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53 protocols using stat6

1

Signaling Pathway Activation in Macrophages

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WT and Dgkζ-/- BMMs treated with 100 ng/ml LPS, 100ng/ml IFNγ or 50 ng/ml IL-4 for the indicated time points were lysed in RIPA buffer (20 mM Tris-HCl, pH 7.5, 150 mM NaCl 1 mM EDTA, 1 mM EGTA, 1% Nonidet P-40, 1% sodium deoxycholate) supplemented with protease/phosphatase inhibitor cocktail (Pierce). The protein lysates were resolved by SDS-PAGE and electro-transferred into nitrocellulose membranes and probed with specific antibodies. The following antibodies were used: phospho-STAT1 (7649, Cell Signaling Technology), STAT1 (9172, Cell Signaling Technology), phospho-STAT3 (9145, Cell Signaling Technology), STAT3 (4904, Cell Signaling Technology), phospho-STAT6 (9361, Cell Signaling Technology), STAT6 (5397, Cell Signaling Technology), phospho-AKT (4060, Cell Signaling Technology), AKT (2966, Cell Signaling Technology), phospho-p38 MAPK (9216, Cell Signaling Technology), p38 MAPK (9219, Cell Signaling Technology), phospho-GSK3β (9336, Cell Signaling Technology), GSK3β (9315, Cell Signaling Technology) and β-Actin (A5441, Sigma).
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2

Cytokine Array and Cell Signaling Analysis

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Chicken egg ovoalbumin (OVA), Aluminum hydroxide Gel (13 mg/ml) were purchased from Sigma (St Louis, USA). Quantibody Mouse Cytokine Array 1 kit was purchased from RayBiotech Inc. (Norcross, USA), ELISA kits were purchased from R&D (Minneapolis, MN, USA). Antibodies for anti-CD3 (FITC), anti-CD4 (PE-Cy7), anti-IL-4 (PE), anti-IFN-γ (APC), PE-Rat IgG1, APC-Rat IgG1, κ isotype control were purchased from BD Biosciences (Franklin Lakes, New Jersey, USA). Anti-STAT4, STAT6, phosphorylated STAT4, phosphorylated STAT6, GAPDH, antibodies were purchased from Cell Signaling Technology (Danvers, USA). All other chemicals and reagents were of analytical reagent grade purchased from Sigma. Mangiferin (98.39%, HPLC), has been used elsewhere [29] (link), were obtained from Guangxi Key Laboratory of Pharmacodynamic Studies of Traditional Chinese Medicine (Nanning, China). Dexamethasone was purchased from Zhejiang Xianju Pharmaceutical co., LTD (Hangzhou, China),
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3

Western Blot Analysis of TSLP, STAT6, and IL-13Rα1 Expression

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NECs were homogenized and lysed in RIPA lysis buffer (Sigma-Aldrich; Merck KGaA) with protease and phosphatase inhibitors. Protein concentration was determined using BCA reagent (Beyotime Institute of Biotechnology). Protein samples (40 µg) were separated by SDS-PAGE on 12% gel, and subsequently transferred onto polyvinylidene difluoride membranes. The membranes were then blocked in 5% low-fat milk for 1 h at room temperature, following which the membranes were incubated with primary antibodies at 4°C overnight, followed by incubation with a goat anti-rabbit secondary antibody (1:10,000; cat. no. 926-32211; LI-COR Biosciences) at room temperature for 2 h. The membranes were washed with TBS with 0.1% Tween-20 and scanned using an Odyssey infrared scanning device (LI-COR Biosciences). The Odyssey® CLx Imaging System (LI-COR Biosciences) was used to detect the expression level of each protein. Rabbit anti-mouse TSLP (1:1,000), STAT6 (1:1,000), p-STAT6 (1:1,000) and GAPDH (1:1,000) antibodies were purchased from Cell Signaling Technology, Inc. Rabbit anti-mouse IL-13Rα1 (1:1,000) antibodies was purchased from Affinity Biosciences. Band intensities (gray values) were measured with ImageJ 1.52 (National Institutes of Health), and GAPDH was used as the internal reference.
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4

