The largest database of trusted experimental protocols

6 protocols using gapdh monoclonal antibody

1

Protein Extraction and Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein from tumor cells or bone marrow pellets was obtained from lysis in 1X RIPA buffer (#20-188, Sigma) containing 1X protease inhibitor cocktail (#P8340, Sigma), 1X phosphatase inhibitor cocktail (#524624, Sigma) and 1mM PMSF (#52332, Sigma) followed by sonication on ice and incubation at 100°C for 10 min. Total cell lysates were resolved by SDS-PAGE, and the separated proteins were transferred onto a nitrocellulose membrane. The antibodies used were as follows: GAPDH monoclonal antibody (#G8795, Sigma), β-tubulin polyclonal antibody (#ab6046, Abcam, Waltham, MA), p38α polyclonal antibody (#9218, Cell Signaling Technology, Danvers, MA), arginase-1 monoclonal antibody (#93668, Cell Signaling Technology), phospho-MK2 polyclonal antibody (#3041, Cell Signaling Technology), MK2 polyclonal antibody (#3042, Cell Signaling Technology) and Ovalbumin polyclonal antibody (#PA1-196, ThermoFisher Scientific, Waltham, MA). Immunodetection was performed with Pierce ECL Western Blotting Substrate (#32106, ThermoFisher Scientific, Waltham, MA).
+ Open protocol
+ Expand
2

Ritonavir and GLUT Protein Analyses

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ritonavir (Norvir) was obtained from Abbott pharmaceuticals (Abbott Park, IL). Ritonavir, in pure drug form and used for in vitro studies was provided by the NIH AIDS Reagent Program. GLUT1 and GLUT12 polyclonal antibodies were kind gifts from Mike Mueckler and Kelle Moley, respectively (Washington University, St. Louis, MO). GLUT4 antibody was custom produced by Invitrogen using a peptide corresponding to the 16 carboxyl-terminal residues of GLUT4. Human GLUT12 plasmid was obtained from the DNASU Plasmid Repository (Tempe, AZ). GAPDH monoclonal antibody was purchased from Sigma (St. Louis, MO). Secondary anti-mouse and anti-rabbit antibodies were from LI-COR (Lincoln, NE). Unless noted, all other reagents were purchased from Sigma (St. Louis, MO).
+ Open protocol
+ Expand
3

Evaluating Protein Expression via Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein expression was evaluated by western blotting as previously described [13 (link)]. Expression of Myc-tagged human ABCB5 and murine Abcb5 was evaluated using mouse anti-c-Myc monoclonal antibody 9E10 (Roche Diagnostics, Indianapolis, IN, USA). Mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) monoclonal antibody (Chemicon, Temecula, CA, USA) was used as a protein loading control. The blots were incubated with peroxidase-conjugated secondary antibodies (GE Healthcare, Little Chalfont, UK). The membrane-bound antibodies were visualized using the SuperSignal West Dura Extended Duration Substrate (Thermo Fisher Scientific, Waltham, MA, USA).
+ Open protocol
+ Expand
4

Western Blot Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed with twice pre-cold PBS and lysed in RIPA Lysis Buffer (Millipore, Bedford, MA, USA). Protein concentrations were quantified by the Bio-Rad protein assay kit (Bio-Rad, Hercules, CA, USA). Protein lysates were resolved on a 10% SDS-polyacrylamide gel and electroblotted onto Immobilon-P PVDF membranes (Millipore). The membranes were blocked in TTBS containing 5% nonfat milk and incubated with diluted primary antibodies overnight at 4 °C. The membranes were then reacted with species-specific HRP-conjugated secondary antibodies (1:5000–10000 in TTBS), and the immunoreactive protein bands were detected by Amersham ECL™ Prime Western Blotting Detection Reagent (GE Healthcare, Chicago, IL, USA). The primary antibodies used included Brachyury monoclonal antibody (1:1000; Millipore), GAPDH monoclonal antibody (1:30000; Chemicon, Temecula, CA, USA), GFAP monoclonal antibody (1:2000; Millipore), NANOG polyclonal antibody (1:2000; Abcam, Cambridge, UK), NeuroD1 polyclonal antibody (1:2500; Millipore), OCT4 monoclonal antibody (1:2000; Cell Signaling Technology, Beverly, MA, USA), Pax6 monoclonal antibody (1:2000; Abnova, Taipei, Taiwan), and SOX2 polyclonal antibody (1:2000; Chemicon).
+ Open protocol
+ Expand
5

Cell Culture and Transfection Procedures

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fibroblasts NR6WT were cultured in alpha-MEM media supplemented with 1x sodium pyruvate, 1x non-essential amino acids, 1x pen/strep antibiotics, 1x L-glutamine, and 7.5% fetal bovine serum. Melanoma cell line WM1158 was cultured in DMEM (1 gL−1 glucose): L15 3:1 medium supplemented with 10% fetal bovine serum and 1x pen/strip antibiotics. Transfection reagent xFect was purchased from Clonetech Life Technologies (Grand Island, NY). Monoclonal phospho-tyrosine antibody (p-Tyr-100) was purchased from Cell Signaling Technology (Beverly, MA). GFP-Trap A beads used for immunoprecipitation of GFP-tagged protein were purchased from ChromoTek GmbH Planegg-Martinsried, Germany). Polyclonal GFP was purchased from Santa Cruz (Dallas, TA). Monoclonal GAPDH antibody was purchased from Sigma Aldrich (St. Louis, MO). Accuprime DNA polymerase supermix was purchased from Invitrogen (Life Technologies, Grand Island, NY).
+ Open protocol
+ Expand
6

Western Blot Analysis of Total Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein from MCF-7, MDA-MB-231, MDA-MB-468, SKBR-3 and SUM159 cell lysates were extracted by resuspending the cell pellets in RIPA buffer (150 mM NaCl, 50 mM Tris (pH 7.4) and 1% Triton X-100). The protein concentration was measured using a BCA Protein Assay Kit (Cat# 23227, Thermo, USA). Approximately 30 μg of total protein per sample was separated by SDS-PAGE and then transferred onto nitrocellulose membranes. Western blot analyses were performed with polyclonal antibodies against GPD1 (Cat# sc-376219, Santa Cruz Biotechnology, USA), with a monoclonal GAPDH antibody as a control (Cat# G9545, Sigma, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!