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24 protocols using clone 2.4g2

1

Isolation and Staining of Adipose Cells

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Single-cell suspensions were prepared from WAT. Cells were first incubated with anti-mouse CD16/32 antibody to prevent non-specific binding (BD Biosciences, clone: 2.4G2). Then cells were stained with fluorescence-conjugated antibodies (Supplemental Experimental Methods and Materials) in FACS buffer, washed, and resuspended in FACS buffer with propidium iodide (Sigma-Aldrich P4684). Flow cytometry experiments were performed on BD LSR II (BD Biosciences) and analyzed using FlowJo software.
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2

Analyzing Immune Cell Populations in Transplanted Mice

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Blood samples (~120 μL) were withdrawn from the facial vein of C57BL/6 (WT) recipient mice 8 weeks after transplantation with GFP+ bone marrow cells (GFP+/-→WT) (n = 15) as well as of GFP+/- (n = 9) and WT (n = 6) animals. Samples were quickly collected in EDTA-coated tubes (Starstedt, Montreal, Quebec, Canada) to prevent coagulation. A volume of 35 μL of DPBS without Ca2+ and Mg2+ (Sigma-Aldrich, St Louis, MO) was added to 65 μL of blood and incubated for 20 min on ice with purified rat anti-mouse CD16/CD32 antibody diluted 1:100 (clone 2.4G2; BD Biosciences) to block non-specific binding of IgGs to Fc receptors. Samples were washed and resuspended in 100 μL of DPBS after being centrifuged at 300 x g for 10 min. Cell suspensions were then labeled with the following rat anti-mouse antibodies for 40 min at 4°C: PE-Cy5-CD45 (clone 30-F11; BD Biosciences), APC-CD115 (clone AF598; eBioscience, San Diego, CA), PE-Cy7-CD11b (clone M1/70; eBioscience), V450-Ly6C (clone AL21; BD Biosciences) and PE-Ly6G (clone 1A8; BD Pharmingen, San Jose, CA). Red blood cells were lysed with BD Pharm Lyse™ (BD Biosciences) during 30 min at room temperature, and the recovered leukocytes were washed and resuspended in DPBS for analysis. Flow cytometry analysis and data acquisition were performed using a BD SORP LSR II and the BD FACSDiva software, respectively.
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3

Phenotypic Analysis of Immune Cells

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Whole blood samples were obtained from the anaesthetized mice using a Goldenrod animal lancet (5 mm point size, Braintree Scientific Inc.). The blood sample was collected from the back of the jaw and were transferred into EDTA-coated collection tubes. For fluorescence-activated cell sorting (FACS) analysis, whole blood samples were treated with RBC lysis buffer (Sigma-Aldrich) for 10 min at rt. Then, an equal amount of PBS was added before centrifuging the samples at 300×g at rt. The resulting cell pellet was washed with PBS-1%BSA and resuspended in PBS-1%BSA containing Fc-Block (1/200; Clone 2.4G2; BD Pharmingen). The antibody was incubated at 4 °C for 30 min. Antibodies used for cell staining are as follows: anti-NK1.1-BV421 (1:200, 108741, BioLegend), anti-B220-PE/Cy7 (1:200, 103222, BioLegend), anti-CD3-FITC (1:200, 100204, Biolegend), anti-CD11b-APC (1:200, 101211, Biolegend), anti-CD11c-PE (1:200, 117307, BioLegend).
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4

Murine Splenic and Thymic T-cell Profiling

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Spleen and thymus of six-week-old NOD.Foxp3-GFP/cre (Stock No: 008694, Jackson Laboratory) were processed using frosted glass slides and passed through a 40-micron filter to create single cell suspensions. Red blood cells (RBC) were lysed with ammonium-chloride-potassium buffer prior to staining for flow cytometry. Samples were stained with Fixable Live/Dead Near IR (Invitrogen), washed once with stain buffer (PBS + 2% FBS + 0.05% NaN3), and Fc receptors were blocked with anti-CD16/32 for 5 minutes at 4°C (Clone 2.4G2, BD Biosciences). Samples were stained for 30 minutes at 4°C with the following anti-mouse antibodies: CD3e-Brilliant Violet (BV) 605 (145-2C11, BioLegend), CD4-PerCP/Cy5.5 (RM4-5, Thermo Fisher Scientific), CD8a-BV711 (53-6.7, BioLegend), CD44-PE-Cy7 (IM7, BioLegend), CD62L-APC (MEL-14, BioLegend), and CD221-PE (3B7, Santa Cruz Biotechnology). Samples were washed once with stain buffer prior to data acquisition on an LSRFortessa (BD Biosciences) and analysis with FlowJo (v10.6.1; Tree Star).
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5

Cell Cycle and Apoptosis Analysis of B16F10 Cells

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For cell cycle analysis, maltol- or cisplatin-treated B16F10 cells were fixed in ice-cold 70% ethanol overnight at 4°C. Then, the cells were incubated in PBS buffer containing RNase (100 μg/mL) and propidium iodide (PI, 50 μg/mL) for 30 min at room temperature, utilizing a PI flow cytometry kit (abcam, Cambridge, United Kingdom). For apoptosis analysis, B16F10 cells treated with maltol or cisplatin were stained with annexin V and PI using a FITC annexin V apoptosis detection kit with PI (Biolegend, San Diego, CA, United States). Cell surface PD-L1 detection was performed with reference to previous protocols (Tang et al., 2018 (link); Xu et al., 2018 (link)). Maltol or cisplatin-treated B16F10 cells were first blocked with anti-CD16/32 (anti-FcγIII/II receptor, clone 2.4G2, BD Biosciences, ≤ 1 µg/million cells), then incubated with PE-conjugated anti-mouse PD-L1 antibody (12-5982-83, eBioscience, San Diego, CA, United States, 1:200) in FACS buffer (PBS containing 0.1% BSA and 0.02% NaN3) for 30 min at 4°C. Following PBS washes, the samples were resuspended in FACS buffer and analyzed through flow cytometry.
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6

