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18 protocols using pierce ecl substrate western blot detection system

1

Western Blot Analysis of EMT Markers

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Tissue samples were ground to powder in liquid nitrogen. Total proteins were extracted from tissue powder or treated cells using sodium dodecyl sulfate lysis buffer (Beyotime, Shanghai, People’s Republic of China) for 30 minutes at 4°C, and an equal amount of protein was separated using 10% polyacrylamide sodium dodecyl sulfate gels. Then, the proteins were transferred to polyvinylidene fluoride membranes (Thermo Fisher Scientific) and were probed with primary antibodies against E-cadherin (Abcam, Cambridge, UK), vimentin (GeneTex, San Antonio, TX, USA), TWIST1 (Abcam), N-cadherin (GeneTex), matrix metalloproteinase (MMP)-2 (Abcam), MMP-9 (Abcam), or GAPDH (Gene-Tex). The membranes were incubated overnight at 4°C, followed by incubation with secondary antibody peroxidase-conjugated anti-IgG (Abcam), and detected using a chemiluminescent detection system (Pierce ECL Substrate Western blot detection system; Thermo Fisher Scientific). Quantity One 4.5.0 software (Bio-Rad Laboratories Inc., Hercules, CA, USA) was used to quantify the integrated density of the protein bands.
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2

Protein Expression Analysis Protocol

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To analyze the protein, tissue samples, and cultured cells were dissolved using a RIPA buffer (50 mM Tris, 1.0 mM EDTA, 150 mM NaCl, 0.1% Triton X-100, 1% sodium deoxycholate, 1 mM PMSF) (Beyotime, Nantong, China). Consistently, 30 μg of protein was loaded in each lane, fractionated by SDS-PAGE, and transferred onto a PVDF membrane. Then, the membrane was incubated at 4 °C overnight with human-specific phospho-mTOR(Ser2448) (Cell Signaling, 5536), mTOR (Cell Signaling, 2983), p62 (Cell Signaling, 8025), LC3B (Cell Signaling, 3868), ATG5 (Cell Signaling, 9980), PP2AA (Cell Signaling, 2039), PP2AB (Cell Signaling, 4953), CD24 (Abcam, ab76514), phospho-AKT (Thr308) (Cell Signaling, 13038), AKT (Cell Signaling, 4685), ABCG2 (Cell Signaling, 42078), (Abcam, London, UK), β-actin (Cell Signaling, 4970), and GAPDH (Cell Signaling, 5174) antibodies. The results were visualized by a chemiluminescent detection system (Pierce ECL substrate western blot detection system, Thermo Scientific, IL, USA).
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3

Western Blot Analysis of Cell Signaling Proteins

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Cells were harvested and lysed in the RIPA buffer (Sigma-Aldrich, USA). Protein concentrations were determined using the BCA protein assay kit (Thermo Fisher Scientific, USA). Then equal aliquots of proteins were separated on 10% SDS-PAGE. Following electrophoresis, the separated proteins were transferred onto PVDF membranes (EMD Millipore, Billerica, MA, USA). Membranes were blocked with 5% bovine serum albumin in TBST and then incubated in primary antibodies overnight at 4 °C followed by secondary antibodies for 1 h at 37 °C. Primary antibodies AKT, p-AKT, Bcl-2, Bax, c-Myc, Cyclin D1 were purchased from Cell Signaling Technology (USA). MRP1 and P-gp were purchased from Abcam (Cambridge, UK). GAPDH was purchased from Sigma Aldrich (MO, USA) and used as the internal control. Finally, the signal was visualized through a chemiluminescent detection system (Pierce ECL Substrate Western blot detection system, Thermo, Rockford, IL, USA) and bands were analyzed with Image J (NIH, USA).
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4

Quantitative Western Blot Analysis

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Whole cell extracts were extracted using RIPA and protein concentrations were determined by BCA assay. Equal aliquots of 50 μg total proteins were separated by SDS‐PAGE. Then proteins were transferred to a PVDF membrane. Membranes were blocked with 5% bovine serum albumin in TBST and then incubated in primary antibodies overnight at 4°C followed by secondary antibodies for 1 h at 37°C. Rabbit polyclonal primary antibody against CXCR4 (sc‐9046), mouse monoclonal antibodies against RhoA (sc‐418), RhoGEF (sc‐166301), ROCK (sc‐17794), PI3K (sc‐166365), PAK (sc‐166174), PKN (sc‐136037), GAPDH (sc‐166545), and the horseradish peroxidase‐conjugated secondary antibodies against rabbit‐IgG (sc‐2004) and mouse‐IgG (sc‐2005) were purchased from Santa Cruz Biotechnology. The primary rabbit polyclonal antibody against ARHGAP5 was purchased from Sigma‐Aldrich. Finally, signal was visualized through a chemiluminescent detection system (Pierce ECL Substrate Western blot detection system, Thermo, Rockford, IL, USA).
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5