Protein Expression Analysis in Liver Tissues

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Liver tissues and cellular proteins were extracted with ice-cold lysis buffer [1% Triton X-100, 0.5% sodium deoxycholate, 0.1% SDS, 10% glycerol, 137 mM sodium chloride, and 20 mM Tris (pH 7.4)]. Proteins (20 µg) were separated by 10% SDS-PAGE and transferred to polyvinylidene difluoride nitrocellulose membranes. Phospho-STAT1, STAT1, phospho-STAT6, STAT6, phospho-AMPK, AMPK, phospho-AKT, AKT, Bcl-2, Bcl-xl, and β-actin rabbit mAbs (Cell Signaling Technology, MA, USA) were used. HRP-conjugated goat anti-rabbit IgG (Cell Signaling Technology, MA, USA) was used as the secondary antibody.
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5

Macrophage Polarization Assay

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The following chemicals were used: 3-methylcholanthrene (MCA), NaCl, NH4Cl, NaHCO3 Hank's BSS without Ca2+ and Mg2+, Trypsin-EDTA solution (T3924) and LPS from Sigma-Aldrich (Munich, Germany), Dulbecco's PBS (Gibco, Life Technologies, Carlsbad, CA, USA), Hank's buffer, Sybr Green from Bio-Rad (California, USA), Tris (Carl Roth) NFκB inhibitor #sc-3060 from Santa Cruz (Texas, USA), and GKT 137928 from Genkyotex (Switzerland). IL4, IL13, and IFNγ were purchased from PeproTech (NJ, USA). The following antibodies were used: anti-β-actin (AC-15) from Sigma-Aldrich (Munich, Germany), pSTAT6, STAT6, pSTAT1, and STAT1 from Cell Signaling (Danvers, MA, USA), and p65, β-tubulin, and topoisomerase from Santa Cruz (Texas, USA). YM1 was from Chemicon-Millipore (Darmstadt, Germany), and YY1 was from Bethyl Laboratories (Texas, USA).
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6

Immunoblot Analysis of Signaling Proteins

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Lysates were resolved by electrophoresis, transferred to polyvinylidene difluoride membranes, and probed with antibodies directed against phosphorylated (Thr202/Tyr204) ERK 1/2, ERK 1/2, phosphorylated (Tyr641) STAT6, STAT6, WDR5 (Cell Signaling Technology), PTPRE (Abcam), and β-tubulin (Abcam). All results were normalized to those of β-tubulin, which was used as a loading control.
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7

Western Blot Analysis of Signaling Pathways

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Cells were harvested after 5 days of incubation at 37 °C in humidified incubator and were lysed in ice-cold radioimmunoprecipitation (RIPA) lysis buffer (Catalog No. 89901, Thermo Scientific, Rockford, USA) containing protease and phosphatase inhibitor cocktails (Roche Diagnostic, Germany). Protein concentrations were determined by BCA protein assay Kit (Catalog No. 23225, Thermo Scientific, Rockford, USA) as described by manufacturer instructions. Equal amounts of proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene difluoride membrane (PVDF). After blocking, membranes were incubated with primary antibodies such as p-p38 (9211S, Cell Signaling), p38 (9212S, Cell Signaling), P-JNK (9251S, Cell Signaling), JNK (9252S, Cell Signaling), P-JAK1 (3331S, Cell Signaling), JAK1 (3332S, Cell Signaling), P-JAK3 (5031S, Cell Signaling), JAK3 (8863S, Cell Signaling) P-STAT6 (9361S, Cell Signaling), STAT6 (9362S, Cell Signaling), p-NF-κBp65 (SC-136548, Santa Cruz), NF-κBp65 (SC-109, Santa Cruz) and GAPDH (SC-32233, Santa Cruz) at 1:1000 dilutions for overnight at 4 °C. Membranes were then washed and incubated with horseradish-peroxidase conjugated secondary antibodies (1:5000 dilutions) for 2 h at room temperature. The blots were then detected with western blot detection kit (WesternBrightTMECL, USA).
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8

