The largest database of trusted experimental protocols

Pico plus 5500 ilm afm

Manufactured by Agilent Technologies
Sourced in United States

The Pico plus 5500 ILM AFM is a high-performance atomic force microscope (AFM) designed for advanced nanoscale imaging and analysis. It features a compact and integrated design that enables precise and stable measurements. The core function of the Pico plus 5500 ILM AFM is to provide users with the ability to visualize and analyze the topography and properties of surfaces at the nanometer scale.

Automatically generated - may contain errors

5 protocols using pico plus 5500 ilm afm

1

Atomic Force Microscopy of Liposomes

Check if the same lab product or an alternative is used in the 5 most similar protocols
For atomic forced microscopy (AFM) imaging of liposomal samples, 10 µl of the samples were deposited onto freshly cleaved muscovite Ruby mica sheets (ASTM V1 Grade Ruby Mica from MICAFAB) for 15–20 minutes. Mica sheets are basically negatively charged so samples bind strongly on the mica surface. After 15 min, the samples were dried by using a vacuum dryer. Sometimes the samples were gently washed with 0.5 ml Milli-Q water to remove molecules that were not firmly attached to the mica and the samples were dried as mentioned above. Acoustic alternative current mode AFM was performed using a Pico plus 5500 ILM AFM (Agilent Technologies, USA) with a piezoscanner maximum range of 9 µm. Micro fabricated silicon cantilevers of 225 µm in length with a nominal spring force constant of 21–98 N/m were used from Nano sensors, USA. Cantilever oscillation frequency at 150–300 kHz was tuned into resonance frequency. The images (512 by 512 pixels) were captured with a scan size between 0.5 and 2 µm at a scan speed rate of 0.5lines/S. Images were flattened using Pico view1.4 version software (Agilent Technologies). Image processing and analyzation was done through Pico Image Advanced version software (Agilent Technologies).
+ Open protocol
+ Expand
2

Atomic Force Microscopy Imaging of Lysozyme Fibrils

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the AFM imaging
study, the solutions
of lyz fibrils were diluted to 100-fold with water. Then, around 5
μL of this sample solution was adsorbed onto a freshly cleaved
muscovite ruby mica sheet (ASTM VI grade Ruby Mica from Micafab, Chennai,
India). Thereafter, the mica sheet was dried for 30 min in vacuum
in an inert atmosphere. The complexes were incubated for 15 min prior
to adsorption onto the mica sheet. AFM was performed in the AAC mode
on PicoPlus 5500 ILM AFM (Agilent Technologies, USA), which was attached
with a piezo-scanner of a maximum range of 9 μm. Here, microfabricated
silicon cantilevers of NANOSENSORS (USA) were used. The resonance
frequency of the cantilever oscillation was 146–236 kHz, whereas
the force constant was 21–98 N/m. The rate of the scan speed
was 0.5 lines/s while taking the images (256 by 256 pixels). All the
images were processed by flattening using PicoView software (Agilent
Technologies, 1.1 version), whereas their manipulation was conducted
by Pico Image Advanced version software.
+ Open protocol
+ Expand
3

Oligomerization of DNA-Binding Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Oligomerization of the protein interacting with the DNA was determined using Atomic Force Microscopy (Pico plus 5500 ILM AFM (Agilent Technologies USA) operating in AAC mode). Microfabricated silicon cantilevers with resonance frequencies of 150–300 kHz and spring constants of 21–98 N/m were used to take images at scan speeds of 2 lines/second. The images were processed using Pico View 1.1 version software. Here, the control DNA (pBR322) was viewed without the protein. Purified protein was also visualized in the absence of the DNA. The DNA-protein complex was then used to visualize the increased height of the protein interacting with DNA. Nuclease-free water, filtered protein and MgCl2 were used for the experiment.
+ Open protocol
+ Expand
4

ZMYND8 Protein Purification and AFM Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the purpose of AFM experiment, recombinant ZMYND8 protein was purified from Sf9 cells. 150nM of purified recombinant protein was air dried on freshly cleaved MICA for 30sec. The mica was washed with autoclaved MilliQ-filtered water. After air drying for 3 min, sample was imaged at room temperature with Pico plus 5500 ILM AFM (Agilent Technologies USA). The images were analyzed with the help of Pico view version 1.10.1 software (Agilent Technologies).
+ Open protocol
+ Expand
5

Atomic Force Microscopy of Endosomes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Endosomes were imaged and characterized by AFM, and endosomal pellets were resuspended in autoclaved ultrapure water. Then, 5 μl of the endosomal suspension was spotted on a mica sheet (Muscovite Mica-V1, Electron Microscopy Sciences) and dried for 15 min. If required, sample spots were gently washed with autoclaved ultrapure water to remove molecules that could interfere with imaging and then dried again. AAC mode of AFM was followed using a Pico plus 5500 ILM AFM (Agilent Technologies) with a piezoscanner having a maximum range of 9 μm. Microfabricated silicon cantilevers having a length of 225 μm were used (Nano sensors). Image processing was done using Picoview 1.1 software (Agilent Technologies).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!