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Anti cd81

Manufactured by Santa Cruz Biotechnology
Sourced in United States, United Kingdom, Germany

Anti-CD81 is a laboratory reagent used to detect the presence of the CD81 protein. CD81 is a cell surface protein that plays a role in various cellular processes. This reagent can be used in techniques such as flow cytometry and immunohistochemistry to identify and quantify cells expressing CD81. The specific applications and intended uses of this product should be determined by the user.

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63 protocols using anti cd81

1

Quantitative Western Blot Analysis of Protein Expression

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Samples were lysed in M-PER Mammalian Protein Extraction Reagent (Thermo Scientific, catalog No. 78501) buffer containing protease inhibitors (complete, Mini, Roche Diagnostics, catalog No. 04693159001). Protein concentration was determined by Bradford protein assay (Bio-Rad). Thirty micrograms of total protein was boiled for 5 min in SDS sample buffer (Boston BioProducts, catalog No. BP-110R), resolved by the NuPAGE™ gradient 4%–12% Bis-Tris Gel (Invitrogen, catalog No. NP0321BOX) with molecular weight standards (Precision Plus Protein Standards, Bio-Rad, catalog No. 161–0374), and transferred onto nitrocellulose membranes (0.2 mm, Bio-Rad, catalog No. 162–0112). The membranes were blocked with 5% non-fat milk (LabScientific, catalog No. M08425) and incubated overnight with anti-Gluc (rabbit polyclonal, Nanolight, catalog No. 401P) antibody at the dilution 1:1000 and anti-CD81 (mouse monoclonal, Santa Cruz Biotechnology, catalog No. sc-166029) antibody at the dilution 1:200. This was followed by binding of secondary antibodies conjugated to horseradish peroxidase (HRP; donkey, anti-Rabbit IgG, GE Healthcare, NA934–1ML and sheep anti-Mouse IgG, GE Healthcare, NA931–1ML) at the dilution 1:7500 and signal detection with a chemiluminescent substrate (SuperSignal West Pico Chemiluminescent Substrate, Thermo Scientific, catalog No. 34077).
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2

Exosome Characterization via Western Blotting

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In exosome characterization, uranyl acetate solution (TAAB, England) was used for exosome staining. For the western blotting, the protein lysis buffer (St. Louis, USA), bicinchoninic acid (BCA)-assay (Cat No: DB9684-50ml, DNAbiotech Co. Tehran, Iran), polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, Massachusetts, United States), antibodies from Santa Cruz Biotechnology including anti- CD9 (sc-13118, Dallas, USA), anti-CD81(sc-166029, Dallas, USA) and anti-CD63 (sc-5275, Dallas, USA), anti-Calnexin (sc-23954, Dallas, USA) and anti-Mouse IgG (Goat), HRP Conjugated (1: 10 000; Santa Cruz, sc-2005). For RNA isolation, TRIzol (RiboEx.LS, Seoul, South Korea), isopropyl alcohol, and ethanol from Merck, Germany. The miRCURY LNA RT Kit (Cat No./ID: 339340, Hilden, Germany), miRCURY LNA miRNA Focus PCR Panel (Cat. no. YAHS-102Y, Hilden, Germany), cel-miR-39 Spike-in (Norgen Biotek, Thorold, Canada), RevertAid Reverse Transcriptase (Thermo Scientific, Kaunas, Lithuania), SYBR Green master mix (RealQ Plus 2x Master Mix Green, Ampliqon, Denmark) and primers purchased from (Macrogen, Seoul, South Korea).
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3

Extracellular Vesicle Protein Profiling

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The protein concentration of EVs was measured by a Qubit Kit (Thermo Fisher Scientific Inc., MA, USA) and the protein mixture was then separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Briefly, the proteins were separated using a precast polyacrylamide mini-gels (Tri-glycine pH 8.3) with a Mini Trans-Blot module (Bio-Rad Laboratories Inc., CA, USA). Then, the proteins on gels were then electrically transferred onto polyvinylidene fluoride membrane, which were then blocked in PBST containing 5% fat-free milk powder. After that, the membranes were incubated with the primary antibody overnight at 4 oC. The following antibodies were diluted by blocking liquid for western blot analysis, including anti-CD63, anti-CD9, anti-LRG1 (Abcam plc, Cambridge, UK), and anti-CD81 (Santa Cruz Biotechnology Inc., CA, USA). Thereafter, the membrane has been washed incubated with the secondary antibody (HRP-conjugated anti-mouse IgG or HRP-conjugated anti-rabbit IgG). Finally, the secondary antibody was washed by PBST 3 times, we used the enhanced chemiluminescence for immunodetection (PeiQing Science & Technology Co. Ltd., Shanghai, China) for imaging.
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4

