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3 protocols using rabbit polyclonal anti lc3b antibody

1

Comprehensive Cellular Assay Protocol

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Bicinchoninic acid (BCA) protein assay kit (P0009), LDH cytotoxicity assay kit (C0016), enhanced chemiluminescence (ECL) kit (P0018M), MTT cell proliferation and cytotoxicity assay kit (C0009), Hoechst staining kit (C0003), benzyloxycarbonyl-Val-Ala-Asp fluoromethylketone (Z-VAD) (C1202), were obtained from Beyotime Institute of Biotechnology (Haimen, Jiangsu, China). Glutathione (GSH) assay kit was obtained from Nanjing Jiancheng Bioengineering Institute (Jiancheng, Nanjing, Jiangsu, China). Hydrogen peroxide (H2O2) and 3-methyladenine (3-MA) were obtained from Sigma-Aldrich (St. Louis, USA). Rabbit monoclonal anti-caspase-3 (cleaved) antibody was obtained from Beyotime Institute of Biotechnology. Rabbit polyclonal anti-LC3B antibody and horseradish peroxidase (HRP)-conjugated goat anti-rabbit or -mouse secondary antibodies were purchased from Sigma-Aldrich. Mouse monoclonal anti-β-actin antibody and rabbit polyclonal anti-ATG5 antibody were purchased from Santa Cruz Biotechnology (Santa Cruz, USA). X-tremeGENE siRNA transfection regent was from Roche (Basel, Switzerland).
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2

Autophagy Regulation in ALS Model Cells

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NSC34 cells were plated in 12-well multiwell plates containing coverslips at 70 000 cells/well density, transiently transfected with the plasmid coding for GFP-ARQ48 as previously described and treated with 100 mm trehalose and/or 100 nm Bicalutamide and/or 10 nm testosterone for 48 h. The cells were then fixed and processed as previously described (Sau, 2007). To analyze LC3 and SQSTM1/p62 protein expressions, we used the following primary antibodies: rabbit polyclonal anti-LC3-B antibody 1 : 1000 (Sigma-Aldrich) in 5% nonfat milk, rabbit polyclonal anti-SQSTM1/p62 antibody 1 : 1000 (Abcam, Cambridge, UK) in 5% nonfat milk. Secondary antibodies used were: Alexa 488 anti-rabbit and Alexa 594 anti-rabbit (Life Technologies) 1 : 1000 in milk. Cells were stained with DAPI to visualize the nuclei. An Axiovert 200 microscope (Zeiss Instr., Oberkochen, Germany) equipped with FITC/TRITC/DAPI and combined with a Photometric Cool-Snap CCD camera (Ropper Scientific, Trenton, NJ, USA) was used. Images were processed using the Metamorph software (Universal Imaging, Downingtown, PA, USA).
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3

Antibodies for ER Stress Pathway Analysis

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Thapsigargin (Tg), mouse monoclonal anti-Flag M2 antibody, rabbit polyclonal anti-LC3B antibody, rabbit polyclonal anti-p62/SQSTM1 antibody, and mouse monoclonal anti-actin antibody were purchased from Sigma-Aldrich. Mouse monoclonal antibodies against GRP78, GRP94, ATF6, ATF4, Beclin-1, PERK, phospho-PERK, eIF2α, and phospho-eIF2α were purchased from Cell Signaling Technology (Danvers, MA, USA). Rabbit polyclonal IRE 1 and phospho-IRE 1 were purchased from Abcam (Cambridge, MA, USA). Horseradish peroxidase (HRP)-conjugated goat anti-rabbit or -mouse secondary antibody was purchased from Jackson ImmunoResearch (West Grove, PA, USA). Alexa Fluor 594-labeled donkey anti-goat IgG was purchased from Life Technologies (Carlsbad, CA, USA). 4′,6′-diamidino-2-phenylindole (DAPI) and Cy3-labeled goat anti-mouse IgG were purchased from Thermo Scientific (Waltham, MA, USA).
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