The largest database of trusted experimental protocols

41 protocols using ru360

1

Ru360 Embryonic Development Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ru360 (Merck, Darmstadt, Germany) was dissolved in water and used at a final concentration of 10 μM. Eggs were laid on a medium containing Ru360 and grown.
+ Open protocol
+ Expand
2

Calcium signaling pathway assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fura-2 AM, thapsigargin and all other common chemicals were obtained from Sigma-Aldrich. YM 244769, CGP 37157, N-[2-[[3-(4-Bromophenyl)-2-propenyl]amino]ethyl]-5-isoquinolinesulfonamide dihydrochloride (H89), Calphostin C, Phorbol 12-myristate 13-acetate (PMA), (9R,10S,12S)-2,3,9,10,11,12-Hexahydro-10-hydroxy-9-methyl-1-oxo-9,12-epoxy-1H-diindolo[1,2,3-fg:3′,2′,1′-kl]pyrrolo[3,4-i][1,6]benzodiazocine-10-carboxylic acid, hexyl ester (KT5720) were obtained from Tocris Bioscience. Ru360 was obtained from EMD Millipore. TSP4 proteins were expressed and purified according to our previous report (Kim et al., 2012 (link)).
+ Open protocol
+ Expand
3

Membrane Protein Activity Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
All detergents were purchased from Affymetrix, and lipids, including 1-palmitoyl, 2-oleoylphosphatidylethanolamine (POPE) and 1-palmitoyl, 2-oleoylphosphatidylglycerol (POPG) were from Avanti Polar Lipids, Inc. 45Ca2+ and 86Rb+ were obtained from PerkinElmer, and Ca2+ fluorophores were from Invitrogen. The following inhibitors were used: RR from Sigma-Aldrich, Ru360 from EMD Millipore, and CGP-37157 from Santa Cruz Biotechnology, Inc. Anti-His tag antibody was from QIAGEN (no. 34660).
+ Open protocol
+ Expand
4

Growth Characterization of N. crassa

Check if the same lab product or an alternative is used in the 5 most similar protocols
N. crassa was handled according to standard procedures. Vogel's minimal medium plus 1.5% (w/v) sucrose was used in all experiments (Davis and de Serres, 1970 (link)). Wild-type and deletion strains used in this study are listed in supplementary material Table S1. The following chemicals were used: staurosporine (LC Laboratories, Woburn, MA); DMSO, ML204, flufenamic acid and xestospongin C (Sigma-Aldrich, St Louis, MO); 4-methyl-4′-[3,5-bis(trifluoromethyl)-1H-pyrazol-1-yl]-1,2,3-thiadiazole-5-carboxanilide (YM-58483/BTP2) and 2-aminoethoxydiphenyl borate (2-APB) (Tocris Bioscience, Bristol, UK); 1,2-bis(ortho-aminophenoxy)ethane-N,N,N′,N′-tetrasodium (BAPTA), thapsigargin, Ru360, LiCl2 and 7-hydroxystaurosporine (UCN-01) (Merck Millipore, Darmstadt, Germany); 1-[6-((17β-3-methoxyestra-1,3,5(10)-trien-17-yl)amino)hexyl]-1H-pyrrole-2,5-dione (U-73122) (Alexis Biochemicals, San Diego, CA) and bafilomycin A1 (Wako Chemicals, Richmond, VA).
Mycelial extension rates at 26°C were measured after inoculating 5 µl containing 1×103 conidia onto the centre of large Petri dishes (14.2-cm diameter) containing solid minimal medium. For growth measurements in liquid minimal medium, 1×104 conidia/ml were incubated at 26°C, 100 rpm, under constant light in 96-well plates (200 µl total volume per well) and absorbance was monitored at 450 nm over 24 hours.
+ Open protocol
+ Expand
5

Quantifying Cellular ROS via Fluorescent Probes

Check if the same lab product or an alternative is used in the 5 most similar protocols
BAECs were plated at density of 5 × 104 for each well in 24-well plates. After incubation with PTH 0.1 nM for both 1 and 3 h, the cells were incubated with either 5 μM H2DCFDA (Invitrogen) for 30 min at 37°C for total ROS (tROS) detection or with 5 μM Mitosox (Invitrogen) for 10 min at 37°C for mitochondrial ROS (mROS) detection, in a humidified atmosphere (5% CO2, 95% air). After incubation, cells were washed twice with PBS, and fresh medium was added. The fluorescence was immediately measured by a plate reader (Tecan Infinite 200 Pro) using excitation/emission wavelengths of 492/520 nm for H2DCFDA and 510/580 nm for Mitosox. Then, the cells were trypsinized and collected for cytofluorimetric analysis. In some experiments, cells were also treated with either 5 μM MitoTEMPO (Sigma-Aldrich), 100 nM calcipotriol hydrate, a vitamin D analogue (Sigma-Aldrich), or 10 μM Ru360 (Merck-Millipore). MitoTEMPO was administered 30 min before PTH, while both calcipotriol hydrate and Ru360 were coadministered with PTH.
+ Open protocol
+ Expand
6

