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5 protocols using mouse igg a7028

1

Antibodies and Reagents for Protein Analysis

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The following antibodies were used in western blot, co-immunoprecipitation, immunofluorescence or IHC: anti-NAC1 (NB110-77345, Novus, Littleton, CO, USA), anti-HDAC4 (ABE262, Millpore, Billerica, MA, USA), anti-HIF-1α (#3716), anti-p-HDAC4 Ser246 (#3443), anti-Flag (#8146), anti-V5 (#13202), anti-GLUT1 (#12939), anti-lactate dehydrogenase-A (#2012), anti-14-3-3 (#8312), anti-von Hippel-Lindau (#68547), anti-GST (#2622), and anti-Myc (#2278) (Cell Signaling Technology, Danvers, MA, USA), anti-β-actin (sc-47778), anti-ubiquitin (sc-8017), anti-CD31(sc-376764) and anti-pan-Ace (Ace-K) (sc-8649) (Santa Cruz, Dallas, TX, USA), anti-HDAC6 (YT2118, Immunoway, Plano, TX, USA), mouse IgG (A7028) and rabbit IgG (A7016, Beyotime, Shanghai, China). MG132, CoCl2 and cycloheximide were purchased from Sigma-Aldrich Corporation (Sigma-Aldrich, St Louis, MI, USA). The primers and oligo DNA used in this study are listed in Supplementary Table 1.
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2

Antibody and Reagent Sources for DNA Damage Assays

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Antibodies against glutathione-S-transferase (GST, 10000-0-AP), poly (ADP-ribose) polymerase 1 (PARP1, 13371-1-AP), Flag (20543-1-AP), MYC-tag (16286-1-AP), GFP (66002-1-Ig), Ki-67 (27309-1-AP), histone-H3 (17168-1-AP), topoisomerase 1 (TOP1, 20705-1-AP), and caspase 3 (19677-1-AP) were purchased from Proteintech (Wuhan, China); PAR (AM80), β-actin (A5441), and methyl methanesulfonate (MMS, M4016) were obtained from Sigma–Aldrich (St. Louis, MO, USA); mouse IgG (A7028) and rabbit IgG (A7016) were purchased from Beyotime (Shanghai, China). Antibodies for γH2AX (ab22551), H2AX (ab229914), HMGB3 (ab75782), and Rad51 (ab63801) were obtained from Abcam (Cambridge, UK). Goat anti-rabbit IgG Alexa Fluor-488 (A-11008) and Goat anti-mouse IgG Alexa Fluor-594 (A-11030) for immunofluorescence staining were obtained from Invitrogen (Waltham, MA, USA). Olaparib (AZD2281) was purchased from Selleck Chemicals (Houston, TX, USA).
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3

Comprehensive Antibody and Reagent Sourcing

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Antibodies against GST (10000-0-AP), poly (ADP-ribose) polymerase 1 (PARP1, 13371-1-AP), Flag (20543-1-AP), MYC-tag (16286-1-AP), GFP (66002-1-Ig), Ki-67 (27309-1-AP), PBK (16110-1-AP), XIAP (10037-1-Ig), Bcl-XL (26967-1-AP), Lamin B1 (12987-1-AP), p65 (66535-1-Ig), and caspase 3 (19677-1-AP) were purchased from Proteintech (Wuhan, China); β-actin (A5441) was obtained from Sigma-Aldrich (St. Louis, MO, USA); The mouse IgG (A7028) and rabbit IgG (A7016) were purchased from Beyotime (Shanghai, China). Antibodies for IκBα (ab32518), TRIM37 (ab264190), and GAPDH (ab8245) were obtained from Abcam (Cambridge, UK). Cleaved caspase 3 (9661) and p-IκBα (2859) were obtained from Cell Signaling Technology (Danvers, MA, USA). p-Thr (sc-5267), p-Ser (sc-81514), and p-Tyr (sc-7020) were purchased from Santa Cruz (Dallas, TX, USA). Goat anti-mouse IgG Alexa Fluor-594 (A-11030) for immunofluorescence staining was obtained from Invitrogen (Waltham, MA, USA). Olaparib (AZD2281), JSH-23 (S7652), and OTS514 (S7652) were purchased from Selleck Chemicals (Houston, TX, USA).
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4

