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21 protocols using h1975

1

Cell Line Authentication and Cultivation for Cancer Research

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A549, H1975, HCC827, H2030, and UMC-11 cell lines were obtained from Cobioer Biosciences (Nanjing, China). A549 and H2030 harbor mutations in KRAS; H1975 and HCC827 harbor EGFR mutations. Authentication of A549, HCC827, and H1975 cell lines was performed using short tandem repeat (STR) DNA profiling at Cobioer Biosciences in 2017. Authentication of H2030 and UMC-11 cell lines was performed using STR in 2019. All cell lines were maintained in RPMI-1640 (Hyclone, Omaha, NE, USA) supplemented with 10% fetal bovine serum (FBS; Gibco, Grand Island, NY, USA) and 100 U/mL penicillin/streptomycin (Hyclone, Logan, UT, USA). All cell lines were passaged for less than 2 months after thawing. For the experiments that required IFN-γ treatment, the cell cultures were supplemented with the indicated amount of IFN-γ (100–2000 IU/mL).
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2

Characterization of Lung Adenocarcinoma Cell Lines

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Human lung adenocarcinoma A549 (ATCC Catalog No. CRL-7909, RRID: CVCL_0023), HCC827 (KCLB Catalog No. 70827, RRID: CVCL_2063), H1975 (ATCC Catalog No. CRL-5908, RRID: CVCL_1511), H2228 (ATCC Catalog No. CRL-5935, RRID: CVCL_1543), H1573 (ATCC Catalog No. CRL-5877, RRID: CVCL_1478), H2444 (ATCC Catalog No. CRL-5945, RRID: CVCL_1552), and UMC-11(ATCC Catalog No. CRL-5975, RRID: CVCL_1784) cell lines were obtained from Cobioer Biosciences. Short tandem repeat (STR) analysis was performed for A549, HCC827, and H1975 cell lines in 2017 and other cell lines in 2019 (Cobioer Biosciences). All of the cell lines were confirmed to be mycoplasma negative (Biothrive Sci. & Tech. Ltd.). Lung adenocarcinoma cells were maintained as a monolayer culture in RPMI1640 (GIBCO) supplemented with 10% FBS (GIBCO) and 1% penicillin/streptomycin (Hyclone).
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3

Culturing Lung Cancer Cell Lines

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The BEAS-2B cell line was purchased from the Cell Bank of Kunming Institute of Zoology and cultured in BEGM media (Lonza, CC-3170). Lung cancer cell lines, including A549, HCC827, H1299, and H1975, were purchased from Cobioer, China, with STR documents, and were cultured in RPMI-1640 medium (Corning) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin.
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4

Genetic Manipulation of PAQR4 in Lung Cells

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Independent shRNAs targeting PAQR4 were constructed using a pLKO.1 vector. The two independent PAQR4 targeting sequences are: shRNA#1, 5'-GCAGGCTCCGTGCTCTATCAC-3'; shRNA#2, 5'-CGTCTTGCTCTGAGAGTTCAA-3'. The pNFE2L2 (NRF2)-ENTER (Gene ID: NM_006164) and pKEAP1-ENTER (Gene ID: NM_203500) plasmids were purchased from Vigene Biosciences Inc., and were sub-cloned into pCDNA3.1. Nrf2 was N-terminal tagged with 6×Myc, and Keap1 was N-terminal tagged with 3×HA. The full length cDNA of PAQR4 (Gene ID: NM_152341.5) was synthesized by Shanghai Generay Biotech, and sub-cloned into pCDH-MSCV-E2F-eGFP lentiviral vector or pCDNA3.1 vector with a 3×Flag at the C-terminus. The lentiviruses were generated according to the manufacturer's protocol, stable cell lines were generated by lenti-viral infection. The BEAS-2B cell line was a gift from Dr. Hongbin Ji at SIBS, CAS, China. HEK-293T was obtained from ATCC. A549, H1299, H1975, H1650 were purchased from Cobioer, China with STR document, BEAS-2B, A549, H1650, H1975, H358, GLC-82 and SPC-A1 cells were cultured in RPMI1640 medium (Corning) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin. H1299 and HEK-293T cells were cultured in DMEM medium (Corning).
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5

Lung Cancer Cell Line Characterization and Treatment

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Human lung adenocarcinoma A549, H1975, and HCC827 cells were obtained from Cobioer Biosciences (Nanjing, China). Authentication of these cell lines was performed by short tandem repeat (STR) DNA profiling by Cobioer Biosciences in July 2017. All of the cell lines were passaged for fewer than four months. The cells were grown in RPMI 1640 medium supplemented with 10% fetal bovine serum (GIBCO, Grand Island, NY, USA) and 1% penicillin/streptomycin (Hyclone, Logan UT, USA). Lung cancer cells were treated with PGE2 (MedChem Expression, Monmouth Junction, NJ, USA) or Sulprostone, Butaprost and CAY10598 (Cayman Chemical, Ann Arbor, MI, USA), which are selective agonists for EP1/EP3, EP2, and EP4, respectively. The inhibitors celecoxib (COX-2), GDC-0068 (AKT) and LY294002 (PI3K) were obtained from MedChem Express. All of the EP agonists and inhibitors were dissolved in dimethyl sulfoxide (DMSO). The final concentration of DMSO in cell culture did not exceed 0.1% (v/v). The cells in the experiments that were treated with DMSO alone served as the vehicle control (blank).
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6

