CD16, CD19, CD56, CD235a, FceR1)-FITC (all from eBioscience, San Diego, Calif, USA); anti-CRTH2-PE (BD Pharmingen, USA) and anti-CD127-PE-Cy7 (eBioscience, San Diego, Calif, USA). For intracellular cytokine assay, PBMCs or ILC2s were stimulated with phorbol myristate acetate (PMA), ionomycin, and brefeldin A (BFA) for 5 h, and then, the cells were fixed, permeabilized, and stained with anti-IL-13-BV421 (BioLegend, San Diego, CA, USA). For GATA3 levels detection, the cells were processed with the FoxP3/Transcription Factor Staining Buffer Set before staining with anti-GATA3-BV421(BioLegend, San Diego, CA, USA). After staining, samples were analyzed on a CytoFLEX Flow Cytometer (Beckman Coulter, Hercules, CA, USA).
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7

Comprehensive Immune Cell Profiling

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Fluorochrome-coupled antibodies specific for human antigens: anti-CD4-FITC, anti-CD127-PE-Cy7, anti-CD62L-PE, anti-CCR4-PE, anti-CCR7-PE, anti-CCR6-PE, anti-CCR10-PE, anti-CXCR3-PE-Cy5, anti-HLA-DR-FITC, anti-CD25-PE-Cy7, anti-CD39-PE, anti-CD44-PE-Cy7, anti-CD45RA-PE-Cy5, anti-GITR-PE, anti-CD45RO-PE, and anti-CD278-PE (all from eBioscience, USA) were used for cell surface staining. Monoclonal antibodies (mAbs)anti-Foxp3-PE, anti-CTLA-4-PE-Cy7, anti-Helios-FITC, and anti-IDO (indolamine-2,3-dioxygenase)-PE-Cy7 (all from BD Pharmingen, USA) were used for intracellular staining. Quantitative analysis was performed using FlowJo software.
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8

Human FACS Staining Protocol

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The following monoclonal antibodies were used for human FACS stainings: from BD Biosciences (San Jose, CA): anti-CD25 APC (2A3, 1:20), anti-CD45RO APC-H7 (UCHL1, 1:20), anti-CD4 V500 (RPA-T4, 1:20); from Biolegend (San Diego, CA): anti-CD45RA FITC (HI100, 1:20), anti-CD3 PerCP-Cy5.5 (HIT3a, 1:20), anti-CD127 PE-Cy7 (A019D5, 1:20), anti-CD8a Pacific Blue (RPA-T8, 1:50), anti-CD11b Pacific Blue (ICRF44, 1:50), anti-CD14 Pacific Blue (HCD14, 1:50), anti-CD19 Pacific Blue, anti-CD3 Alexa Fluor 700 (HIT3a, 1:20), anti-CD45 Alexa Fluor 700 (HI30, 1:20), anti-Ki67 APC (16A8, 1:200) or anti-Ki67 Brilliant Violet 605 (16A8, 1:400); from eBioscience (San Diego, CA): anti-Foxp3 Alexa Fluor 700 (PCH101, 1:100), anti-Foxp3 PE (236A/E7, 1:100); Unspecific binding of antibodies was prevented by incubation of cell suspensions with Fc-Block (Human TruStain FcX, BioLegend, 1:20) for 5 min at RT, followed by FACS staining for 20 min at RT in the dark. Cells were passed through a 40 μm cell strainer (NeoLab) to remove large debris.
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9

Multiparameter Immune Cell Phenotyping

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Anti-CD8a-eFluoro® 450, anti-CD127-PE-Cy7, anti-IFNγ-eFluoro® 450, anti-TNFα-FITC were obtained from eBioscience (San Diego, USA), anti-CD44-FITC, anti-CD62L-alexa700 were obtained from BD Biosciences (Oxford, UK), and anti-CD27-PerCP-Cy5.5 was obtained from Biolegend (San Diego, USA). Cells were incubated with the indicated antibodies at 4°C for 20 minutes.
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