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12 protocols using hsp60

1

Immunolocalization of Heat Shock Proteins

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Immunolocalization of HSP 90, 70, 60 and 27 was performed in all hemocyte cultures (controls, F24 and F48). The cells were fixed in 4% Paraformaldehyde (Sigma-Aldrich; PFA) in Phosphate-buffered saline (PBS) and permeabilized in 0.1% Triton X-100 (Sigma-Aldrich) in PBS. The cells were incubated overnight at 4°C with primary antibodies all from Enzo Life Sciences: HSP90α/β monoclonal antibody, HSP70 monoclonal antibody, HSP60 (insect) polyclonal antibody or HSP27 polyclonal antibody. Antibodies were diluted 1:40 in PBS with 1% bovine serum albumin (BSA, Sigma-Aldrich). The cells were then incubated in 4% BSA-PBS for two hours to prevent non-specific antibody binding. Following this, the hemocytes were incubated for a further two hours at room temperature with secondary antibody DyLight 488, Goat Anti-Mouse IgG (Abbkine) for HSP 90 and 70 or Dylight 594, Goat Anti-Rabbit IgG (Abbkine) for HSP 60 and 27. Concentrations of secondary antibodies were 2μg/ml. ActinGreen 488 ReadyProbes Reagent (Invitrogen) or ActinRed 555 ReadyProbes Reagent (Invitrogen) were used to label the actin fibers. The cell nuclei were stained with Hoechst (Enzo Life Sciences). Fluorescence signals were analyzed by fluorescent microscopy an Axio Vert.A1 fluorescence microscope (Zeiss) with Axio Cam ICc 5 (Zeiss).
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2

Intrathecal Injection and CSF Analysis in Mice

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Intrathecal injection into mice and analysis of the CSF were performed as described previously [7 (link),16 (link),19 (link)]. In detail, 40 μL of ligand solution (PCR studies after 12 h: 10 μg LPS, 10 μg Pam3CysSK4, 10 μg imiquimod, 10 μg CpG ODN; histologic studies after 72 h: 10 μg LPS, 40 μg Pam3CysSK4, 136 μg loxoribine, 10 μg CpG ODN, all obtained from Invivogen, or 10 μg HSP60 (Enzo Life Sciences) were injected intrathecally into 6- to 8-week-old male mice. Notably, the contamination with LPS of the HSP60 preparation as declared by the manufacturer was <50 EU/mg and ≤1.67 EU/mg, as determined by an independent laboratory specializing in endotoxin testing and published in previous work (Mikrobiologisches Labor, Münster, Germany; see also [18 (link)]). For real-time PCR analysis, brains were removed and cut along the sulcus medianus into two halves, which were separately snap-frozen in liquid nitrogen. For immunohistochemical studies, mice were perfused transcardially with isotonic-saline followed by 4% paraformaldehyde (PFA). Brains were removed, subjected to a row of 10%, 20%, and finally 30% sucrose in 0.1 M phosphate buffered saline (PBS) for cryoprotection, frozen in 2-methylbutan on dry ice, and stored at –80°C until sectioning.
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3

Mitochondrial Protein Analysis Using Antibodies

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The following monoclonal and polyclonal antibodies were used for Western blotting: OTC (Santa Cruz Biotechnology, Inc. or Abcam), Hsp90 (Santa Cruz Biotechnology, Inc.), Hsp60 (Enzo Life Sciences), ATG5 (Cell Signaling Technology), TOM20 (Santa Cruz Biotechnology, Inc.), Parkin (Santa Cruz Biotechnology, Inc.), PINK1 (Cell Signaling Technology), GFP (Thermo Fisher Scientific), syntaxin 17 (Novus Biologicals), and SNAP (New England Biolabs, Inc.). For immunostaining: OTC (Novus Biologicals), ubiquitin (Cell Signaling Technology), TOM20 (Santa Cruz Biotechnology, Inc.), pyruvate dehydrogenase (PDH; Abcam), p62 (Cedarlane), and PINK1 (Cell Signaling Technology) were used. Mito-RFP or mito-GFP Cell Light Virus (Thermo Fisher Scientific), 20 nM MitoTracker (Thermo Fisher Scientific), or 20 nM TMRM (Enzo Life Sciences) or 600 nM SNAP ligand–tetramethylrhodamine were used to label mitochondria according to manufacturer’s protocols.
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4

Microglial and Neuronal Responses to TLR Ligands

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Lipopolysaccharide (LPS), Pam3CysSK4, loxoribine, imiquimod, and CpG ODN were obtained from Invivogen, San Diego, USA. HSP60 was obtained as low-endotoxin charge from Enzo Life Sciences, Lörrach, Germany. Dose response studies with the different ligands were performed in microglial and neuronal cultures analyzed by TNF-α ELISA (Additional file 1: Figure S1A) and by quantification of NeuN+ cells per field (Additional file 1: Figure S1B), respectively. The concentrations of the respective ligands that induce maximum responses were in part published in previous work [7 (link),18 (link),19 (link)] and were used in this study.
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5

