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Fix perm solution

Manufactured by BioLegend
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The Fix/Perm solution is a laboratory reagent used to prepare biological samples for analysis. It serves the core function of fixation and permeabilization, allowing for the preservation of cellular structures and the subsequent access to intracellular components for further processing and examination.

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5 protocols using fix perm solution

1

Intracellular IL-17A Detection in CD4+ T Cells

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For intracellular staining, cells were first stained with ECD-labeled anti-human CD3 (Clone UCHT1, Beckman), FITC-labeled anti-human CD4 (Clone RPA-T4, Biolegend) and then fixed and permeabilized using Perm/Fix solution (Biolegend) at room temperature for 20 minutes. Cells were washed with Perm/Wash buffer (Biolegend) and stained with PE-labeled anti-human IL-17A (Clone BL168, Biolegend). Mouse IgG1 and IgG2 (BD Biosciences) were used as isotype controls. After staining, cells were analyzed with Epics XL (Beckman Coulter) and FlowJo software (Tree Star). Lymphocytes were gated according to forward and side scatter characteristics and CD4+T cells were gated based on CD3 and CD4 expression. IL-17 positive lymphocytes, CD3+, CD4+ T cells were defined by setting regions with the lower limits for cytokine positivity determined from isotype antibody.
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2

Analyzing Macrophage Autophagy in Pregnant Mouse Uterus

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A total of 4 mouse uterine tissues (day 11 of pregnancy) were taken from both groups, and mononuclear cells were separated. Mononuclear cells were incubated with anti-mouse CD16/32 (Fc block) for 10mins at room temperature to prevent non-specific binding. Cells were then incubated for 30 mins at room temperature in the following antibody cocktails: CD45-percp-Cy5.5 (Invitrogen, California, USA, 45-0451-82), CD11b-FITC (Invitrogen, California, USA, 11-0112-86) and F4/80-APC (Invitrogen, California, USA, 17-4801-82). The cells were fixed and permeabilized with Perm/Fix solution (BioLegend, USA) and were then stained with LC3B-PE (Cell Signaling Technology, USA, #8899S) after the surface staining. Stained cells were washed twice with PBS and analyzed with a FACS Calibur flow cytometer. We first gated on cells (gate P1) using forward scatter (FSC) and side scatter (SSC), then gated on CD45+ cells (gate P2), then gated on CD11b+F4/80+ cells (gate P3), and analyzed LC3B+ cells in a CD11b+F4/80+ gate. All staining was performed in accordance with manufacturer’s protocols. Isotype controls were used to confirm antibody specificity. Single colour stain controls were used to enable correct compensation.
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3

Immune Cell Analysis in EAE Mice

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Spinal cords and spleens were collected from EAE mice at Day 35 in PBS and were mechanically dissociated. Tissues from two mice belonging to the same group were then combined and passed through 100 nm filter. Spleen samples were next incubated in red blood cell lysis buffer for 10–15 min in the dark and were then washed with PBS. Cells from spinal cords and spleens were then incubated with the anti-CD4 antibody and Live/Dead®. For intracellular staining, cells were incubated in Fix/Perm solution and Perm buffer (Biolegend) and were then incubated in primary antibodies. Single staining tissue samples were used for both tissue types. Cells were gated at the Georgetown Lombardi Comprehensive Cancer Center Flow Cytometry and Cell Sorting Shared Resource (FCSR).
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4

T cell phenotyping by flow cytometry

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GLN and MLN were manually dissociated into single cell suspensions. A total of 1–2 × 106 cells were incubated with Zombie violet (BioLegend, San Diego, CA) and Fc block (anti CD16/CD32, Clone 93, BioLegend, San Diego, CA). T cell surface markers, CD4 and CD3, were detected using CD4-PerCP (1:200; Clone RM4-5; BioLegend, San Diego, CA) and CD3-APC/Cy7 (1:100; Clone 17A2; BioLegend, San Diego, CA). Cells were fixed and permeabilized using Fix/Perm solution (BioLegend, San Diego, CA). Transcription factors were detected using the following antibodies: T-bet-FITC (1:100; Clone 4B10; BioLegend, San Diego, CA), RORγT-APC (1:100; Clone B2D; Thermo Fisher Scientific, Waltham, MA), or FOXP3-PE (1:100; Clone FJK-16s; Thermo Fisher Scientific, Waltham, MA). Samples were analyzed on a BD LSR II Flow Cytometer.
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5

Phenotypic Analysis of Immune Cells

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For a phenotype analysis of cells, cells were stained with surface antibodies: CD45 (#103107, #103132, #103114), CD19 (#152403), CD3 (#100236, #103114), CD4 (#100511), CD8 (#100705, #100711, #100733), CD11b (#101212, #101207), F4/80 (#123109), CD86 (#105005), CD206 (#141703) and Ly-6G (#127606). For intracellular markers staining, cells were first treated with Fix/Perm solution (Biolegend, #420801, San Diego, CA, USA) before staining. For intracellular cytokine staining, cells were first surface-stained, and then fixed and permeabilized for subsequent intracellular staining with IL-2 (#503809), Ki-67 (#652409), IFN-γ (#505807), TNF-α (#506303) and Granzyme B (#372207). Analysis was performed using NovoCyte 2060R flow cytometer.
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