Polymerase Chain Reaction (PCR) amplification was conducted in a total volume of 25 μl containing 1.5 μl genomic DNA, 1 μl each of forward and reverse primers (10 μmol/L), 12.5 μl 2× Flash PCR MasterMix (CWBIO, China), and 9 μl ddH2O. PCR amplification was performed with an initial denaturation at 98°C for 1 min; 35 cycles of 10 s at 94°C, 15 s at a primer-specific annealing temperature (46°C for COI, 49°C for COII, and 53°C for CytB), and extension at 72°C for 30 s; and a final elongation at 72°C for 1 min. The PCR products were visualized on 1.0% agarose gels under UV light. The sequencing reaction was carried out using an ABI BigDye Terminator version 3.1 cycle sequencing kit on an ABI 3730XL (Tsingke Biotechnology Co., Ltd., Beijing, China) for Sanger sequencing in both directions.
Abi 3730xl
The ABI 3730XL is a capillary electrophoresis instrument designed for DNA sequencing applications. It provides high-throughput and reliable DNA analysis capabilities. The core function of the ABI 3730XL is to perform automated DNA sequencing using the Sanger sequencing method.
Lab products found in correlation
2 protocols using abi 3730xl
Mitochondrial Gene Sequencing for Identification
Polymerase Chain Reaction (PCR) amplification was conducted in a total volume of 25 μl containing 1.5 μl genomic DNA, 1 μl each of forward and reverse primers (10 μmol/L), 12.5 μl 2× Flash PCR MasterMix (CWBIO, China), and 9 μl ddH2O. PCR amplification was performed with an initial denaturation at 98°C for 1 min; 35 cycles of 10 s at 94°C, 15 s at a primer-specific annealing temperature (46°C for COI, 49°C for COII, and 53°C for CytB), and extension at 72°C for 30 s; and a final elongation at 72°C for 1 min. The PCR products were visualized on 1.0% agarose gels under UV light. The sequencing reaction was carried out using an ABI BigDye Terminator version 3.1 cycle sequencing kit on an ABI 3730XL (Tsingke Biotechnology Co., Ltd., Beijing, China) for Sanger sequencing in both directions.
HCV NS5B Gene Sequencing and Genotyping
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