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2 protocols using anti ndufa9

1

Protein Quantification and Validation Methodology

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Aliquots of cell lysate (50 µg/lane) were separated by electrophoresis on 10% or 12% SDS polyacrylamide gels. Anti-phospho-STAT6, anti-STAT6, anti-phospho-SMAD2 (#3104), anti-SMAD2, anti-phospho-SMAD3, anti-SMAD3, anti-phospho-SMAD1, 5, and 9, anti-SMAD1, 5, and 9, anti-phospho-ERK1/2 (44/42 MAPK) (#4370), anti-ERK1/2 (#9102), anti-phospho-p38, anti-p38, anti-phospho-JNK, anti-JNK, and anti-SDHA (#5893) antibodies were purchased from Cell Signaling Technology (Beverley, MA, USA). Anti-NDUFA9 and COX-4 were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-UQCRC2 (ab14745) was purchased from Abcam (Cambridge, UK). Anti-ATP5A1 was purchased from Invitrogen (Thermo Fisher). Secondary antibodies (goat anti-mouse and goat anti-rabbit) were obtained from Santa Cruz Biotechnology. Images were scanned on an ODYSSEY instrument and quantified using Image Studio Digits (LI-COR Biosciences, Lincoln, NE, USA). Full length uncropped blots are presented in Supplementary Figures 1217.
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2

Mitochondrial Antioxidant and OXPHOS Protein Analysis

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Total protein concentration was determined using the Bradford assay (Cell Signaling Technology, Denver, MA, USA). Samples were resolved in 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis, transferred to 0.45-μM polyvinyl difluoride membranes, and analyzed separately. After blocking with 5% skim milk at room temperature for 60 minutes, the blots were surveyed with primary antibodies. Expression of mitochondrial antioxidant was detected using anti-Mn-SOD (Abcam, Cambridge, MA, USA). We used anti-NDUFA9 (Santa Cruz Biotechnology, Dallas, TX, USA), anti-SDHB (Abcam), anti-UQCRC2 (Abcam), anti-COXIV (Santa Cruz Biotechnology), and anti-ATP5A (Abcam) to detect the expression of oxidative phosphorylation complexes.
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