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7 protocols using ab238697

1

Western Blot Analysis of PD-L1 Protein

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Total kidney lysates were homogenized in NP40 lysis buffer (Invitrogen, Carlsbad, USA) supplemented with protease cocktail inhibitor (Roche, Basel, Switzerland). After sonication, proteins were resolved by Tris-acetate-SDS acrylamide gel electrophoresis and transferred onto PVDF membranes (Invitrogen, Carlsbad, USA) and blocked in 5% dry milk in TBS-T (TBS pH 7.6, 0.1% Tween-20). After incubation with respective primary antibodies against PD-L1 (ab238697, Abcam, Cambridge, UK) and β-actin (ab8227, Abcam, Cambridge, UK) were used following incubation with secondary HRP-conjugated antibodies (Dako, Glostrup, Denmark). Luminescence was detected on an X-ray film using chemiluminescent substrate (Cell Signaling, Danvers, USA). Individual lanes represent biological replicates and densitometry was performed using ImageJ software (National Institute of Health, Bethesda, USA), PD-L1 band density was quantified relative to β-actin.
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2

Immunostaining for PD-L1 and PFKFB3

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For the IHC assays, staining and analysis were performed according to the manufacturer’s instructions. Respective antibodies used in this study are listed in supplementary table 2. For quantification analysis, we evaluated the extent and intensity of all markers. Immunofluorescence staining was performed according to the manufacturer’s instructions, and an anti-PD-L1 antibody (1:200, Abcam, ab238697) and anti-PFKFB3 antibody (1:150, Abcam, ab181861) was used in this study.
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3

PD-L1 Expression in Tumor Xenografts

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U87MG, A549,
GL261, and GL261-iPDL1 tumor-bearing mice were sacrificed after Al[18F]F-NOTA-PCP1 PET/CT imaging, and tumors were immediately
removed and placed in 4% neutral buffered formalin for 48 h. Subsequently,
tumors were dehydrated, embedded in paraffin, and then sections were
baked for 60 min at 65 °C before dewaxing and hydration. Subsequently,
antigens were repaired via antigen repair buffer (K8004 EnVisionTM
FLEX Target Retrieval Solution, High PHX50) for 50 min. The sections
were incubated with antihuman PD-L1 antibody (M3653, Dako, Agilent,
USA) or antimouse PD-L1 antibody (ab238697, Abcam, UK). Afterward,
the samples were incubated with FLEX/HRP (Agilent, SM802) for 20 min
and then with Flex (SM803) DAB+Sub chromo (diaminobenzidine-peroxidase
substrate, Dako) for 10 min. Finally, the sections were scanned via
a ZEISS Automatic Digital Slide Scanner (Axio Scan. Z1, German), and
ZEN 2012 software (blue edition) was utilized to analyze the data.
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4

Histopathological Evaluation of Cervical Samples

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During the colposcopy, cervical samples were taken from the areas that were evaluated as abnormal with punch biopsy forceps. All cervical specimens were fixed with formalin and embedded in paraffin. Sections that were 4-μm thick were cut and stained with hematoxylin and eosin. For the histological examination, we evaluated the presence of cell dysplasia, cell irregularity, cell hyperchromatism, and increased nuclear-cytoplasmic ratio, loss of cell polarization, mitotic figure, koilocytosis, and infiltration of the immune cells.
All tissue preparation and immunohistochemistry (IHC) procedures were performed as previously described [17 (link)]. IHC analysis was performed using the Super Vision Assay Kit (SV0002–1, Boster Bio, Pleasanton, CA, USA) by two experienced histopathologists. The primary antibodies used in this study were an anti-human Ki-67 antibody against proliferating cells, dilution 1:100 (Anti-human Ki-67 Antigen Antibody, Dako, Carpinteria, CA, USA), an anti-mouse p16 (p16INK4a) monoclonal antibody, dilution 1:50 (Roche E6H4™, catalog #725–4713, Roche, Basel, Switzerland), and an anti-mouse Anti-PD-L1 antibody, dilution 1:100 [PDL1/2746] (ab238697, Abcam, Cambridge, MA, USA). During the evaluation, analyzed fields were randomly selected from ten slides using a light microscope (Nikon Eclipse Ni-U, Tokyo, Japan).
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5

Immunoblotting Analysis of Cell Signaling

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Cells were collected and lysed in RIPA buffer containing protease inhibitor cocktail. After quantification, 20 μg of total proteins were used to perform an SDS-PAGE and WB analysis. PVDF membranes were incubated overnight with the primary antibodies anti-PD-L1 (ab238697, Abcam), phospho-CREB (ab32096, Abcam), CREB (ab32515, Abcam), p-PKAα/β/γ (sc-32968, Santa Cruz Biotechnology), β-actin (sc-1615, Santa Cruz Biotechnology), β3-AR (ab94506, Abcam) at 4 °C and then with specific secondary antibodies for 1 h at room temperature. Binding of the antibodies with the specific proteins has been detected by using Clarity Western ECL Substrate (Bio-Rad) and images were acquired through the Chemidoc Imaging System (Biorad®). IMAGEJ software was used to perform quantitative analyses, and the signal intensity of the bands was expressed as fold-increase relative to control values.
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6

Immunofluorescence Analysis of Murine Tumor

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Immunofluorescence analysis of murine tumor mass was performed as follows. Samples were rapidly excised, fixed in buffered 4% formaldehyde for 24 h and paraffin-embedded. Histological sections, 5 μm thick, were cut from samples, were deparaffinized and boiled for 10 min in sodium citrate buffer (10 mM, pH 6.0; Bio-Optica) for antigen retrieval and immunostained over night at 4 °C with primary antibodies (anti-PD-L1, ab238697, Abcam; anti-β3-AR, ab94506, Abcam; anti-CD4, 14-9766-82, eBioscience; anti-CD8, 14-0808-82, eBioscience; DBH, ab209487, Abcam). Immune reaction was revealed incubating sections with secondary antibodies Alexa Fluor 488-conjugated IgG or Alexa Fluor 594-conjugated IgG (1:350; Jackson Laboratory). After counterstaining with 4,6-diamidino-2-phenylindole (DAPI), representative images were acquired by an Olympus BX63 microscope coupled to CellSens Dimension Imaging Software version 1.6 (Olympus). The immunofluorescence staining was evaluated through the ImageJ software (NIH, USA) as the fluorescence intensity of protein of interest was normalized to DAPI values.
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7

PD-L1 Immunohistochemistry on FFPE Samples

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Formalin-fixed tumours were embedded in paraffin, sectioned at 4 μm and mounted on SuperFrost ULTRA PLUS slides (Thermo Fisher Scientific). Sections were deparaffinized, rehydrated in a series of alcohols, and microwaved in citrate buffer pH = 6 for heat-induced epitope retrieval. Sections were blocked and stained with the following antibodies: anti-human PD-L1 antibody (#ab205921, Abcam) or anti-mouse PD-L1 (#ab238697, Abcam). Primary antibodies were detected using the EnVision + System-HRP labelled Polymer and Liquid DAB + substrate chromogen system (Agilent Technologies). All procedures were performed at room temperature and all tumours were stained in the same batch.
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