Cell Line Cultivation and Characterization

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The BEAS-2B cell line was purchased from the Cell Bank of theKunming Institute of Zoology and was cultured in BEGM media (Lonza, CC-3170). Lung cancer cell lines, namely, h1650, A549, SPC-A1, and H1975, were purchased from Cobioer, China with STR documents, and were cultured in RPMI-1640 medium (Corning) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin.
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7

Cell Culture Protocols for Lung Cancer

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The BEAS-2B cell line was purchased from cell bank of Kunming Institute of Zoology, and cultured in BEGM media (Lonza, CC-3170). Lung cancer cell lines, including A549, H1650 and H1975 were purchased from Cobioer, China with STR document, A549, H1650 and H1975 cells were all cultured in RPMI1640 medium (Corning) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin.
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8

Lung Cancer Cell Line Transfection

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The BEAS-2B cell line was purchased from the Cell Bank of Kunming Institute of Zoology and cultured in BEGM media (CC-3170; Lonza, Basel, Switzerland). Lung cancer cell lines, including A549, H1299, H358, HCC827, SPC-A1, H1650, and H1975, were purchased from Cobioer (Nanjing, China), with STR document, and were cultured in RPMI-1640 medium (Corning, Corning, NY, United States) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin. The normal control (NC), miR-125b-5p mimics, and miR-125b-5p inhibitors were purchased from RiboBio (Guangzhou, China). Cells were transfected with the indicated miRNA mimics or NC using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, United States) and then collected for various experiments.
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9

Cell Line Culture and qRT-PCR Analysis

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Cell culture, RNA isolation, and real-time polymerase chain reaction (PCR) assay were performed as published (Shi et al., 2019 (link)). The BEAS-2B cell line was purchased from the cell bank of Kunming Institute of Zoology and cultured in BEGM media (Lonza, CC-3170). HEK-293T was obtained from ATCC. Lung cancer cell lines, including A549, H1299, and H1975, were purchased from Cobioer (China) with STR documents; A549, H1299, and H1975 cells were all cultured in RPMI 1640 medium (Corning) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin. HEK-293T cells were cultured in a Dulbecco modified eagle medium (Corning). The detail information of primer used in this study are as follows: NCAPG-F: GAG​GCT​GCT​GTC​GAT​TAA​GGA, NCAPG-R: AAC​TGT​CTT​ATC​ATC​CAT​CGT​GC, TYMSOS-F: ATG​ACG​CCC​GCC​TCG​GGG​GCC, TYMSOS-R: TCA​GGA​AGG​ACG​ACC​GCA​CGG​GCA​CC, FOXM1-F: CGT​CGG​CCA​CTG​ATT​CTC​AAA, FOXM1-R: GGC​AGG​GGA​TCT​CTT​AGG​TTC, miRNA-214-3p-F TTT​TTA​CTA​CTA​TGG​CGG​GTG​ATA​AAA​CGT​GTA, miRNA-214-3p-R: GCA​AGC​TGT​AAT​CGA​CGG​GAA​GAG​CAT​GCC​CAT​CC, ACTIN-F: CTTCGCGGGCGACGAT, and ACTIN-R: CCA​TAG​GAA​TCC​TTC​TGA​CC. The expression quantification was obtained with the 2−ΔΔCt method.
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10

Lentivirus-Mediated Gene Manipulation in Cell Lines

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Independent shRNAs against different genes targeting different regions were constructed using a pLKO.1 vector. The 3XFlag C-terminal tagged forms of different overexpression genes were synthesized and cloned into a pCDH-MSCV-E2F-eGFP lenti-viral vector. All of the constructs were verified by sequencing, detailed cloning information can be provided upon request. The lenti-viruses were generated according to the manufacturer’s protocol. Briefly, supernatants containing different lenti-viruses generated from HEK-293T cells were collected 48 and 72 h post-transfection. HEK-293T was purchased from ATCC, BEAS-2B was kindly provided by Dr. Hongbin Ji at SIBS, CAS. H1975, A549, NCI-H838, H1299. and NCI-H1650 were purchased from Cobioer, China with STR document, GLC-82, SPC-A1 were gifts from Dr. Yunchao Huang, and A549-DDP was a gift from Dr. Shiyong Sun at Emory University, Atlanta, USA. All cells were cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin then incubated in a humidified atmosphere with 5% CO2 at 37 °C. Cisplatin was purchased from Sigma (Cat#p4394, USA).
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