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The C57BL/6 is a widely used inbred mouse strain that serves as a common model organism for biomedical research. It is genetically homogeneous, allowing for consistent and reproducible experimental results. The C57BL/6 strain exhibits characteristics that make it suitable for a variety of research applications.

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788 protocols using c57bl 6

1

Generation and Characterization of Ccr2-RFP Mice

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All mice used in the current study were housed in the same rooms in Emory’s animal facility during the course of the experiment, with one room designated for animal breeding and maintenance and an adjacent room solely for SE experiments. The lights were on a 12-h on/off cycle, and mice were fed and watered ab libitum. In Ccr2rfp/rfp KO mice, the Ccr2 open reading frame was disrupted with a cDNA encoding red fluorescent protein (RFP)20 (link). The Ccr2rfp/rfp mice originally obtained were maintained on the C57BL/6 (Jackson Laboratories) inbred genetic background, and we subsequently backcrossed the mice to C57BL/6 (Charles River) for over 11 generations. To generate heterozygous Ccr2+/rfp mice, in which Ccr2-expressing monocytes are marked by RFP expression, male Ccr2rfp/rfp mice were bred to female C57BL/6 mice from Charles River.
After backcrossing for over 11 generations we submitted genetic material obtained from a Ccr2rfp/rfp mouse to Charles River Laboratories for strain background characterization. A total of 128 single nucleotide polymorphisms (SNPs) spread across the genome was analyzed to generate an allelic profile for comparison between the Jackson Laboratories and Charles River C57BL/6 substrains. Our Ccr2rfp/rfp mice were a 99.6% match to C57BL/6 inbred mice from Charles River Laboratories, making the mouse strain essentially congenic.
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2

Quantifying GAS Dissemination in Mice

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6–8 week old C57BL/6 (Charles River, Margate, UK), and age and weight-matched C57BL/6 C5-/- and C57BL/6 C3-/-/C5-/- female mice were challenged intra-muscularly with 1×108 GAS, and quantitative endpoints compared at 3 hours post infection. Mice were euthanized, blood taken by cardiac puncture and infected thigh muscle, spleen, liver, and draining inguinal lymph nodes dissected. All organs were plated to quantify bacterial cfu and systemic dissemination. Additional C57BL/6 mice were challenged intra-muscularly with 1×108 GAS. Whole thighs were formalin-fixed, and paraffin-embedded for histopathology imaging as described previously [24 (link)], or homogenized and prepared for western blotting as described above. No animals were excluded from the study and randomization was not necessary as mice were genetically identical and age, weight and sex matched. No blinding was carried out as mice were caged separately to prevent contamination with different GAS strains.
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3

Transgenic Mice for Tumor Studies

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For tumor experiments, Wild type (C57BL/6, Charles River), CD30KO OX40KO (dKO, C57BL/6), CD30KO OX40KO FoxP3KO (tKO, C57BL/6), female mice (6-8 weeks old) were bred and maintained in the animal facilities, Biomedical Services Unit (University of Birmingham, UK). The dKO and tKO mice were generated as described previously (22 (link)–23 (link)). In experiments where mAbs were injected, female C57BL/6 were used for experiments.
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4

Tumor Experiments with Knockout Mice

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For tumor experiments, wild-type (C57BL/6, Charles River Laboratories), CD30KO OX40KO (double knockout [dKO], C57BL/6), and CD30KO OX40KO Foxp3KO (triple knockout [tKO], C57BL/6) female mice (6–8 wk old) were bred and maintained in the animal facilities at the Biomedical Services Unit (University of Birmingham, U.K.). The dKO and tKO mice were generated as described previously (22 (link), 23 (link)). In experiments where mAbs were injected, female C57BL/6 mice were used for experiments.
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5

Evaluation of Ox-LDL-M-EVs in ApoE-/- Mice

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Male C57BL/6 WT mice and ApoE−/− mice (C57BL/6) were purchased from Beijing Vital River Laboratory Animal Technology Co., Ltd. and housed in specific‐pathogen‐free environment. ApoE−/− mice were fed with a normal diet (ND), high‐fat diet (HFD) (21% crude fat, 0.15% cholesterol, 19.5% casein) depending on the experimental group. The feeding period spanned over 12 weeks, with ad libitum access to food and water. During the experiment, several parameters such as the body weight, blood glucose, cholesterol, LDL, high‐density lipoprotein (HDL), triglyceride and uric acid in serum were measured. After 12 weeks of feeding, the mice fed with ND were injected with PBS solution as control; the mice fed with HFD were injected with PBS solution as control, or injected with ox‐LDL‐M‐EVs or ox‐LDL‐M‐EVs‐miR‐19b‐3p‐KD [10 μg ox‐LDL‐M‐EVs labelled with PKH26 (red)] (each n = 10). In order to validate whether the transfection was successful, immunofluorescence was performed 24 h after injection. Subsequently, all the mice were euthanized for molecular biology testing.
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6