Western Blot Analysis of Protein Markers

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The primary antibodies used in this study were at the dilutions of 1:1000 as follows: SFRS8 (24705‐1‐AP, ProteinTech Group, China; ab72044, Abcam, UK); poly ADP‐ribose polymerase (PARP) (9542S, Cell Signaling Technology, USA); β‐catenin (51067‐1‐AP, ProteinTech Group, China); β‐actin (4970S, Cell Signaling Technology, USA); Alix (2171S, Cell Signaling Technology, USA); CD9 (13174S, Cell Signaling Technology, USA); Calnexin (10427‐2‐AP, ProteinTech Group, China); Ubiquitin (10201‐2‐AP, ProteinTech Group, China); HA (51064‐2‐AP, ProteinTech Group, China); DYKDDDDK (98533S, Cell Signaling Technology, USA). The anti‐DYKDDDDK antibody (101274‐mm05t, Sino Biological, China) was at the 1:50 dilution, and Goat pab to Ms IgG (FITC) (ab6785, Abcam, UK) was at the 1:200 dilution. The second antibodies Goat anti‐Rabbit IgG(H+L) HRP (FMS‐Rb01, Fcmacs) and goat anti‐Mouse IgG (H+L) HRP (S0002, Affinity) were in 5 000 diluted concentrations.
Doxycycline (DOX), rabbit IgG (a7016) and mouse IgG (a7028) were purchased from the Beyotime (Shanghai, China). Puromycin was obtained from Merck KGaA (Darmstadt, Germany). Diphenyltetrazolium Bromide (MTT) was purchased from Solarbio (Shanghai, China). Methyl 3‐{[(4‐methylphenyl) sulfonyl] amino}benzoate (MSAB) was purchased from Selleck (Shanghai, China). GW4869 was purchased from MedChemExpress (Monmouth Junction, NJ, USA).
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5

Investigating Viral Immune Evasion Mechanisms

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5′-pppRNA and poly(I:C) were purchased from InvivoGen, and were used at a final concentration of 0.5 µg/mL and 10 µg/mL, respectively. MG132, IFN-β, IFN-β ELISA kit, Glutathione-Sepharose, and the Dual-Luciferase Reporter Assay System were purchased from Sigma Aldrich, R&D Systems, PBL Interferon Source, GE Healthcare, and Promega, respectively. Antibodies against the following IAV proteins were generated in our Laboratory: PB2, PB1, PA, and NP. Anti-TRAF3 (sc-6933), anti-TRIM35 (sc-100880), and anti-ubiquitin (sc-8017) were from Santa Cruz. Anti-TRAF3 (4729), anti-MAVS (24930), anti-K63-linkage specific polyubiquitin (5621), anti-K48-linkage specific polyubiquitin (8081) were from Cell Signaling. Anti-Flag (F1804; F7425), anti-Myc (C3965; M4439), anti-V5 (V8012), and anti-TRIM35 (SAB2103161) were from Sigma Aldrich. Anti-IFITM3 (11714-1-AP), anti-HA (51064-2-AP), and anti-GAPDH (10494-1-AP) were from Proteintech. Anti-V5 (AB3792) was from Millipore. Anti-GFP (ab6556), and anti-GST (ab58626) were from Abcam. Mouse IgG (A7028) was from Beyotime. Alexa Fluor 633 goat anti-mouse IgG (H + L) (A21050) and Alexa Fluor 488 donkey anti-rabbit IgG (H + L) (A21206) from Life Technologies were used for confocal microscopy. DyLight 800 goat anti-mouse IgG (H + L) (072-07-18-06) and DyLight 800 goat anti-rabbit IgG (H + L) (072-07-15-06) were from KPL.
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