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3 protocols using af 413 na

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Antibody-Based Histology and Cell Staining Protocols

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The following antibodies for histology and cell staining were purchased from Santa Cruz Biotechnology: anti-MUC5AC (Santa Cruz, CA, sc-16903, AB_649616), anti-phospho-PI3K p85α (Tyr467: Santa Cruz, CA, sc-293115, AB_10844180), anti-PI3K p85α (Santa Cruz, CA, sc-31970, AB_2268186), anti-phospho-Akt1 (Thr308: Santa Cruz, CA, sc-135650, AB_2224730), anti-Akt1 (Santa Cruz, CA, sc-1618, AB_630849), anti-phospho-NFκB p65 (Ser536: Santa Cruz, CA, sc-33020, AB_2179018), anti-NFκB p65 (Santa Cruz, CA, sc-109, AB_632039), anti-Lyn (Santa Cruz, CA, sc-15, AB_2281450), and anti-β-actin (Santa Cruz, CA, sc-130656, AB_2223228). The following antibodies for histology were purchased from Abcam Biotechnology: anti-BIP (Abcam, ab21685, AB_2119834), anti-CHOP (Abcam, ab11419, AB_298023), anti-histone H3 (Abcam, ab1791, AB_302613), and anti-IL-13 (Abcam, ab133353, AB_11157609). Anti-phospho-Lyn (Tyr416: Cell Signaling Technology, #2101, AB_331697) was purchased from Cell Signaling Technology. Anti-IL13 (R&D Systems, AF-413-NA, and AB_2124173) and IL-13 ELISA reagents (R&D Systems, M1300CB) were purchased from R&D Systems. IL-13 (PeproTech, #200-13), 4-Phenylbutyric acid (4-PBA, Sigma-Aldrich, P21005), PI3K Inhibitor PI-103 (Selleck, S1038) were purchased as indicated. A nonsilencing siRNA control and a Lyn-specific siRNA were purchased from Santa Cruz Biotechnology (Santa Cruz, CA).
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Differentiation of Bone Marrow Macrophages

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Bone marrow cells from 8- to 12-week-old male or female mice were cultured in DMEM (Corning, catalog 10-013) supplemented with 10% heat-inactivated FBS, 1× of penicillin streptomycin l-glutamine, and 10 μg/mL of macrophage colony-stimulating factor (Miltenyi Biotec, catalog 130-101-706). Adherent monocytes were left to differentiate into macrophages for 5 days with medium change once after 3 days of culture (52 (link)). BMDMs were harvested and plated in 48-well plates (2 × 105 cells per well) a day before coculturing with CD8+ T cells isolated from the spleen in a 1:1 ratio. Anti–IL-13 (1 μg/mL; R&D Systems, catalog AF-413-NA) or control IgG (R&D Systems, catalog AB-108-C) were added in some wells. Forty-eight hours later, cells were collected for flow cytometric analysis of intracellular IL-10.
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Immunohistochemical Analysis of Mouse Liver

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After sacrifice, the mouse livers were immediately fixed in 4% paraformaldehyde and then paraffin-embedded. Liver sections of 4 μm were prepared. Endogenous peroxidase was blocked with 3% hydrogen peroxide (H2O2). Anti-IL-13 (AF-413-NA, R&D Systems), antismooth muscle actin alpha (α-SMA) (BM0002, BOSTER), or anti-tTG (sc-20621, Santa Cruz Biotechnology) primary antibody was diluted in 50-fold. IL-13, α-SMA, and tTG expressions were detected using GTVision II Detection System/Mo&Rb (Gene Tech (Shanghai) Co., Ltd.) according to the manufacturer's instructions.
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