Western Blot Analysis of Epithelial Markers

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Proteins were extracted from cultured cells, quantitated using a protein assay (bicinchoninic acid [BCA] method; Beyotime, Shanghai, China). Proteins were fractionated by sodium dodecyl sulfate polyacrylamide gel electrophoresis, transferred to polyvinylidene fluoride (PVDF) membrane, blocked in 4 % dry milk at room temperature for 1 hour, and immunostained with primary antibodies at 4 °C over-night using anti-MTA1 (1:2000, Abcam, Cambridge, MA), anti-E-cadherin (1:1000; Abcam, Cambridge, MA), and anti-GAPDH (1:1000, Kangchen,China). The results were visualized via a chemiluminescent detection system (Pierce ECL Substrate Western blot detection system; Thermo, Rockford, IL) and exposed in Molecular Imager ChemiDoc XRS System (Bio-Rad, Hercules, CA).
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6

Quantitative Protein Analysis by Western Blot

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The proteins extracted from GC cell lines were quantified using a protein assay (Bio-Rad Laboratories, CA, USA). The protein samples (30–50 μg) were fractionated by SDS-PAGE and transferred to a nitrocellulose membrane. β-actin was used to ensure equal loading. The results were visualized using a chemiluminescent detection system (Pierce ECL Substrate Western Blot Detection System, Thermo Scientific, IL, USA) and exposure to autoradiography film (Kodak XAR film).
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7

Protein Extraction and Western Blot Analysis

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Proteins were extracted from mouse tissues and cells using RIPA buffer containing fresh protease and phosphatase inhibitors, and quantified using a protein assay (Bio-Rad Laboratories, Hercules, CA). Protein samples (30 μg) were separated by SDS-PAGE and transferred to a nitrocellulose membrane. Immunoblotting was conducted using antibodies against PTPRO (Proteintech group, #12161), LC3 (Cell signaling technology, #12741), p62 (Cell signaling technology, #5114), PI3K (Cell signaling technology, #4249), p-PI3K(Y458/Y199) (Bioworld, BS4605), p-AKT(S473) (Cell signaling technology, #9271), p-AKT(T308) (Cell signaling technology, #9275), AKT (Cell signaling technology, #9272), p-s6k (Cell signaling technology, #9205), s6k (Cell signaling technology, #9202), p-MDM4(S367) (Abcam, ab122926), MDM4 (Abcam, ab76362), MDM2 (Abcam, ab3110), p53 (Cell signaling technology, #2527), Cyclin D1 (Santa Cruz, sc-20044), Bcl-2 (Santa Cruz, sc-130307). The results were visualized using a chemiluminescent detection system (Pierce ECL substrate western blot detection system, Thermo Scientific, 32106) and exposure to autoradiography film (Kodak XAR film).
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8

Western Blot Analysis of SOX4 Expression

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The protein samples were obtained using RIPA lysis buffer. Protein concentration was calculated using bicinchoninic acid (BCA; Beyotime Institute of Biotechnology, Shanghai, China). The 25 µl protein sample was added in the protein loaded per lane. Proteins were separated through a 12% SDS-PAGE and then incubated with 5% non-fat milk blocked membranes at room temperature for 2 h. Next we incubated the membranes overnight at 4°C with anti-SOX4 rabbit polyclonal antibody (dilution, 1:1,000; cat. no. ab80261; ABCAm, Cambridge, MA, USA) anti-GAPDH mouse monoclonal antibody (dilution, 1:1,000; cat. no. 60004-1-Ig; ProteinTech, Wuhan, China) and subsequently incubated with goat anti-rabbit IgG H&L (HRP) (dilution, 1:3,000; cat. no. ab6721; ABCAm) secondary antibody. Then, the protein expression levels were measured by a chemiluminescent detection system (Pierce ECL Substrate Western Blot Detection System; Pierce; Thermo Fisher Scientific, Inc., Rockford, IL, USA). Protein expression levels were quantified using ImageJ software (National Institutes of Health, Bethesda, MD, USA).
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9

Protein Expression Analysis by Western Blot

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Total proteins were prepared and quantified using a protein assay (BCA method, Thermo, USA). Proteins were fractionated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) transferred to polyvinylidene fluoride (PVDF) membrane, blocked in 5% dry milk at room temperature for 1 hour and immunostained with antibodies at 4°C overnight using anti-SOX4 (1∶1000, CST, USA), anti-N-cadherin (1∶1000, CST, USA) and anti-E-cadherin (1∶1000, CST, USA). Anti-GAPDH (1∶5000, sigma,USA) was used as a loading control. Results were visualized through a chemiluminescent detection system (Pierce ECL Substrate Western blot detection system, Thermo, Pittsburgh, PA) and then exposed in Molecular Imager ChemiDoc XRS System (Bio-Rad, Hercules, CA).
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10

Protein Expression Analysis via Western Blot

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To get protein, tissue samples and cultured cells were dissolved by RIPA regent plus phenylmethanesulfonylfluoride (Beyotime, Nantong, China). Consistently, 30 mg of the protein was loaded each lane, fractionated by SDS PAGE, transferred onto a PVDF membrane. And then the membrane was incubated at 4 °C overnight with human-specific antibody of Myd88 (Abcam, London, UK), p-NF-κB and NF-κB (CST, Boston, MA, USA), p-AKT/AKT (Abcam, London, UK), GAPDH (CST). The results were visualized by a chemiluminescent detection system (Pierce ECL substrate western blot detection system; Thermo Scientific, Waltham, MA, USA) and exposure to autoradiography film.
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