The largest database of trusted experimental protocols

Sodium dodecyl sds polyacrylamide gel

Manufactured by Thermo Fisher Scientific
Sourced in United Kingdom

The 4–12% sodium dodecyl (SDS)-polyacrylamide gel is a laboratory equipment used in gel electrophoresis. It is a vertical polyacrylamide gel with a gradient concentration of 4% to 12% for the separation of proteins based on their molecular weight.

Automatically generated - may contain errors

3 protocols using sodium dodecyl sds polyacrylamide gel

1

Western Blot Analysis of Apoptotic Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Following cell treatments, the whole cell lysates were collected after mixing cell pellets with 100 μL of radio immune precipitation assay buffer (RIPA). Protein sample concentration was determined by using the bicinchoninic acid protein assay kit (Merck, Poole, UK). Each sample (20 μg) was electrophoresed through a 4–12% sodium dodecyl (SDS)-polyacrylamide gel (Life Technologies, Renfrewshire, UK), transferred onto a nitrocellulose membrane (Hybond-C, Amersham; UK), and probed with apoptotic antibodies (Danvers, MA, USA). GAPDH was used as a loading control (Merck, Poole, UK). Levels of protein expression were assessed using Pierce ECL Western blotting detection kit (Thermo Scientific; Leicestershire, UK). Membranes were scanned using benchtop G:box (Syngene, Cambridge, UK), and density was calculated using the ImageJ program (http://rsbweb.nih.gov/ij/ (accessed on 17 November 2022) incorporating correction of loading controls.
+ Open protocol
+ Expand
2

Western Blot Analysis of Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Following cell treatments, the whole cell lysates were collected after mixing cell pellets with 100 μL of radio immune precipitation assay buffer (RIPA). Protein sample concentration was determined by using the bicinchoninic acid protein assay kit (Pierce; USA). Each sample (20 μg) was electrophoresed through a 4–12% sodium dodecyl (SDS)-polyacrylamide gel (Life Technologies, UK), transferred onto a nitrocellulose membrane (Hybond-C, Amersham; UK), and probed with antibodies which include CD45 (PA5-95,187), JAK2 (MA5-15,632), ACTR2 (A305-216A-M), THAP3 (PA5-50,841), PBX-1 (PA5-29,674), and SEG (PA5-51,462), from ThermoFisher Scientific, UK. Other apoptotic antibodies such as caspase 3 (9662S), caspase 9 (9502S), cleaved caspase 9 (7237S), PARP (9542S), and cleaved PARP (5625S) were purchased from Cell Signaling, UK. Rabbit anti-rat HRP (ab6734) and rabbit anti-mouse HRP (58802S) antibodies were purchased from Abcam-UK. CRISPR-Cas9 (NBP2-36,440) was purchased from Novus. GAPDH was used as a loading control (Sigma; UK). Levels of protein expression were assessed using Pierce ECL western blotting detection kit (Thermo Scientific; UK). Membranes were scanned using benchtop G:box (Syngene; UK) and density was calculated using the image J program (http://rsbweb.nih.gov/ij/) incorporating correction of loading controls.
+ Open protocol
+ Expand
3

Quantification of Protein Expression in Transfected Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
System (Thermofisher Scientific, UK). Cells were harvested in 2% Formaldehyde, and GFP expression was quantified via flow cytometry using the FACS caliber system (BD Biosciences, UK). Data was analysed using CellQuestPro software (BD Biosciences, UK).
Fluorescent intensity is reported at 4% gating to untreated cells.
For determination of expression of the HPV-16 E6 and E7 proteins, cells were harvested in radio immune precipitation assay (RIPA) buffer 48 h following transfection. Samples (20 μg) were electrophoresed through a 4-12% sodium dodecyl (SDS)-polyacrylamide gel (Life Technologies, UK), transferred onto a nitrocellulose membrane (Hybond-C, Amersham; UK) and probed with HPV-16 E6 and HVP-16 E7 antibodies (Abcam; UK). GAPDH was used as a loading control (Sigma; UK). Levels of protein expression were assessed using an Immobilon western detection kit (Millipore; UK). X-ray films were scanned using benchtop UV transilluminators (UVP Products Ltd) and density was calculated using Image J (http://rsbweb.nih.gov/ij/) incorporating correction of loading controls.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!