The largest database of trusted experimental protocols

29 protocols using smz800 microscope

1

GUS Staining of BKN1 and BKN2 Promoter Plants

Check if the same lab product or an alternative is used in the 5 most similar protocols
Inflorescences or stage 12 flowers from the BKN1 and BKN2 promoter-GUS transgenic plants were incubated in GUS solution overnight at 37 °C according to the protocol used in Wang et al. [15 (link)]. Tissues were then fixed in ethanol:glacial acetic acid and cleared with chloral hydrate solution as described by [105 ]. Tissues were mounted in 30% glycerol and images were taken on a Nikon sMz800 microscope.
+ Open protocol
+ Expand
2

Characterization of Pickering Emulsions

Check if the same lab product or an alternative is used in the 5 most similar protocols
SEM-EDX was performed using a Quanta FEG 250 at an acceleration voltage of 30 kV under high vacuum (8 × 10−5 mbar). The SEM samples were prepared by adding 100–200 µL of ethanol into the Pickering emulsion samples to destabilize the emulsions and form interfacial arrays which were dried onto aluminum foil in a vacuum oven. Optical microscopy of the Pickering emulsions was performed using a Nikon SMZ800 microscope. TEM images were recorded using a Joel JEM-1400 Plus Transmission Electron Microscope at an acceleration voltage 80 kV. The TEM samples were fabricated by extracting a Pickering emulsion droplet with a carbon film covered TEM grid (S160,200 mesh Cu (25)), then drying at room temperature.
+ Open protocol
+ Expand
3

Quantifying MSC Attachment on PES/PVP Membranes

Check if the same lab product or an alternative is used in the 5 most similar protocols
MSC attachment on flat porous PES/PVP membranes uncoated or coated with fibronectin (200 µg/mL) was assessed, as described in Skrzypek et al. [48 ]. In short: MSCs were seeded with a density of 10.000 cells/cm2 and kept in culture for 1 day. Subsequently, samples were fixed in 10% buffered formalin for 10 min Subsequently, samples were fixed in 10% buffered formalin for 10 min After fixation samples were washed in dH2O (2x) and stained with methylene blue (Sigma-Aldrich) for 10 sec. followed by a 3x wash with dH2O. Quantification of the number of cells on the membranes was done by taking 3 pictures of each membrane and counting the number of cells (Nikon SMZ800 microscope).
+ Open protocol
+ Expand
4

Quantifying Deciduous Tooth Root Resorption

Check if the same lab product or an alternative is used in the 5 most similar protocols
Extracted deciduous teeth were stored in 5% buffered formaldehyde. Before embedding, the teeth were washed several times in 70% ethanol, with a final wash in absolute ethanol. Then, the teeth were embedded in epoxy-resin (Epofix®; Electron Microscopy Sciences, Fort Washington, PA), and each tooth was cut sagittally, in a bucco-lingual direction into halves in a Leitz low-speed saw microtome. From the central part of the teeth, three sections were cut with a thickness of 110 μm. All sections were photographed with fiber-optic surface illumination in a Nikon SMZ800 microscope equipped with a Nikon Digital Sight DS-F1 camera. The slanted root resorption evident on the most central cut of the tooth was used as gold standard (Fig. 2).

Microscopic image of an extracted deciduous canine showing slanted root resorption and how the root length measurements from cemento-enamel junction (CEJ) to the most resorbed (MR) side and from CEJ to the less resorbed (LR) root side were measured

+ Open protocol
+ Expand
5

Escape response and heartbeat analysis in larval zebrafish

Check if the same lab product or an alternative is used in the 5 most similar protocols
By gently touching the caudal fin with a pipette tip, the escape or startle response of 16 larvae in a 96 well plate was examined and manually recorded using an Olympus SZX16 fluorescent microscope. This locomotor response was classified into normal, reduced or absent
16 (link)
. For heartbeat analysis, larvae were placed into methylcellulose followed by a 10-second desensitization period. Heart rate was observed using a Nikon SMZ800 microscope and manually counted for 30 seconds. The number of beats was multiplied by 2 to calculate the heart rate per minute.
+ Open protocol
+ Expand
6