Isolation of Microglia from Mouse Brain

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Mice were perfused with PBS containing 5 IU/ml heparin. Isolated brains were stored on ice in HBSS with 45% glucose and HEPES and subsequently minced with a scalpel and dissociated in high-glucose DMEM containing collagenase A, FCS, and DNAse I (30 minutes, 37°C). Cells were centrifuged (10 min, 400g, 4˚C) and resuspended in 5 ml of 25% Percoll overlaid with 3 ml of ice-cold PBS. Microglial cells were obtained as a pellet after centrifugation (30 min, 800g, 4°C), and resuspended in FACS buffer (0.5% BSA, 2mM EDTA in PBS). Microglia were stained (30 min, on ice, in the dark) using anti-CD45-PE (1:800; clone 30-F11, eBioscience), anti-CD11b-APC-Cy7 (1:400; clone M1/70, BD Biosciences), and Fc receptor blocking antibody CD16/CD32 (1:400; clone 2.4G2, BD Biosciences). Microglia were sorted as CD45int CD11b+ cells with an Aria II (BD Biosciences) to >90% purity.
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7

Flow Cytometry Analysis of T and B Cell Activation

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B and T cells were analyzed by flow cytometry (FACS) for expression of activation and differentiation markers. Briefly, single-cell suspensions were prepared from draining lymph nodes and spleen. Cells were resuspended in PBS with 10% FCS, counted (Nucleocounter) and seeded in 96-well plates. T cells were Fc blocked (clone 2.4G2 BD) before application of surface antibodies CD4 (V450 clone RM4-5, BD), CD4 (PB clone RM4-5, BD), CD25 (APC clone 3C7, BD) or CD25 (FITC, 3C7 BD) for 20 min in room temperature (RT). B cells were stained without prior Fc blocking using v450-labeled B220 (BD Biosciences) and APC-labeled CD93 for 20 min in RT. Intracellular staining was performed using FoxP3 / Transcription Factor Staining Buffer set (eBioscience) and FoxP3 (PE clone NRRF-30 eBioscience), FoxP3 (FITC, clone FJK-16s, eBioscience) or Helios (APC Alexa Fluor 647 clone 22F6 eBioscience) for 30 min in +8C°. Isotype controls were used as negative controls. Analysis was performed by FlowJo Software (Tree Star Inc., Ashland, OR, USA) and gates for surface staining were set according to flourochrome minus one [39 (link)].
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8

Flow Cytometry Analysis of D1 Cells

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The D1 cells were grown in BM and harvested after 5 days. A homogeneous suspension of cells in PBS was prepared, washed and then incubated with anti-mouse CD16/CD32 monoclonal antibody Clone 2.4G2 (BD Biosciences, MD, USA) to block the Fc receptors. The D1 cells (1×106 cells) were stained using specific monoclonal antibodies for 30 minutes. The list of antibodies is described in Table 3. The cells were washed three times with a solution of 1% BSA in PBS and analyzed using a FACS caliber flow cytometer (BD Biosciences, MD, USA); the data was analyzed using FloJo software (TreeStar, OR, USA).
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9

Flow Cytometry: F4/80+ Cell Analysis

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Flow cytometry was conducted at the UCSF Flow Cytometry core on a BD Fortessa instrument (see Supplemental Materials and Methods). The isotype antibody control used was APC-labeled Rat IgG2a, κ (BioLegend, Clone RTK2758). Fc-receptor blocking was performed using rat anti-mouse CD16/CD32 (BD PharMingen, Clone 2.4G2). Cells were labeled with allophycocyanin (APC)-labeled rat anti-F4/80 (BioLegend, Clone BM8, Rat IgG2a, κ) according to the manufacturer’s instructions, and the data were analyzed using FlowJo software. Before analysis, dead cells and doublets were removed using forward scatter (FSC) and side scatter (SSC) gating.
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10

Characterization of Ferret Immune Cells

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Flow cytometry assays were performed as previously described [18 (link)]. Briefly, cells were blocked with Fc blocking antibody (Clone 2.4G2, Cat Nu 553142, BD Biosciences, San Jose, CA) and stained with monoclonal antibodies recognizing ferret CD4 (clone 02 –PE, Sino Biological Inc., Beijing, China), or cross-reacting with ferret CD8 (clone OKT8 –eFluor 450, eBioscience, San Diego, CA), CD11b (clone M1/70 –FITC, eBioscience), anti-MHC class II (clone CAT82A –unconjugated, Kingfisher Biotech, St. Paul, MN), CD3 (clone PC3/188A –FITC and AlexaFluor 647, Santa Cruz Biotechnology, Santa Cruz, CA), and CD79a (clone HM47 –PerCP-Cy5.5, eBioscience). The anti-MHC class II antibody was biotinylated (cat# 130-093-385, Miltenyi Biotec, San Diego, CA) prior to use and detected with streptavidin-eFluor 450 (eBioscience). Unstained cells and isotype controls (eBioscience, San Diego, CA) were included for all antibodies. Data were acquired using a FACSCanto II flow cytometer (BD Bioscience, San Jose, CA), and analyzed using FlowJo software (Tree Star, Ashland, OR).
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