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11 protocols using capto core 700

1

Protein Purification using Capto Core

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The clarified solution was loaded at 2 mL/min on Capto Core 700 columns (GE Healthcare) mounted in series (5 × 1 mL HiTrap column and 1 × 4.7 mL HiScreen column) equilibrated with 25 mM Tris pH 6.8. The flow-through was saved, then the columns were washed with the same buffer until the Abs280nm returned to the initial baseline. The columns were regenerated with 1M NaOH, 30% isopropanol (cleaning in place or CIP) to desorb captured molecules.
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2

H7N9 Virus Purification and Quantification

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The H7N9 bulks produced in sMDCK cells were purified according to a previous study [22 (link)] with the following modifications. First, 400 mL of the harvested virus was inactivated, and then the cell debris was removed using centrifugation at 1800×g for 30 min. Next, the inactivated virus was further purified using Capto Q and Capto core 700 anion exchange chromatography columns in an AKTA purifier 100 system (GE Healthcare). The flow-through virus solution was diafiltered with PBS using tangential flow filtration with a 100 kDa membrane cassette (Sartorius). Finally, this purified virus bulk was sterilized by using a 0.22 μm filter and stored at 4 °C. The amount of HA antigen in the bulk virus stock was calculated based on the band intensity of the viral protein on a 10% NuPAGE Bis-Tris gel (Thermo Fisher Scientific), and the amount of total viral protein was measured using a Modified Lowry Protein Assay kit (Thermo Fisher Scientific) [23 ].
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3

Purification of HPV-HIV VLP Vaccine

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A total of 108 transfected 293F cells in a 125 mL Erlenmeyer flask (30 mL culture medium/flask) were collected by centrifugation at 1500 rpm for 5 min and washed twice with PBS. Cell pellets were resuspended in lysis buffer formulated with 1% Triton X-100, protease inhibitor (1:100) (Millipore) and Benzonase (25 U/mL) (Millipore). Cell lysates were clarified with 0.45 µm PVDF syringe filter (Millipore). The HPV:HIV (L1:P18I10 and L1:T20) VLP samples were serially purified using cation exchange (Capto SP ImpRes, GE, Boston, MA, USA), size exclusion (Capto Core 700, GE) and affinity (HiTrap Heparin HP, GE) chromatography. The chromatographic protocols were described in our previous studies [36 (link),37 (link)] and following the manufacturer’s protocol [38 ]. The L1 protein signal in each purification step was characterized by Western blot analysis and probed with anti-HPV16 L1 antibody CAMVIR-1 [39 (link)].
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4

Scalable Nano-VLP Production Process

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Example 2

Using VLPs produced by large-scale (5 liters), nano-VLPs are produced as described below. A dead-end filtration process is configured to replace the initial low-speed centrifugation to remove cells and debris while tangential flow filtration is used instead of high-speed centrifugation to concentrate the VLPs. These changes render the process more scalable and suitable for manufacturing.

Once concentrated, the VLPs are sonicated to convert them into smaller species, termed Nano-VLPs. The process of sonication also considerably reduces their size distribution. The Nano-VLPs are then filtered through a glass-fiber, capsule filter, and subsequently subjected to flow-through chromatography using a cation-exchange membrane device (Sartobind S), and a novel CAPTO® Core 700 (GE Healthcare) column to remove nucleic acids and other smaller contaminants. The Nano-VLPs are sonicated a second time and then the bio burden is reduced by filtration through a 0.45 micron filter.

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5

Purification of BKV and JCV VP1 Proteins

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Recombinant baculovirus encoding untagged full length BKV VP1 or JCV VP1 were used to infect Sf9 insect cells in suspension at 1.5 × 106 cells/mL, the cells were incubated at 27°C with shaking at 120 RPM for 72 hr then harvested by centrifugation and stored at −80°C. Cells were re-suspended in lysis buffer (20 mM Tris-HCl pH 7.5, 1 M NaCl, 1X Roche EDTA free protease inhibitor cocktail) at a ratio of 10 mL lysis buffer per gram of cell pellet and lysed by sonication on ice then the lysate was centrifuged at 16,000 x g for 20 min at 4°C. The supernatant was layered onto 3 mL of 40% glucose made up in 1X PBS and centrifuged at 116,000 x g for 2.5 hr at 4°C. Dissolved pellet in IEX buffer A (25 mM Tris-HCl pH 8.0, 25 mM NaCl) and loaded onto a 10 mL Sepharose Q-HP (GE) column equilibrated in IEX buffer A. Column was washed with 3 CV IEX buffer A and eluted with a linear NaCl gradient from 25 mM to 700 mM NaCl across 25 CV. Pooled peak fractions and loaded onto 10 mL Capto Core 700 (GE) resin equilibrated in SEC buffer (25 mM Tris-HCl pH 8.0, 100 mM NaCl) collecting the flow-through fraction. Loaded onto a Sephacryl S500 26/60 column (GE) and collected peak fractions, concentrated with a 100,000 MWCO Amicon concentrator.
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6

