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9 protocols using sodium hydroxide (naoh)

1

Papain Enzyme Characterization Protocol

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Carboxymethylcellulose, poly(vinyl alcohol) (98% hydrolyzed), L-cysteine hydrochloride monohydrate, dimethylsulfoxide, ethanol, sodium hydroxide, acetic acid, ethylenediaminetetraacetic acid, monosodium phosphate, and heptahydrate disodium phosphate were purchased from LabSynth (Diadema, Brazil). Papain 30.000 USP-U/mg was acquired from Merck (Darmstadt, Germany) and Nα-benzoyl-DL-arginine-p-nitroanilide hydrochloride from Sigma-Aldrich (San Luis, MO, USA). All reagents were of analytical grade.
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2

Synthesis of nano-scale zero-valent iron (nZVI)

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Ferric chloride (FeCl3 6H2O, 98%), Sodium borohydride (NaBH4, 97%), and Potassium bromide (KBr, 99%) were purchased from Sigma-Aldrich Chemical Corporation Sodium hydroxide (NaOH, 97%), ammonium chloride (NH4Cl, 99%), and sodium nitrate (NaNO3, 99%) were purchased from Labsynth and phosphoric acid (H3PO4, 95%) was purchased from J. T. Baker, Acetone (Honeyell, 100%) and deionized water were used for nZVI synthesis. For rhamnolipid production a Ca-free mineral salt medium containing glycerol as a carbon source was used (Müller et al., 2011 (link)). All of the components are of analytical grade and used without further purification. Further de-ionized water was used in all the experiments.
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3

Bone Regeneration Histological Analysis

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After 14 and 42 days after surgery, five animals from each group, per period, underwent general anesthesia with an intramuscular injection of ketamine and xilazine mixture. The samples were fixed in 10% buffered formaldehyde for a period of 72 h and then computed microtomographically. The next step was decalcification in 10% ethylenediaminetetraacetic acid (EDTA) solution containing 4.13% Titriplex® III (Merck KGaA, Darmstadt, Germany) and 0.44% sodium hydroxide (Labsynth, São Paulo, Brazil) and given sequence in standardized histological processing [8 (link),16 (link)]. Subsequently, longitudinal, semiserial sections (50 µm interval) of defects of 5 µm thickness and stained with hematoxylin–eosin were performed.
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4

Characterization of Orange Peel Bioactive Components

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Oranges (Citrus sinensis) and orange peel bagasse were purchased from a local supermarket in Campinas (Sao Paulo, Brazil). Hesperidin standard was bought from Sigma-Aldrich (St. Louis, MA, USA) at analytical grade (>97%). Calcium(II) chloride, copper(II) acetate, sodium hydroxide, and hydrochloric acid were from Labsynth (Diadema, Sao Paulo, Brazil) at practical grade. Deuterated solvent (DMSO-d6) was purchased from Sigma-Aldrich (St. Louis, MA, USA). Methanol and phosphoric acid for the UHPLC assays were analytical grade (Avantor “Performance Materials”, Mexico®, Ecatepec de Morelos, Mexico). ABIL® Care 85 (Bis-PEG/PPg-16/16 PEG/PPG16/16 Dimethicone; Caprylic/Capric Triglyceride) were sampled from the EVONIK® group (Essen, Germany). Muru muru (Astrocaryum murumuru Seed Butter), Cupuaçu butter (Theobroma grandiflorum Seed Butter), and Andiroba oil (Carapa Guianensis Seed Oil) were sampled from Amazon oil industry; Glyceryl monostearate, Mineral oil, Carbopol ULTREZ 10, Triethanolamine, and Vit E-acetate (α-Tocopheryl acetate) were bought from Fagron® (Rotterdam, The Netherlands).
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5

Demineralization and Histological Analysis

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The pieces were subjected to demineralization in EDTA solution, a solution containing 4.13% tritiplex® III (Merck KGaA, Hessen, Germany) and 0.44% sodium hydroxide (Labsynth, São Paulo, Brazil) with weekly changes of the solution for a period of approximately 40 days. Subsequently, semi-serial coronal sections were performed, considering the central region of the defect with the aid of the Leica® RM2245 semi-automatic microtome (Leica Biosystems, Wetzlar, Germany). Sections 5 µm thick (six slides with four sections each) were made for hematoxylin-eosin and Masson’s trichrome staining. Two evaluators previously calibrated and blinded in relation to the groups and periods performed the constant analyses in the methodology.
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6

