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11 protocols using anti cd29 pe

1

Immunophenotypic Analysis of AT-MSCs

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Passage 2 AT-MSCs were analyzed by flow cytometry [15 (link), 16 (link)]. Cells (2 × 105 cells) were placed in fluorescence-activated cell sorting (FACS) tubes (BD Biosciences), washed with FACS buffer (PBS containing 2% FBS), and then incubated with the following fluorescein- (FITC-) or phycoerythrin- (PE-) conjugated antibodies: anti-CD14-FITC (BD Pharmingen), anti-CD29-PE (BioLegend), anti-CD34-PE (R&D Systems), anti-CD44-PE (BioLegend), anti-CD45-FITC (eBioscience), and anti-CD90-PE (eBioscience) or their respective isotype controls. The cells were washed twice with FACS buffer and resuspended in 500 μl of FACS buffer. Fluorescence was evaluated by flow cytometry in a FACSCalibur instrument (BD Biosciences). Data were analyzed using WinMDI 2.9 analysis software.
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Mesenchymal Stromal Cell Phenotyping

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Mesenchymal stromal cells were analyzed by flow cytometry with a FACSCalibur equipped with CellQuest software (BD Biosciences, Milano, Italy) using the following antibodies: anti CD44-PE and anti CD29-PE and the corresponding isotype control antibodies (all purchased from Biolegend).
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3

Multilineage Cell Characterization

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Cells were incubated with the following phycoerythrin (PE)-conjugated or fluorescein isothiocyanate (FITC)-conjugated antibodies: anti-CD29-PE (cat.no.303,004; BioLegend), anti-CD34-PE (cat.no.ab23830; Abcam), anti-CD44- FITC (cat.no.MA1-10229; Invitrogen), anti-CD45-FITC (cat.no.ab27287; Abcam), and anti-CD90-PE (cat.no.11-0900-81; Invitrogen) or their respective isotype controls. Cells were analyzed using a FACSCanto flow cytometry system (Beckman, USA). Data acquisition and analysis was performed with CytExpert.
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4

ADSC Phenotypic Characterization Protocol

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After pretreatment with TNF-α and IL-1β or the absence thereof, the hADSCs were harvested by digestion with 0.05% trypsin/1 mM ethylenediaminetetraacetic acid (EDTA) (Specialty Media, Millipore, Billerica, MA, USA) and washed with PBS twice. The cell pellets were resuspended in PBS and incubated with anti-CD29-PE, anti-CD44-FITC, anti-CD34-FITC, anti-CD45-FITC, anti-CD80-PE, anti-CD86-PE, anti-HLA-ABC-FITC, and anti-HLA-DR-PE (all from BioLegend, San Diego, CA, USA) for about 30 min in the dark. The cytometry data were processed and analyzed using FlowJo software.
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5

Multiparametric Flow Cytometry of Infiltrating Immune Cells

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In in vivo experiments, mice were sacrificed after tMCAO. The BALF was centrifuged at 500 g to collect cells. After being washed with PBS, cells were fixed and permeabilized (Invitrogen, Intracellular Fixation & Permeabilization Buffer Set), then stained with intracellular antibodies. The following antibodies were used: anti‐CD45‐BV421 (Biolegend, 103 134, clone: 30‐F11, 1:400), anti‐ F4/80‐AF488 (Biolegend, 123 120, clone: BM8, 1:400), anti‐LY6G‐APCCy7 (Biolegend, 108 424, clone: RB6‐8C5, 1:400), anti‐CD11c‐APC (Biolegend, 117 310, clone: N418, 1:400), anti‐CD3‐PECy7 (Biolegend, 100 220, clone: 17A2, 1:400), anti‐CD19‐PE (Biolegend, 152 408, clone: 1D3/CD19, 1:400), anti‐CD45‐PerCPCy5.5 (Biolegend, 368 504, clone: 2D1, 1:400), anti‐CD90‐FITC (Biolegend, 328 108, clone: 5E10, 1:400), anti‐CD34‐APC (Biolegend, 343 509, clone: 581, 1:400), and anti‐CD29‐PE (Biolegend, 303 004, clone: TS2/16, 1:400). Cell viability of BMDM was assessed using the Annexin V‐APC/PI apoptosis Detection Kit (KeyGEN, KGA1030‐100) according to manufacturer' s instructions.
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6