Isolation of Extracellular Vesicles

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Samples containing approximately 400 μg of BSA diluted in 75 μL DPBS were aliquoted into PCR tubes containing 100 μL of DPBS-washed CaptoCore 700 (GE Biosciences) Samples were incubated at 4 °C for 30 minutes before the top 75 μL of supernatant was then removed and added to another 100 μL of DPBS-washed EV-Clean, mixed, and incubated for a further 30 minutes at 4 °C.
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7

Production and Purification of HPV Pseudoviruses

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HPV 6, −11, −16, −18, −26, −31, −33, −35, −39, −45, −51, −52, −53, −56, −58, −59, −66, −68, −69, and −70 pseudoviruses (PsVs) were produced in 293FT cells65 (link)–67 (link). The HPV16 L1 and L2 expression vector, and the pN31-EGFP used in the experiment were kindly provided by Dr. J. T. Schiller34 (link). 293FT cells were harvested at 72 h after transfection, lysed in a Dulbecco’s PBS-Mg solution cell lysis buffer comprising 0.5% Brij58 (Sigma-Aldrich), 0.2% Benzonase (Merck), 0.2% PlasmidSafe ATP-Dependent DNase (EPICENTRE Biotechnologies), and incubated at 37 °C for 24 h. Afterwards, 5 M NaCl solution was added to the samples to extract the cell lysate. The tissue culture infective dose (TCID50) of the supernatant was then measured to determine the titers of the PsVs, calculated according to the classical Reed-Muench method68 (link). For chPsVs, the mutant pAAV-HPV16L1-C175A and pAAV-HPV52L1-C428A plasmids were mixed in equal proportions for transfection into 293FT cells. These PsVs were purified using a Capto Core 700 (GE Healthcare, America). After purification, the PsVs were analyzed by TEM.
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8

Purification and Characterization of BKV VLPs

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Influenza H1, H3, and B strains were generously provided by Dr. Oretta Finco (GSK Vaccines, Siena, Italy). BKV virus-like particles were generated as previously described (Abend et al., 2017) . Briefly, sequences coding for human polyomavirus VP1 (which selfassembles into 360-mer virus-like particles) were cloned into baculovirus vectors and expressed in Sf9 insect cells. After harvest, sonicated cell lysates were clarified by centrifugation at 16,000 x g, followed by ultracentrifugation at 116,000 x g over a 40% w/v sucrose cushion. VLP-containing pellets were then resuspended in 25 mM Tris-Hcl pH 8.0 with 25 mM NaCl and subjected to anion exchange (HiTrap Q HP, GE Healthcare) and subsequent size exclusion affinity (CaptoCore 700, GE Healthcare) chromatography. Eluted fractions were pooled and concentrated, VLP integrity was confirmed via negative staining electron microscopy, and samples were frozen at À80 C for long-term storage.
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9

Purified Inactivated ZIKV Vaccine Production

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Purified inactivated ZIKV vaccine was produced at the virus vaccine pilot facility at Bharat Biotech, Hyderabad. Virus inoculation in Vero cells was carried out at a standardized MOI of 0.01 PFU/cell and the virus was harvested at 5–6 days post-inoculation. The virus harvest was clarified with 0.45 micron filter using a tangential flow filtration (TFF) system and purified on CaptoTM Core 700 (GE Healthcare Life Sciences, Pittsburg, USA) column, concentrated by TFF and inactivated with 0.04% of formalin for 7 days at 22 °C in the presence of added stabilizers. Formalin was removed by diafiltration. Residual formalin content in the inactivated vaccine was estimated with acetylacetone reagent as described in the monograph 2.3.20, IP, 7th edition, p99, 2014 and was below the specified limit of 0.01% w/v (WHO, TRS 963, Annexe 1, 2011). Inactivation was considered as complete when no infectious particle could be detected by plaque assay after three serial amplifications of the sample (1:3 diluted with DMEM) in vitro in Vero cells for 7 days. The purified inactivated ZIKV antigen was formulated with 0.25 mg aluminum per dose using aluminum hydroxide (2% Alhydrogel, Brenntag Biosector, Denmark).
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10

Large-Scale Influenza Virus Production

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sMDCK cells were cultured in a 40 L bioreactor (Bio-510, NBS, USA) for 72 h and inoculated with virus prepared in SPF eggs at 33 ± 1°C. To remove host cell protein and DNA, the harvest was clarified by depth filtration (PALL, USA), treated with benzonase, and purified by CaptoTM Core 700 (GE, USA) and CaptoTM Q (GE, USA). β-Propiolactone (Serva, Germany) was added to inactivate the virus. The solution (containing 128 μg/mL hemagglutinin [HA]) was stored at 4°C in phosphate-buffered saline (PBS). The placebo in this study was the PBS that was used to dilute the solution.
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