Disrupting Ca2+ Signaling Pathways in Podocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
The IP3R inhibitor Xestospongin C (XeC, ×2628, 10 μM, Sigma) [14 (link)] and the MCU inhibitor Ru360 (557,440, 10 μM, Merck, Kenilworth, New Jersey, USA) [15 (link)] were used to block ER calcium release and mitochondrial Ca2+ uptake, respectively. Podocytes were pre-treated with the above inhibitors for 60 min before treatment with ADR or Ang II, respectively. Specific siRNA targeting the bridging protein Grp75 and a non-targeted negative control siRNA were synthesized by Invitrogen. Podocytes were plated in six-well plates and treated with 100 pmol/well siRNA duplexes using 10 μl RNAiMAX reagent (Invitrogen) according to the manufacturer’s protocol. After 8–12 h, the media were changed according to the status of cell growth at 40–50% confluence. The podocytes were collected for further experiments 24 h after transfection.
+ Open protocol
+ Expand
7

Metformin and Phenformin Suspension Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Metformin and phenformin were suspended in culture medium (without FBS and penicillin) and used at the respective concentrations of 5 mM and 100 µM, unless stated otherwise. Metformin, phenformin, 2-APB, KB-R7943 and cyclosporin A were purchased from Sigma-Aldrich. RU-360 was purchased from Merck Millipore.
+ Open protocol
+ Expand
8

Multiple Myeloma Cell Lines and Inhibitors

Check if the same lab product or an alternative is used in the 5 most similar protocols
NCI-H929 and U266 multiple myeloma (MM) cells were obtained from American Type Culture Collection (Manassas, VA) and maintained in RPMI-1640 medium supplemented with 10% FBS and 1% penicillin/streptomycin/glutamine. NCI-H929 cells were also supplemented with 0.05 mM beta-mercaptoethanol. The HYD1 drug-resistant NCI-H929 cell line H929-60 was developed as previously described15 (link). The parental and drug resistant line was validated by short tandem repeat (STR) analysis. 5TGM1 myeloma cells were derived from murine myeloma 5T33 and kept in similar media as U266 cells. All cell lines were tested for mycoplasma every six months. HYD1 (kikmviswkg) and MTI-101 were synthesized by Bachem (San Diego, CA). Bortezomib was purchased from Selleck Chem. The compounds U73122 (Sigma), 2-APB (Sigma) and Ru360 (Merck Millipore) were all used to inhibit Ca2+ signaling.
+ Open protocol
+ Expand
9

Pharmacological Modulation of Neuronal LTP

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following inhibitors were used: 5 μM or 10 μM Fbp inhibitor (5-chloro-2-(N-(2,5-dichlorobenzenesulfonamido))-benzoxazole; Cayman Chemicals, Ann Arbor, MI, USA, 18860), 25 μM MCU inhibitor (Ru360; Merck KGaA, Darmstadt, Germany, 557440), 5 μM SERCA inhibitor (thapsigargin; Merck KGaA, Darmstadt, Germany, T9033). Each of the inhibitors was added to neuronal culture 30 min prior to the LTP induction.
+ Open protocol
+ Expand
10

Mitochondrial Function Modulation in Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
HEK293T cells were obtained from ATCC. HeLa cells were a gifted by Sabrina Spencer. Beige fat cells were a gift from Shingo Kajimura. Cells were maintained in Dulbecco’s Modified Eagle’s Medium (DMEM) supplemented with 10% fetal calf serum (Invitrogen), penicillin, streptomycin (100units/mL), and 1 mM L-glutamine. Cells were treated at indicated concentrations with CCCP (SigmaAldrich), valinomycin (Tocris), Antimycin (SigmaAldrich) Oligomycin (Cayman Chemical), Actinonin (Cayman Chemical), FK506 (Cayman Chemical), 1-NA-PP1 (Cayman Chemical), Bafilomycin A1 (SigmaAldrich), and Ru360 (EMDMillipore). Antibodies were purchased from the following providers: anti-PDH, Abcam; anti-Tom20, Proteintech. Fluorescent labeled secondary antibodies were purchased from ThermoFisher.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!