Canine Adipose-Derived Stem Cell Phenotype

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Phenotype analysis was performed as described previously [77 (link)]. Passage 2 cADSC were placed in fluorescence-activated cell sorting (FACS) tubes (BD Biosciences, Franklin Lake, NJ, USA; 2 × 105 cells/tube), washed with FACS buffer (PBS containing 2% FBS), followed by blocking Fc receptors with canine Fc receptor binding inhibitor (Thermo Fisher Scientific), and then incubated on ice for 20 min with the following fluorescein (FITC)- or phycoerythrin (PE)-conjugated antibodies: anti-CD14-FITC (BD Pharmingen, San Diego, CA, USA), anti-CD29-PE (BioLegend, San Diego, CA, USA), anti-CD34-PE (R&D Systems, Minneapolis, MN, USA), anti-CD44-PE (BioLegend), anti-CD45-FITC (eBioscience, San Diego, CA, USA), and anti-CD90-PE (eBioscience) or their respective isotype controls. The cells were washed twice with FACS buffer and resuspended in 500 μL FACS buffer. Fluorescence was evaluated by flow cytometry in a CytoFLEX instrument (Beckman Coulter, Brea, CA, USA). The data were analyzed using CytExpert ver2.0 analysis software.
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7

Immunophenotypic Characterization of AT-MSCs

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Passage 2 AT-MSCs were analyzed by flow cytometry. The cells were placed in fluorescence-activated cell sorting (FACS) tubes (BD Biosciences; 2 × 105 cells/tube), washed with FACS buffer (PBS containing 2% FBS), blocking Fc receptors with canine Fc receptor binding inhibitor (Thermo Fisher Scientific), and then incubated with the following fluorescein- (FITC-) or phycoerythrin- (PE-) conjugated antibodies: anti-CD14-FITC (BD PharMingen), anti-CD29-PE (BioLegend), anti-CD34-PE (R&D Systems), anti-CD44-PE (BioLegend), anti-CD45-FITC (eBioscience), and anti-CD90-PE (eBioscience) or their respective isotype controls listed in Table 1. The cells were washed twice with FACS buffer and resuspended in 500 μl FACS buffer. Fluorescence was evaluated by flow cytometry in a FACSCalibur instrument (BD Biosciences). Data were analyzed using WinMDI 2.9 analysis software.
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8

Characterization of ADSC Phenotype

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The cell surface markers were analyzed with flow cytometry. The primary ADSCs at passage 3 (n = 3), and the ADSC-K4DT (n = 3) and ADSC-K4D (n = 3) cells were analyzed at low (approximately PDL 20), intermediate (approximately PDL 50), and high (approximately PDL 100) PDs. The cells were washed with FACS buffer (PBS containing 2% FBS), and the Fc receptors were blocked with canine Fc receptor binding inhibitor (Thermo Fisher Scientific). Then, the cells were incubated with the following phycoerythrin (PE)-conjugated antibodies: anti-CD29-PE (clone: TS2/16; BioLegend, San Diego, CA, USA), anti-CD34-PE (clone: 1H6; R&D Systems, Minneapolis, MN, USA), anti-CD44-PE (clone: IM7; BioLegend), anti-CD45-PE (clone: YKIX716.13; eBioscience, San Diego, CA, USA), anti-CD90-PE (clone: YKIX337.217: eBioscience), and anti-HLA-DR-PE (clone: G46-6: BD Biosciences, Franklin Lake, NJ, USA). All the cells at each passage were examined in triplicate.
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9

Immunophenotyping of Muse-AT Cells

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Muse‐AT cells were incubated at 4°C for 30 minutes in the presence of the following fluorochrome‐conjugated antibodies: anti‐SSEA3‐Alexa Fluor 647 (BD Biosciences), anti‐CD105‐APC, anti‐CD90‐FITC, anti‐CD73‐PE, anti‐CD29‐PE, anti‐CD34‐PE, anti‐CD73‐PE, anti‐CD45‐FITC, anti‐HLA‐ABC‐PE, anti‐HLA‐DR‐PE, and anti‐CD44‐PE (all from BioLegend). As a negative control, isotype‐matched irrelevant monoclonal antibodies were used. Analysis (104 events per run) was performed using the FACSCantoII flow cytometer and DIVA6 software (BD Biosciences).
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10

Characterizing Mesenchymal Stem Cell Markers

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To examine the expression of ASC markers, cells (1 × 105 cells) were incubated with anti-CD29-PE, anti-CD44-PE, anti-CD105-PE, anti-CD34-FITC, anti-CD45-PE, and anti-HLA-DR antibodies for 2 h at 4 °C (BioLegend, San Diego, CA, USA). Antibody-positive populations were quantitated using FACS-Calibur (BD Biosciences, San Jose, CA, USA) and analyzed using FlowJo (Tree Star, Ashland, OR, USA). Stain Index (SI) values for each (+) and (−) MSC biomarker were calculated using the following formula: SI=MFI1MFI22×SD ; MFI1, geometric mean fluorescence of control stain; MFI2, geometric mean fluorescence of test stain; SD, standard deviation of geometric mean fluorescence.
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