Genetically Engineered Mouse Model for Cancer Research

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All animal work was carried out under UK Home Office Project Licences 70/7413 and P6AB1448A granted under the Animals (Scientific Procedures) Act 1986 (Establishment Licence, X702B0E74 70/2902), and was approved by the “Animal Welfare and Ethical Review Body” at The Institute of Cancer Research (ICR). Mice with a genetic deletion in Endo180 (Mrc2)15 (link) were backcrossed for at least six generations with either BALB/c or C57BL/6 (Charles River) mice. Genotypes were confirmed by PCR. Endo180−/− colonies were maintained at the ICR. Aged-matched 6–8 week-old female BALB/c or C57BL/6 mice were purchased from Charles River. Animals were housed in IVC type cages which are run under negative airflow. Mice were companion held, had food and water ad libitum and monitored daily by ICR Biological Services Unit staff. Animal holding rooms were maintained within the parameters recommended in the Home Office Code of Practice with temperatures being 21 °C +/− 2 °C, humidity 55% +/− 10% and a light cycle of 12 h dark/light. In all cases, experiments were terminated if the primary tumour reached a maximum allowable diameter of 17 mm or if a mouse showed signs of ill health.
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7

Murine Model Characterization for Research

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Male or female DBA/1 (Janvier; Le Genest-Saint-Isle, France), C57Bl/6 (Charles River), OTII/RAG−/− C57Bl/6, NOG and NSG (Charles River) mice age 10–12 weeks were housed in filter-top cages with freely available food and sterile water (Plexx), at the UMR1098 Animal facility (agreement #C25-056-7). NOG mice were originally provided by the central institute for experimental animals. All experimental studies complied with European legislation and were approved under project number #02831 by local (Animal ethic committee of Besançon [Comité d'Ethique Bisontin en Experimentation Animale], #58) and national (French Ministry of Higher Education and Research [Ministère de l'Education Nationale, de l'Enseignement Supérieur et de la Recherche]) authorities for the care and use of animals.
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8

Circadian Rhythm Analysis in Genetically Modified Mice

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Male C57Bl/6 mice (Charles River, Quebec, Canada), and ClockΔ19/Δ19 mice47 (link),48 (link) (homozygous for the CLOCK point mutation, C57Bl/6 background) and Nr1d1−/− mice46 (link) (null mutation of Rev-Erb, C57Bl/6 background) were housed in a 12 h light (L):12 h dark (D) cycle with lights on at 9:00 am (Zeitgeber time 0, ZT0) and lights off at 9:00 pm (ZT12). All animals were housed at the Central Animal Facility, University of Guelph. Standard rodent chow and water were provided ad libitum throughout the study. All studies were approved by the University of Guelph Institutional Animal Care and Use Committee, and the Canadian Council on Animal Care guidelines. ClockΔ19/Δ19 and Nr1d1−/− mice were genotyped by allele-specific PCR (see Supplementary Table 7 for primers). Genotyping, and phenotyping of circadian locomotor activity using running wheel actigraphy, was previously described14 (link),48 (link),49 (link). Individually housed mice were entrained to a diurnal 12:12 L:D cycle for 2 weeks, followed by transfer to constant darkness (circadian cycle, DD). The data were analyzed using ClockLab (ActiMetrics).
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9

Tamoxifen-Induced Decorin/Biglycan Knockout

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This study was approved by the University of South Florida and the University of Pennsylvania Institutional Animal Care and Use Committees. These studies were performed using female wild type mice (C57/BL6 Charles River) and our tamoxifen (TM) inducible compound decorin/biglycan knockout mouse model (TM- Dcn−/−/Bgn−/−) in a C57/BL6 Charles River background.
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10

Pseudomonas aeruginosa Lung Infection

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C57Bl/6 (Charles River), IL-17a−/− and IL-17ra−/− mice (background C57Bl/6), male, 8–10 weeks old, were maintained in specific pathogen-free conditions. Mice were injected intratracheally with 1–2 × 106 CFU of P. aeruginosa, embedded in agar beads, following established procedures25 (link)29 (link).
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