Characterization of Nanoparticle Size and Exosome Markers

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The size distribution and concentration of the nanoparticles before and after treatment were characterized by NTA. Each NTA video was 60 s, and each result was averaged by at least three tests. The concentration of the preprocessed polydisperse sample in the NTA test was diluted to guarantee that there were 70 to 120 particles per frame to ensure statistics and suppress the overlapping effect. For monodisperse samples, at least 10 particles per frame were guaranteed.
For protein extraction and Western blot, plasma samples were lysed with lysis buffer and subjected to 10% SDS–polyacrylamide gel electrophoresis gels and transferred to a polyvinylidene difluoride membrane. Anti-CD63 (1:200; Santa Cruz Biotechnology) and anti-CD81 (1:200; Santa Cruz Biotechnology) antibodies were used as primary antibodies to confirm the presence of exosomes. The bound primary antibody was detected by peroxidase-conjugated goat anti-rabbit immunoglobulin G (Sigma-Aldrich) and the ECL Western blot analysis system (Millipore). Each experiment was performed at least three times.
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5

Exosomal Protein Analysis by Western Blot

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Lysates of cells or exosomes were diluted at a ratio of 1:5 with protein loading buffer (5×; Beyotime Biotechnology, Jiangsu, China) and heated at 95 °C for 5 min. Protein extracts were separated by SDS-PAGE (6% gel for DMBT1 and 12% gel for other proteins) and transferred to polyvinylidene fluoride membranes (Immobilon P, Millipore, USA). The membranes were blocked with 5% milk in TBST (Tris-buffered saline, 10 mM Tris-HCl pH 7.5, 150 mM NaCl, 0.1% Tween-20) for 60 min at room temperature, incubated with primary antibodies at 4 °C overnight and then incubated with the horseradish peroxidase-conjugated secondary antibodies at 37 °C for 1 h. Primary antibodies and dilutions were used as follows: anti-CD9 (1:500; Santa Cruz), anti-CD63 (1:300; Santa Cruz), anti-CD81 (1:500; Santa Cruz), TSG101 (1:1000; ProteinTech, Chicago, USA), anti-DMBT1 (1:5000; Abcam, Cambridge, Britain), anti-VEGF-A (1:500; R&D system, Minneapolis, USA), Akt (1:500; Cell Signaling Technology, Danvers, USA), anti-phosphorylate Akt (p-Akt; 1:500; Cell Signaling Technology) and anti-GAPDH (1:5000; Cell Signaling Technology). All the secondary antibodies (1:5000) were obtained from Cell Signaling Technology. The immunoreactive bands were visualized using enhanced chemiluminescence reagent (Thermo Fisher Scientific, Waltham, USA) and imaged by the ChemiDoc XRS Plus luminescent image analyser (Bio-Rad).
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6

Characterization of Extracellular Vesicles

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EV sample was concentrated using Concentrator plus 5305 Vacuum Centrifuge (Eppendorf AG, Germany), and protein concentration was measured with Pierce BCA Protein Assay Kit (Thermo Scientific). Concentrated sEV preparations and lysate of HCT116 cells were lysed in Pierce Lane Marker Reducing Sample Buffer (Thermo Scientific), heated for 5 min at 95 °C, and subjected to electrophoresis using 10% SDS-PAGE. Proteins were transferred to an Immobilon-P PVDF Membrane (Merck Millipore) and the excess protein binding sites on the membrane were saturated with 5% bovine serum albumin blocking buffer (1 × TBS, 0.1% Tween-20) for 1 h. The membrane was incubated overnight at 4 °C with primary antibody. The following antibodies were used: anti-CD81 (1:250, mouse, catalogue number sc166029), anti-CD63 (1:300, mouse, sc5275) from Santa Cruz Biotechnology, anti-Alix (1:20000, rabbit, ab186429) from Abcam, anti-TSG101 (1:200, mouse, 612696) from BD Biosciences, and anti-Calnexin (1:1000, rabbit, 2679) from Cell Signaling. After incubation, the membrane was washed three times with 5% TBS-Tween and then, incubated with peroxidase-labelled secondary antibody (Santa Cruz Biotechnology) for one hour. After three washes, immobilized proteins were detected utilizing Clarity Western ECL Substrate (Bio-Rad) and the UVITEC chemiluminescence imager (UVITEC Cambridge, UK).
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7