Synthesis and Characterization of Photosensitizers

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5(6)-Carboxyfluorescein (CF), diethylenetriaminepentaacetic acid (DTPA), glucose, methylene blue (MB), Sephadex G-50, sodium dodecyl sulfate (SDS), sucrose, glucose and Triton X-100 were purchased from Sigma Aldrich. Chloroform, hydrochloric acid, sodium chloride, sodium hydroxide and tris(hydroxymethyl)aminomethane (Tris) were purchased from Labsynth. 1,2-Dioleoyl-sn-glycero-3-phosphocholine (DOPC) was purchased from Avanti Polar Lipids. DO15 was synthesized as in Wainwright et al., [22] Milli-Q water (Millipore) was employed in all circumstances. The molecular structures of the photosensitizers are shown in Figure 1.
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7

Synthesis of Cadmium Telluride Nanoparticles

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Briefly, in a 125 mL three-neck round-bottom flask, a desired amount of 3-mercaptopropionic acid (Sigma-Aldrich) was added to a 5 mmol L−1 cadmium acetate solution (Labsynth) in the 1 : 2.3 ratio (Cd : MPA) and the pH of that was adjusted to 8.9 using 1 mol L−1 NaOH (Labsynth). This solution was deoxygenated for 30 minutes and heated up to the water refluxing temperature. Besides, into a 50 mL Schlenk flask, tellurium 200 Mesh (6.1 g, 48 mmol), sodium (2.2 g, 96 mmol) and naphthalene (0.1 g, 0.8 mmol) were stirred in THF (20 mL) for 24 hours at 60 °C. After this time, the reaction medium was filtered, and the crude product was washed with THF (20 mL) and then dried under vacuum. After that, a 2.5 mmol L−1 sodium telluride solution (it can be substituted by commercial sodium tellurite, Na2TeO3) was prepared and added abruptly to the Cd(ii)/ligand solution. The reaction was monitored in real-time and proceeded for 140 min under refluxing.
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8

Thermal and pH Stability of BLIS

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To verify the stability of BLIS against different temperatures and pH, the method described by Todorov and Dicks32 was used. To this end, BLIS were subjected to heat treatments (30, 50, 70 or 90 °C for 1 h; 121 °C for 15 min) and pH treatments adjusted to pH 2, 4, 6, 8 or 10 with 1 N NaOH and HCl; Labsynth, Diadema, Brazil) at 30 °C for 1 h. To evaluate the proteinaceous nature of BLIS, samples were subjected to 1% (w/v) trypsin, pepsin, papain or pancreatin (Inlab, Alamar Tecno Científica Ltda, São Paulo, Brazil) and incubated at 30 °C for 2 h. After this period, the stability of BLIS was verified using the diffusion agar technique against L. monocytogenes.
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9

Melanin Content Quantification in B16-F10 Cells

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The melanin content was quantified as previously described [30] (link). The B16-F10 cells were seeded in 96-well plates (1×104 cells.mL−1), and after 24 h, they were treated with 0.5 mM Tyr (Sigma-Aldrich Germany) and 10 mM NH4Cl (Labsynth Brazil) for 48 h. After incubation, a portion of the cells was centrifuged and suspended in 1 M NaOH (Labsynth Brazil). The other portion was maintained in PBS (8 g/L NaCl, 0.20 g/L KCl, 1.15 g/L Na2HPO4, and 0.2 g/L KH2PO4) for protein quantification. Both aliquots were lysed in a Branson Sonifier 450 (USA) at 20 W for 30 sec. The melanin was quantified by measuring the absorption at 470 nm in a Tecan Infinite 200M plate reader using a standard curve for commercial melanin (Sigma Aldrich Germany) [30] (link). The total protein content was determined using the Bradford method [31] (link). Melanin is expressed as µg of melanin/mg of protein.
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