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3 protocols using anti cd56 pe cf594

1

Imaging Flow Cytometry for Immune Cell Analysis

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For imaging flow cytometry experiments: anti-CD8 APC-Cy7 (BD Biosciences, San Jose, CA or Tonbo Biosciences, San Diego, CA) and anti-CD56 PE-CF594 (BD Biosciences) were used for surface staining; all intracellular stains included anti-perforin D48 PE or BV421 (Biolegend, San Diego, CA) and anti-perforin δG9 FITC (Biolegend) and one of the following unconjugated antibodies: anti-CD71 (Cell Signaling Technology, Danvers, MA), anti-granzyme B (BD Biosciences), anti-rab3D (Abcam, Cambridge, MA), anti-rab4 (Pierce Antibodies, Waltham, MA), anti-rab5 (Cell Signaling Technology), anti-rab7 (Santa Cruz Biotechnology, Dallas, TX), anti-rab8 (Cell Signaling Technology), anti-rab11a (Cell Signaling Technology), anti-rab27a (Abcam), anti-rab35 (Abcam), anti-rab37 (Abcam), anti-syntaxin6 (Cell Signaling Technology), anti-syntaxin7 (R&D systems, Minneapolis, MN), anti-vti1b (Abcam), anti-VAMP3 (Abcam), anti-VAMP4 (Abcam), or anti-SNAP23 (Abcam). The unconjugated antibodies were detected using goat anti-rabbit AF647, chicken anti-goat AF647, or donkey anti-sheep AF647 secondary antibodies (Invitrogen, Carlsbad, CA). For confocal microscopy, perforin D48 FITC (Abcam), perforin δG9 AF647 (Biolegend), and goat anti-rabbit or donkey anti-sheep AF568 secondary antibodies (Invitrogen) were used, along with the selected rab or SNARE antibody.
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2

Cytokine Production and Degranulation of NK Cells

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IFN-γ and TNF-α production by NK cells was evaluated in all samples available for phenotypic analysis after overnight stimulation with or without IL-12 and IL-18 (5 ng/mL) in the presence of 10 µg/mL of brefeldin A (BFA) added during the last 3 h of culture. Surface staining with anti-CD3-PE, anti-CD56-PE-CF594, and anti-CD16-FITC (BD Bioscience, Franklin Lakes, NJ, USA) was performed. Then, cells were fixed with medium A reagent and permeabilized with medium B reagent (Nordic Mubio, Lifespan Biosciences, Seattle, WA, USA) in accordance with manufacturer’s instructions. Cytokine determinations were performed by intracellular cytokine staining (ICS) with anti-IFN-γ-PerCp-Cy5.5 (BioLegend, San Diego, CA, USA) and anti-TNF-α-APC (BioLegend, San Diego, CA, USA) monoclonal antibodies and analyzed by flow cytometry. The CD107a degranulation assay was performed to assess the cytotoxic potential. Cells were stimulated overnight with IL-12 and IL-18 (as above), then incubated with K562 target cells for the last 4 h in the presence of BFA and anti-CD107a-PE-Cy7 (BD Bioscience, Franklin Lakes, NJ, USA).
Data are expressed as the difference between the percentage of cytokine or CD107a-positive+ NK cells in the stimulated and unstimulated samples.
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3

Assessment of NK Cell Cytokine Release and Cytotoxicity

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IFN-γ and TNF-α release from NK cells was assessed after IL-12 and IL-18 (5 ng/ml) overnight (O/N) stimuli in the presence or absence of specific p38 inhibitors. After 1 h of the stimulus, 10 µg/ml of BFA was supplemented for a further 3 h of culture. Anti-CD3 PE (BD), anti-CD56 PECF594 (BD), and anti-CD16 FITC (BD) were employed to stain the NK cells before fixing them with the medium A reagent and permeabilization with medium B reagent (Nordic Mubio) according to the manufacturer’s instructions. Cytokine production measurements were assessed by ICS after staining with monoclonal antibodies for IFNγ (PerCp-Cy5.5, Biolegend) and TNFα (APC, Biolegend) and subsequently run on FACS cytometry. The cytotoxic activity of NK cells was monitored through CD107a degranulation staining. Specifically, IL-12 and IL-18 were employed to stimulate the inhibitor-treated NK cells overnight (as described above). The cells together with target cells (K562) were then incubated with BFA and CD107 antibody (PECy7, BD) for the last 4 h.
The results are displayed as a ratio (fold change) of cytokine-positive NK cells detectable in inhibitor-treated vs . untreated cells. As control, the percentage of dead cells was evaluated in each inhibitor-treated sample by FACS in order to assess the cell toxicity.
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