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8 protocols using clone rtk2758

1

Detection of dsDNA in 4T1 Cells

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4T1P and 4T1M cancer cells were washed and fixed with 4% PFA (Electron Microscopy Sciences, Cat# 15710), 5% sucrose (Merck KGaA, Cat# S0389) in PBS for 15min at RT, following permeabilization and blocking with 0.1% Tween-20 (Santa Cruz Biotechnology, Inc, Cat# sc-29113), 5% BSA (MP BIOMEDICALS, Cat# 02160069) and 25mg/ml glycine (MP BIOMEDICALS, Cat# 808822) for 30min on ice. Anti-dsDNA (0.5μg, Clone 35I9 DNA , Abcam, Cat# ab27156) or IgG2a isotype control (Clone RTK2758, BioLegend, Cat# 400501) were added for 20 min at RT, followed by a secondary antibody (Alexa Fluor 488 donkey anti rat, Invitrogen, Cat# A21208) for another 20min. At least 30,000 events were acquired using a BD CantoII flow cytometer and analyzed by FlowJo software (FlowJo, BD Biosciences). The experiment was performed using 4-5 biological repeats.
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2

Neutrophil Depletion in Pregnant Mice

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Neutrophil depletion was achieved by intraperitoneal injection of anti-Ly-6G antibodies (clone 1A8; BioLegend, San Diego, CA, USA), isotype-matched control antibodies (clone RTK2758; BioLegend), or phosphate-buffered saline (PBS) into pregnant BALB/c mice (n = 5 or 6 per group) at 24 h before nSP70 injection (that is, on GD 15).
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3

Flow Cytometry: F4/80+ Cell Analysis

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Flow cytometry was conducted at the UCSF Flow Cytometry core on a BD Fortessa instrument (see Supplemental Materials and Methods). The isotype antibody control used was APC-labeled Rat IgG2a, κ (BioLegend, Clone RTK2758). Fc-receptor blocking was performed using rat anti-mouse CD16/CD32 (BD PharMingen, Clone 2.4G2). Cells were labeled with allophycocyanin (APC)-labeled rat anti-F4/80 (BioLegend, Clone BM8, Rat IgG2a, κ) according to the manufacturer’s instructions, and the data were analyzed using FlowJo software. Before analysis, dead cells and doublets were removed using forward scatter (FSC) and side scatter (SSC) gating.
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4

Antibody panel for NK cell analysis

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The following antibodies were used in this study: BioLegend—anti-NKp46 mAb (clone 29A1.4), anti-CD3ε (clone145–2C11), anti-NK1.1 (clone PK136), anti-CD49b (clone DX5), anti-CD27 (clone LG.3A10), anti-NKG2D (clone C7), anti-CD107a/LAMP-1 (clone 1D4B); anti-CD11b (eBioscience, clone M1/70); anti-human NKp46 (461-G1,[26 (link)]); mouse IgG1, κ control for injections, rat IgG2a, κ isotype control for FACS (BioLegend, clone RTK2758). The Production of mNKp46-Ig, LIR1-Ig and mNKG2D-Ig as previously described [25 (link),27 (link),28 (link)].
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5

Monocyte CD16 Expression in IL-10

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CD14brightCD16- monocytes (2.5 × 105/500 μL) from the peripheral blood of four healthy volunteers were incubated with 25 ng/mL IL-10. In some experiments, anti-IL-10 receptor antibody (5 μg/mL) (clone 3F9, Biolegend) or rat IgG2aκ (5 μg/mL) to an irrelevant antigen (clone RTK2758, Biolegend) was added to the cultures. CD16 expression on monocytes was then measured.
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6

Flow Cytometry Analysis of Neutrophils

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Employing flow cytometry (FACSCalibur, Becton Dickinson, San Jose, CA, USA), neutrophils isolated from bone marrow were gated as Ly6G+ cells (PE anti-mouse Ly6G, 1A8, BioLegend, San Diego, CA, USA) and then LFA-1+ (PE anti-mouse CD11a/CD18, BioLegend, San Diego, CA, USA) neutrophils were quantified within this population using CellQuest Pro Pro v5.2.1 software (Becton Dickinson, San Jose, CA, USA). κ isotype control (PE Rat IgG1, RTK2071, BioLegend, San Diego, CA, USA) was run in parallel. In experiments verifying purity of isolated platelets, the following antibodies were used—anti-mouse PE CD41 antibody (clone MWReg30; BioLegend, San Diego, CA, USA), PE Ly-6G antibody (clone 1A8-Ly6g; eBioscience, San Diego, CA, USA), PE F4/80 antibody (clone BM8; eBioscience, San Diego, CA, USA), Alexa Fluor 647 Ly-6G antibody (clone 1A8; BioLegend, San Diego, CA, USA), PE IgG2a, κ isotype control antibody (clone MOPC-173; BioLegend, San Diego, CA, USA), PE IgG2a, κ isotype control antibody (clone RTK2758; BioLegend, San Diego, CA, USA).
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7

Relapsing EAE Induction and T-Cell Transfer

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Standard protocols were followed for induction of relapsing EAE (R-EAE) and adoptive transfer with polarized TH1 cells in SJL mice [23 ,30 (link)]. Anti-IL-7Rα antibody (clone A7R34; rat IgG2a) was produced at the Scripps Antibody Core facility and administered to mice i.p. 3 times per week at 200 μg/injection. A rat IgG2a isotype antibody (clone RTK2758; BioLegend) specific for KLH was similarly administered to control mice. Anti-IL-7 antibody (clone M25) was provided by Dr. Charles Surh, and an additional anti-IL-7Rα antibody (clone SB/199) was purchased from eBioscience. All antibodies were azide-free and contained <0.1 endotoxin units/μg of antibody (Limulus Amoebocyte Lysate test).
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8

Blocking LFA-1 Modulates CTL Activation

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To assess the importance of LFA-1, CTLs were pre-incubated with LFA-1 blocking antibody (20 µg/mL, Clone M17/4, BioXCell) or an IgG2aκ isotype control antibody (20 µg/mL, Clone RTK2758, BioLegend) at 37 °C for 5 min before the addition of target cells/stimulatory beads. The final concentration of antibodies during the assay was 10 µg/mL. Human LFA-1 was blocked using the anti-CD18 clone TS1/18 (20 µg/mL, Invitrogen), with a mouse IgG2a antibody (Sigma) serving as an isotype control. To induce T-cell activation independently of the TCR, CTLs were pre-incubated with phorbol myristate acetate (PMA, 20 ng/mL, Sigma Aldrich) and the Ca2+ ionophore A23187 (2 µM, Tocris Bioscience) at 37 °C for 5 min before the addition of target cells/stimulatory beads, yielding final concentrations of 10 ng/mL PMA and 1 µM A23187. Additional information about antibodies may be found in Supplementary Table 1.
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