Western Blot Analysis of Mitochondrial Proteins

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Commercially available antibodies were used in western blots (WBs), for the detection of OPA1 and TIM44 (BD Transduction Laboratories, Franklin Lakes, New Jersey, USA), OMA1 (Novus Biologicals, Littleton, Colorado, USA), tubulin (DSHB, University of Colorado, Colorado, USA), HSP60 (Enzo Life Science, Farmingdale, New York, USA), MTCO1 and VDAC1 (Abcam, Cambridge, UK). Anti-AFG3L2 N-terminal (OriGene, Rockville, Maryland, USA) and an anti-AFG3L2 C-terminal antibody (previously generated in the lab)7 (link) were used to detect AFG3L2. Secondary antibodies used included Horseradish Peroxidase (HRP)-conjugated antimouse and antirabbit IgG (Amersham Bioscience, Buckinghamshire, UK). Chloramphenicol succinate sodium salt (Merck, KGaA, Billerica, Massachusetts, USA) was used at a concentration of 200 µg/mL for 24 hours. Carbonyl cyanide-4 -(trifluoromethoxy)phenylhydrazone (FCCP) (Merck) was used at a concentration of 10 µM for 10 min.
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6

Production and Purification of Recombinant Proteins

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Human recombinant BiP, HSP60, HSP40, and Cpn10 and recombinant MycHSP65 and MycHSP70 were purchased from Enzo Life Sciences. E. coli recombinant DNAK, GroES, DNAJ, and GroEL were purchased from ProSpec-Tany TechnoGene. The recombinant MycHSP70 protein (NCBI GenBank AF2122/97) was produced for the mouse immunization study using the pET Directional TOPO Expression Kit (Life Technologies) and purified by the Ni-NTA Fast Start Kit (QIAGEN) according to the manufacturer’s procedures. The preparation of citrullinated BiP was described previously7 (link). Endotoxin was removed by passing through a Detoxi-Gel AffinityPak prepared column (Pierce).
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7

Mitochondrial Proteome Analysis in Frozen Tissue

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Frozen cortex tissue samples were lysed by mechanical homogenization with RIPA buffer containing protease and phosphatase inhibitors, and analyzed by SDS–PAGE and western blot. Subsequently, the concentration of extracted protein was determined by using the Bio-Rad Protein Assay. Proteins were detected using the following antibodies: HSP60 (Enzo Life Science), CLPP (Sigma), anti-GAPDH (14C10) (Cell Signaling), LONP1 (Sigma), PINK1 (Novus Biologicals), LC3 A/B (Cell Signaling), SDHB (Oxphos cocktail, Abcam), MTCO1 (Abcam), Ubiquitin (Enzo), P62 (BD Transduction Laboratories), Phopsho P62 (Cell Signaling), VDAC (Abcam). In addition to the housekeeping proteins, loading was monitored by Ponceau Red to ensure a homogeneous loading. Antibody detection reactions for all the immunoblot experiments were developed by enhanced chemiluminescence (Advansta) and imaged using the c300 imaging system (Azure Biosystems). Pixel intensity was quantified by using ImageJ software.
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8

Western Blot Analysis of Protein Samples

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Selected protein samples were run on a 10% SDS-PAGE, with 6% stacking gel, for 1 h at 180 V. The gels were then transferred to nitrocellulose membranes using the Mini-Protean apparatus (Bio-Rad) in 1X transfer buffer (25 mM Tris base, 0.2 M glycine, 20% methanol). Membranes were blocked overnight at 4 °C in blocking solution (5% (w/v) dried milk in PBS-tween). Primary antibodies were incubated at a 1:1,000 dilution, unless otherwise stated. The following primary antibodies were used at a 1:1,000 dilution: α-His antibody (Roche), α-Mga4, α-Mga1-HRP, and α-Sda1 (kindly provided by M. Walker). Blots were then washed three times for 5 min in PBS-tween. The primary antibody Hsp60 (Enzo Life Sciences) was used at a 1:2,500 dilution. Blots were then incubated with secondary antibodies: α-rabbit-HRP (1:5,000) or α-mouse-HRP (1:20,000) for 1 h. The blots were then washed with PBS-tween three times for 5 min, and visualized using SuperSignal West Femto Substrate (Thermo Scientific) and a LAS-3000 CCD camera (FUJIFILM).
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9

Flow Cytometry Analysis of HSP60-Stimulated PBMCs

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Isolated PBMCs were plated at a density of 1.0×106/well and cultured in the absence or presence of HSP60 (2.5 ng/ml, Enzo Life Sciences Inc., Farmingdale, NY) for 2 days. Cells were cultured and harvested for flow cytometry for a direct culture assay as described by Kepitein and de Kleer [22 (link),23 (link)], in which the peripheral blood monocytes were isolated and cultured with or without the stimulation of HSP60, and at different time points of culture, monocytes were collected for flow cytometry analysis.
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10

Mitochondrial Proteome Analysis in Frozen Tissue

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Frozen cortex tissue samples were lysed by mechanical homogenization with RIPA buffer containing protease and phosphatase inhibitors, and analyzed by SDS–PAGE and western blot. Subsequently, the concentration of extracted protein was determined by using the Bio-Rad Protein Assay. Proteins were detected using the following antibodies: HSP60 (Enzo Life Science), CLPP (Sigma), anti-GAPDH (14C10) (Cell Signaling), LONP1 (Sigma), PINK1 (Novus Biologicals), LC3 A/B (Cell Signaling), SDHB (Oxphos cocktail, Abcam), MTCO1 (Abcam), Ubiquitin (Enzo), P62 (BD Transduction Laboratories), Phopsho P62 (Cell Signaling), VDAC (Abcam). In addition to the housekeeping proteins, loading was monitored by Ponceau Red to ensure a homogeneous loading. Antibody detection reactions for all the immunoblot experiments were developed by enhanced chemiluminescence (Advansta) and imaged using the c300 imaging system (Azure Biosystems). Pixel intensity was quantified by using ImageJ software.
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