STAT Signaling Pathway Antibodies

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Phospho-specific antibodies to STAT1Tyr701, STAT3Tyr705, STAT5Tyr694 and STAT6Tyr641 were from Cell Signaling Technologies (Beverly, MA, USA). STAT1, STAT3, STAT5, STAT6, JAK1, JAK2, JAK3, PTPN6, Bcl-2, c-Myc, Mcl-1 and survivin antibodies were also from Cell Signaling Technologies. Actin antibody was purchased from Santa Cruz (Santa Cruz, CA, USA). Recombinant human IL-2, IL-6 and IL-10 were from Peprotech (Rocky Hill, NJ, USA). IFN-α was purchased from Sigma Aldrich (St. Louis, MO, USA).
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9

Western Blot Analysis of Signaling Proteins

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Cell extracts were prepared using ice-cold RIPA lysis buffer (EMD Millipore, Billerica, MA, USA) containing a protease inhibitor cocktail (Sigma, St. Louis, MO, USA). The protein extracts were denatured in a boiling water bath for 5 min and then resolved by SDS-PAGE. Proteins were transferred to polyvinylidene fluoride (PVDF) membranes (EMD Millipore), which were probed with primary antibodies overnight at 4°C, followed by incubation with horseradish peroxidase (HRP)-conjugated secondary antibodies at 1:4,000 dilutions (Cell-Signaling Technology, Danvers, MA, USA) for 1 hr at room temperature. The signal of the targeted protein was developed using a chemiluminescence kit (EMD Millipore). Primary antibodies used include those against PTEN (catalog no. 9188), p-AKT (catalog no. 4060), AKT (catalog no. 4691), p-STAT3 (catalog no. 9131), STAT3 (catalog no. 4904), p-STAT6 (catalog no. 9361), STAT6 (catalog no. 9362) (Cell-Signaling Technology, Danvers, MA, USA), and GAPDH (EMD Millipore, catalog no. MAB374). To quantify the immunoblot images on unsaturated bands, densitometric analysis was performed using AlphaEaseFC (Alpha Innotech) followed by statistical evaluation.
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10

Signaling Pathway Analysis in Cells

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Recombinant human IGF2 (rhIGF2) was from R&D Systems (Minneapolis, MN, USA). Rapamycin, Entinostat, SU6656, and WAY-600 were from Selleck Chemicals (Houston, TX, USA). Cantharidic acid, Cypermethrin and BN-82002 were from Merck (Darmstadt, Germany), Endothall, RK-682, Deltamethrin, RWJ-60475, Tyrphostin 8, CinnGel, and BML-260 were from Enzo Biochemicals (New York, NY, USA). Primary antibodies used in western blot assays: IRS1 (#2382, 1:1000), IGF-1R (#3018, 1:1000), p-IGF-1R(Tyr1131)/IR(Tyr1146) (#80732, 1:1000), Akt (#4691, 1:1000), p-Akt(Thr308) (#13038, 1:1000), p-Akt(Ser473) (#4060, 1:1000), S6K (#2708, 1:1000), p-S6K(Thr389) (#97596, 1:1000), FOXO3a (#12829, 1:1000), p-FOXO3a(Ser253) (#9466, 1:1000), STAT6 (#5397, 1:1000), p-STAT6(Tyr641) (#56554, 1:1000), Src (#2109, 1:1000), p-Src(Tyr416) (#59548, 1:1000), and HDAC1 (#34589, 1:1000) were from Cell Signaling Technology (Danvers, MA, USA). Primary antibodies used in western blot assays: PPP3CB (#HPA008823, 1:1000), PPP3CA (#WH0005530M3, 1:1000), PPP3CC (#SAB1409493, 1:1000), PPP3R1 (#WH0005534M1, 1:1000), PPP3R2 (#SAB1406289, 1:1000), and β-actin (#A5316, 1:3000) were from Sigma (St. Louis, MO, USA). HRP-conjugated secondary antibodies (Goat anti-Rabbit IgG, #31460, 1:5000 and Goat anti-Mouse IgG, #31430, 1:5000) were from Thermo Scientific (Waltham, MA, USA).
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