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6 protocols using lipoteichoic acid lta from staphylococcus aureus

1

Epinecidin-1 Peptide Dissolution Protocol

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Epinecidin-1 (GFIFHIIKGLFHAGKMIHGLV-NH2; Epi) peptide was purchased from GL Biochem (Shanghai, China). Lipopolysaccharide (LPS) from Escherichia coli O111:B4, Lipoteichoic acid (LTA) from Staphylococcus aureus, MG132 and Heclin were purchased from Sigma. Epi was dissolved in dissolved in normal saline. LPS and LTA were dissolved in distilled water. MG132 and Heclin were dissolved in DMSO.
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2

Toll-like Receptor Agonist Controls

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The following PRR agonists were used as controls in various experiments: synthetic triacylated lipopeptide CysSerLys4 (Pam3CSK4, a TLR1/TLR2 agonist, InvivoGen); Lipopolysaccharide from Escherichia coli K12 strain (LPS-EK) and Salmonella minnesota (LPS-EM) (both ultrapure TLR4 agonists, InvivoGen); Lipoteichoic acid (LTA) from Staphylococcus aureus (TLR2/TLR6 agonist, Sigma-Aldrich); CL264 (TLR7 agonist, InvivoGen); zymosan from Saccharomyces cerevisiae (zymosan crude/ZymC, TLR2 and Dectin-1 agonist, Sigma-Aldrich); zymosan depleted from S. cerevisiae (zymosan purified/ZymP, InvivoGen); and laminarin from Laminaria digitata (Dectin-1 ligand, Sigma-Aldrich). The PRR agonists were used alone or in combination with 20 ng/mL mouse recombinant IFN-γ (Peprotech).
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3

Harmine Modulation of Immune Responses

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For RNA preparation and western blotting analysis, adherent cells (2 × 106 cells) in 6-well plates were incubated with harmine for 12 h and then stimulated with 100 ng/mL LPS (serotype 055:B5, Sigma), 50 μg/mL poly(I:C) (Sigma), 10 μg/mL lipoteichoic acid (LTA) from Staphylococcus aureus (Sigma), or 2 μM phosphorothioate-modified CpG oligonucleotide(tccatgacgttcctgacgtt)(Integrated DNA Technologies, Coralville, IA, USA) for the indicated time shown in the figure legends. In some assays, 0.5 ng/mL IFN-γ (BD Pharmingen, San Diego, CA, USA) was used for priming. For supernatant collection, adherent cells (5 × 105 cells) in 24-well plates were incubated with harmine for 12 h and then stimulated with 100 ng/mL LPS or poly(I:C) for the indicated time shown in the figure legends.
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4

Isolation and Culture of Primary Chondrocytes

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Collagenase (type II) was purchased from Worthington Biochemical Corporation (Lakewood, NJ). Dulbecco’s modified Eagle’s medium nutrient mixture F-12 (DMEM/F12; 1:1) and newborn calf serum (NCS) were purchased from Invitrogen Corporation, Japan. Penicillin, streptomycin, pantothenic acid, biotin, ascorbic acid, octanoic acid, triiodothyronine, and nicotinamide were purchased from Sigma–Aldrich (St. Louis, MO). LPS from Escherichia coli, lipoteichoic acid (LTA) from Staphylococcus aureus, and N-acetylmuramyl-l-alanyl-d-isoglutamine hydrate (MDP) were also purchased from Sigma–Aldrich. In addition, peptidoglycan (PGN) from S. aureus was purchased from Fluka Corporation (Milwaukee, WI). Glass-bottom dishes were purchased from Iwaki Co., Ltd (Tokyo, Japan).
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5

Bacterial Pathogen Protocol Optimization

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RNAiso Plus, First-Strand cDNA Synthesis Kit, in vitro Transcription T7 Kit and Taq Polymerase were purchased from TaKaRa Biotech (Dalian, China). Ultrapure LPS-EK (tlrl-peklps) were obtained from In vivoGen. Lipoteichoic acid (LTA, from Staphylococcus aureus) were obtained from Sigma (St. Louis, MO, USA). V. parahemolyticus and Vibrio harveyi identified in our laboratory as well as four standard strains Escherichia coli (8099), S. aureus (ATCC 6538), Bacillus megaterium (NBRC 15308) and Bacillus subtilis (ATCC 9372) were used in this study.
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6

Cell Culture and Reagent Sourcing

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DMEM, DMEM/F12, fetal bovine serum (FBS), penicillin, streptomycin and other cell culture reagents were purchased from Invitrogen (Carlsbad, CA, USA). LPS (from Escherichia coli, serotype 026:B6; Sigma-Aldrich, St. Louis, MO), MPTP (Sigma-Aldrich, St. Louis, MO), lipoteichoic acid (LTA, from Staphylococcus aureus, Sigma-Aldrich, St. Louis, MO), PamC3sk4 (R&D Systems) and mouse interferon-gamma (IFN-γ, Thermo Fisher Scientific) were used in this study. pcDNA3.1-licRNA-p21 and PKC delta WT (Addgene plasmid # 16386)43 (link) were kind gifts from Nadya Dimitrova and Bernard Weinstein, respectively.
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