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3 protocols using goat anti sox1

1

Immunohistochemical Staining of Mouse Tissue

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Immunohistochemistry of coronal cryosections was performed as previously described (Burnett et al., 2017 (link)). Primary antibodies were used at the following concentrations: rabbit anti-PAX2 (1:450, Covance Research Products), mouse anti-PAX6 (1:50, Developmental Studies Hybridoma Bank), sheep anti-CHX10 (1:600, Exalpha Biologicals), mouse anti-MITF (1:1500, Abcam), rabbit anti-OTX2 (1:600, Upstate Biotechnology), mouse anti-COUPTFII (1:300, R & D Systems), goat anti-SOX1 (1:100, R & D Systems), rabbit anti-SOX2 (1:300, EMD Millipore), mouse anti-γ-TUBULIN (1:1000, Sigma-Aldrich), rabbit anti-ARL13B (1:3000, T. Caspary, Emory University). Images were taken with either a Zeiss Axioplan 2 or a Keyence BZ-×710 fluorescence microscope. High-magnification images of cilia are maximum intensity projections from z-stacks taken on a Zeiss LSM510 confocal microscope.
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2

Embryonic Protein Expression Analysis

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Immunofluorescence was performed on frozen tissue sections of E8.5
embryos after prior methods (Wang and Matise,
2013
). Antibodies used were: goat anti-Brachyury (AF2085; R&D
Systems), goat anti-FOXA2 (M-20, sc-6554; Santa Cruz), goat anti-SOX1 (AF3369;
R&D Systems), rabbit anti-Ki67 (90584; Thermo), rabbit anti-phospho-Histone
H3 (06–570; Millipore), and rabbit anti-cleaved Caspase 3 (9661; Cell
Signaling). Immunofluorescence imaging was performed on a Zeiss Axio Imager
Z1.
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3

Multiplex Immunocytochemistry for Neural Lineage

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After the 14 d assay treatment of cells, they were fixed with 1% paraformaldehyde (Wako) for 30 min at room temperature. After fixation, they were washed with phosphate-buffered saline (PBS; Wako) and permeabilized with 0.2% Triton X-100 (MP Biomedicals, Santa Ana, CA)/1× Blocking One (Nacalai tesque, Kyoto, Japan)/PBS (PBS-B-T buffer) for 30 min at room temperature. Then, cells were incubated with primary antibodies (goat anti-SOX1 [as a neural progenitor marker, 1:1000; R&D Systems, Minneapolis, MN], rat anti-GFAP [as an astrocyte marker, 1:1000; Life Technologies], and mouse anti-MAP2 [as a neuron marker, 1:1000; Sigma-Aldrich]) in PBS-B-T buffer overnight at 4 °C. After washing with 0.1% Tween-20 (Wako)/PBS, cells were treated with secondary antibodies (anti-goat IgG [H+L] Alexa Fluor 488 [1:500; Life Technologies], anti-rat IgG [H+L] Alexa Fluor 594 [1:500; Life Technologies], and anti-mouse IgG [H+L] Alexa Fluor 647 [1:500; Life Technologies]) and Hoechst-33342 (5 µg/ mL; Sigma-Aldrich) in PBS-B-T buffer for 60 min at room temperature.
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