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Dodecyl maltoside ddm

Manufactured by Merck Group

Dodecyl Maltoside-DDM is a non-ionic detergent commonly used in biochemical applications. It is a mild detergent that can be used to solubilize and stabilize membrane proteins. Dodecyl Maltoside-DDM is effective in extracting and maintaining the native structure and function of membrane proteins.

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2 protocols using dodecyl maltoside ddm

1

Optimizing MBP-ELIC Expression and Purification

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MBP-ELIC expression levels were tested in four different growth media types: Luria Broth (LB), Terrific Broth (TB), and ZYM-5052 and ZYM-512 auto-induction media, as well as the 5 E. coli strains listed above. LB was purchased from Difco. TB was made in-house and consisted of 1.2% tryptone, 2.4% yeast extract, 0.4% glycerol, 17 mM KH2PO4, and 72 mM K2HPO4. The ZYM-5052 auto-induction medium was made as previously described [24 (link)]. ZYM-512 media was made using the same protocol, with the exception of an increase to 0.1% glucose from 0.05% glucose. The components used to make the media are as follows: tryptone, yeast extract, MgSO4, 0.2× trace metals, Na2HPO4, Na2SO4, KH2PO4, NH4Cl), glucose, lactose, and glycerol.
Extraction tests of MBP-ELIC fusion were performed with the following detergents, which were purchased from Anatrace unless otherwise noted: 1% SDS, 1% Sarcosine, 20 mM Dodecyl Maltoside-DDM, 40 mM Decyl Maltoside-DM, 1.5% Anzergent 3–10, 1.5% Anzergent 3–12, 1.5% Thesit (Sigma), 1.5% Triton X-100, 1.5% Anapoe C12E10, 1.5% Anapoe C10E9. From this pool, Sarcosine, DDM, Anzergent 3–12, and Triton X-100 were chosen due to the large quantities of protein extracted during the solubilization test. The hydrodynamic properties of the purified ELIC were assessed by Size Exclusion Chromatography (SEC) on a BioRad EnRich SEC 650 10×300 column.
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2

Blue Native PAGE for Mitochondrial Complexes

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Blue native polyacrylamide gel electrophoresis (BN-PAGE) was conducted as mentioned before [27 (link)]. For mitochondrial supercomplexes, 1% digitonin (Sigma-Aldrich) was used to dissolve the membrane protein from patient and controls, then 3.5–16% gradients polyacrylamide gel to separate the supercomplexes. For mitochondrial complexes, 1% dodecyl maltoside (DDM, Sigma-Aldrich) was used and then 3–11% gradient polyacrylamide gel to separate the complexes. The proteins were transferred on the PVDF membrane (Bio-Rad, USA), blocked with 5% no-fatty acid milk (Mengniu, China), incubated with the first and second antibodies, and then detected the protein signals using. The following antibodies were used: anti-Grim19 (1:1000, Sigma-Aldrich), anti-SDHA (1:3000, Sigma-Aldrich), anti-UQCRC2 (1:2000, Sigma-Aldrich), anti-MT-COI (1:2000, Sigma-Aldrich), anti-ATP5A (1:3000, Sigma-Aldrich), anti-NDUFB6 (1:2000, Sigma-Aldrich), anti-NDUFS3 (1:2000, Sigma-Aldrich), anti-TOM70 (1:2000, Proteintech, China), anti-mouse IgG HRP linked (1:2000, Cell Signaling Technology), anti-rabbit IgG HRP linked (1:2000, Cell Signaling Technology), anti-mouse IgG, AP (1:2000, Cell Signaling Technology).
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