Aortic Ring Angiogenesis Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Aortae were isolated from mice (8 weeks old) and cut into ~25 rings each. Aortic rings were embedded in matrigel (356234, BD Biosciences, Franklin Lakes, NJ), and stimulated with 30 ng/ml VEGF-A165(450–32, Peprotech). Images were taken after 24 hr with a Nikon SMZ800 microscope.
+ Open protocol
+ Expand
7

Quantitative Kidney Histology Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Periodic acid-Schiff-Hematoxylin stained kidney sections were imaged using either a Nikon Eclipse TE2000-S or a Nikon SMZ800 microscope. Images were acquired and background-corrected using Nikon NIS Elements software (Version 4.60) and all images were color-adjusted in an identical fashion in open source ImageJ software (Version 2.0.0).
+ Open protocol
+ Expand
8

Quantifying Periodontal Bone Heights

Check if the same lab product or an alternative is used in the 5 most similar protocols
Periodontal bone heights (i.e., the distances from the cement–enamel junction [CEJ] to the alveolar bone crest [ABC]) were measured in defleshed maxillae under a Nikon SMZ800 microscope using a 40x objective. Briefly, images of the maxillae were captured using a Nikon Digital Sight DS-U3 camera controller and CEJ–ABC distances were measured at 14 predetermined sites [41 (link)] or, in the case of split-mouth experiments, at 6 predetermined sites [42 (link)] using NIS-Elements software (Nikon Instruments). For calculating change in bone levels (e.g., relative bone loss in CD18−/− mice versus WT controls), the 14-site (or 6-site) total CEJ-ABC distance for each mouse was subtracted from the mean CEJ-ABC distance of control mice. The results are presented in mm; negative values indicate bone loss and positive values indicate bone gain relative to controls. In experiments involving split-mouth design (treatments with drug vs. control in opposite halves of the maxilla), the data shown involve measurements for each hemi-maxilla.
+ Open protocol
+ Expand
9

Immunolocalization of PtFLA6 in Bent Stems

Check if the same lab product or an alternative is used in the 5 most similar protocols
Segments (0.5 cm) of the bended stems for two weeks were fixed overnight in 4% paraformaldehyde in 0.1 M phosphate-buffered saline (PBS, pH 7.5). Sections (10 µm) were cut out and blocked with 5% bovine serum albumin (BSA) for 1 h at room temperature. Then the sections were incubated with the PtFLA6 antibody (diluted at 1:50 with 0.1 M PBS containing 0.1% BSA) at room temperature for 1 h. After rinsed three times in PBS (5 min each), the samples were immersed in the alkaline phosphatase-conjugate secondary antibody (diluted at 1:100) for 1 h and then stained with 150–200 µl of Western Blue (Promega, USA). When blue color appeared, images were captured under bright field using the ECLIPSE 80i microscope (Nikon, Japan) or SMZ800 microscope (Nikon, Japan). Pre-immune serum was used as the negative control.
+ Open protocol
+ Expand
10

Quantitative Myocardial Infarct Evaluation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffinized hearts were transversely sectioned, in entirety, from apex to base, after which eight 4 µm-thick sections from equidistant (∼0.8 mm) intervals were placed on microscope slides. The slides were stained with Masson trichrome to quantitatively assess scar size (Leach et al., 2017 (link)). Briefly, trichrome-stained sections were examined with a Nikon SMZ800 microscope and photographed at 10× magnification using a SPOT Insight camera (Nikon Instruments). MIQuant software was used to quantitate infarct size in sections between the apex and the ligation suture site, as previously described (Leach et al., 2017 (link)). Results were expressed as the average percentage of area and midline length around the left ventricle.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!