Characterization of Extracellular Vesicles

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EVs were lysed in LIPA lysis buffer (Cell Signaling Technology) for western blot analysis to confirm the characteristic EV biomarkers (CD9, CD63, and CD81). The blots were probed with flowing primary antibodies: anti-CD9 (1:500 dilution, BD Biosciences, 312102), anti-CD63 (1:500 dilution, Ancell, 215-820), and anti-CD81 (1:500 dilution, Santa Cruz Biotechnology,sc-166029). Chemiluminescence was detected using an Azure 280 imaging system (Azure Biosystems). The concentrations and sizes of EVs were determined by nanoparticle tracking analysis using Nanosight NS300 and were found to be 1.22 × 1011 particles/mL (CaOV3), 2.7 × 1011 particles/mL (OV90), 3.0 × 1011 particles/mL (ES2), and 3.8 × 1011 particles/mL (TiOSE4).
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8

Western Blot Analysis of Stress Proteins

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Protein samples were subjected to SDS-PAGE. The expression of GPX4, A20, ACSL4 were assessed by western blotting analysis and samples were normalized to β-actin. Protein extraction was blocked with 5% skimmed milk powder at room temperature for 1 h and incubated at 4°C overnight with anti-GPX4 (1:5000, Santa Cruz), anti-A20 (1:1000, Santa Cruz), anti-ACSL4 (1:1000, Santa Cruz), anti-CD81 (1:1000, Santa Cruz), anti-TSG101 (1:1000, Santa Cruz), anti-CD9 (1: 2000, CST), anti-ubiquitin (1:1000, Abcam), and anti-β-actin (1:5000, Santa Cruz) antibodies, respectively.
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9

Extracellular Vesicle Protein Analysis

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EV-containing fractions were lysed in 1X RIPA lysis buffer. Protein concentrations were determined by BCA protein assay kit (Thermo Fisher). Equivalent total protein amounts from BH and EVs were separated on 4 − 15% stain-free pre-cast SDS-PAGE gradient gels (Bio-Rad) under non-reducing conditions and transferred onto PVDF membranes (Sigma Aldrich). After 1 h blocking in 5% non-fat milk solution (Bio-Rad 170–6404) at room temperature, membranes were incubated with anti-CD63 (1:1000 dilution), anti-Bip (1:1000 dilution) (BD Biosciences 556019 and 610978, respectively), anti-CD81 (1:1000 dilution), anti-Rab27 (1:1000 dilution) (Santa Cruz Biotechnology sc23962, sc74586), anti-TSG101 (1:500 dilution), anti-CD9 (1:500 dilution), anti-Syntenin (1:500 dilution), anti-Calnexin (1:2000 dilution), or anti-GM130 (1:1000 dilution) (the last five antibodies were Abcam ab125011, ab92726, ab133267, ab22595, and ab76154) overnight at 4°C. The membrane was washed 3 times for 8 min in PBST while shaking, then incubated with HRP-conjugated secondary antibody (1:10000 dilution) (Santa Cruz Biotechnology sc-2357, sc-516102) at room temperature for 1 h. After washing again in PBST, the enzyme-linked antibody was detected by incubation with Pico chemiluminescent substrate (Thermo Fisher 34580) and recording on film (Millipore Sigma GE28-9068-38).
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10

Western Blot Analysis of Extracellular Vesicle Markers

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Cells were harvested in lysis buffer containing Complete Protease Inhibitor Cocktail (Roche) and subjected to SDS-PAGE. Cellular proteins were transferred onto a nitrocellulose membrane (Millipore) and probed for anti-TERT (#ITA7204, Geno Technology, Inc.; dilution 1:1000), anti-Myc (LSBio [LifeSpan] Cat# LS-B2791-50, RRID:AB_1934317; dilution 1:1000), anti-CD9 (Santa Cruz Biotechnology Cat# sc-13118, RRID:AB_627213; dilution 1:2000), anti-CD63 (Santa Cruz Biotechnology Cat# sc-5275, RRID:AB_627877; dilution 1:2000), anti-CD81 (Santa Cruz Biotechnology Cat# sc-166029, RRID:AB_2275892; dilution 1:2000) or anti-GAPDH (#9484, Abcam; dilution 1:5000) antibodies. After washing, the membranes were incubated with secondary antibodies. The reaction was revealed using an ECL chemiluminescence kit (Amersham Biosciences) with Eastman Kodak Co. hyperfilm and quantified by Multi Gauge software (Fujifilm Life Sciences). Data are presented as the mean ± SD, based on at least three independent repeats.
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