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5 protocols using chemidoc touch detection system

1

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

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Samples were lysed with RIPA containing 1% protease and phosphate inhibitor cocktail (P8340; Sigma-Aldrich). Proteins were run on 10% SDS-PAGE and then transferred to PVDF membranes, which were incubated with primary antibodies at 4°C overnight and probed by secondary antibodies. Blots were visualized with enhanced chemiluminescence (WBKLS0500; Millipore, Temecula, CA) and the ChemiDoc Touch detection system (Bio-Rad). The following primary antibodies were used: slug (9585; Cell Signaling Technology, Danvers, MA; 1:1000), β-catenin (8480; Cell Signaling Technology; 1:1000), p-eIF2α (3398; Cell Signaling Technology; 1:1000), p-GSK3β (5558; Cell Signaling Technology; 1:1000), GAPDH (ab8245; Abcam, Cambridge, England; 1:1000), C/EBPβ (ab32358; Abcam; 1:1000), N-cadherin (ab76057; Abcam; 1:1000), MMP-2 (ab92536; Abcam; 1:1000), AKT (ab8805; Abcam; 1:1000), p-AKT (ab81283; Abcam; 1:1000), vimentin (ab92547; Abcam; 1:5000), and cleaved caspase-3 (19677-1-AP; Proteintech, Rosemont, IL; 1:500).
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2

Western Blot Analysis of Autophagy-Related Proteins

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Protein concentrations were determined using the BCA method (23225; Beyotime, Shanghai, China). Proteins (20 μg) were separated on 8–15% SDS‐PAGE and transferred onto PVDF membranes (ISEQ00010 0.22 μm; Millipore, Billerica, MA USA). Membranes were blocked for 2 h at room temperature with 5% non‐fat dry milk in TBST, incubated with primary antibodies overnight at 4°C, and probed with HRP‐conjugated secondary antibody (1:5000; Santa Cruz Biotechnology, Dallas, TX, USA) for 1 h at room temperature. Proteins were visualized with enhanced chemiluminescence (Millipore) and the ChemiDoc Touch detection system (Bio‐Rad). The following primary antibodies were used: rabbit anti‐PARP, cleaved caspase‐3, microtubule associated protein 1 light chain 3 beta (LC3B), sequestosome 1 (p62), AMPK, phosphorylated‐ (p‐)AMPK (Thr172), mTOR, p‐mTOR (Ser2448), Beclin‐1, p‐Beclin‐1 (Ser93), GAPDH (Cell Signaling Technology, Danvers, MA, USA).
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Western Blot Protein Quantification

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Tissues or differently processed cells were collected and lysed via a protein extraction agent (Beyotime, Beijing, China). Total protein was quantified using the bicinchoninic acid (BCA) (Beyotime) method. In each lane, 25–50 μg protein per sample was loaded for sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and shifted onto PVDF membranes (0.45 μm, Millipore, NY, USA). After blocked by 5% skim milk solution for 1 h, the membranes were hatched with the indicated antibodies at 4°C for 16 h. The membranes were then hatched with the corresponding horseradish peroxidase-conjugated secondary antibodies at 20°C for 1 h. Immunoreactive proteins were visualized and quantified via a chemiluminescence reagent (Beyotime, Beijing, China) with a ChemiDoc™ Touch detection system (Bio-Rad Laboratories, Hercules, CA, USA) and Image J software. Detailed information of all antibodies is shown in Supplementary Table 2.
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Western Blot Analysis of Glioma Proteins

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Western blot assay was performed as previously described.24 Briefly, the total protein of glioma tissues was extracted using a protein extraction kit (Beyotime). Equivalent amounts of protein (25‐50 μg) were then electrophoresed and transferred to polyvinylidene fluoride membranes (0.45 μm; Millipore). After being blocked, membranes were incubated with antibodies against ATF6 (24169‐1‐AP, Proteintech), EIF2α (sc‐133132, Santa), p‐EIF2α (# 3398S, CST), p‐IRE1α (sc‐390960, Santa) and GAPDH (60004‐1‐Ig, Proteintech) at 4°C for 16 hours. The membranes were then incubated with appropriate secondary antibodies (ProteinTech). Protein bands of interest were detected and quantified using a chemiluminescence kit (Beyotime), the ChemiDoc™ Touch detection system (Bio‐Rad Laboratories) and Image J software (National Institutes of Health).
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5

Western Blot Protein Quantification

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Protein was isolated from tissues or cells and quantified using the bicinchoninic acid reagent (P0012S, Beyotime, Beijing, China). An equivalent amount of protein extracted from different samples was loaded for sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto a PVDF membrane. After blocking with 2% bovine serum albumin, membranes were hatched with primary antibodies and thereafter with horseradish peroxidase-conjugated secondary antibodies (Proteintech, USA). Blots were detected and quantified using the Pierce™ Enhanced Chemiluminescent Substrate kit (Thermo Fisher Scientific, Waltham, MA, USA) with a ChemiDoc™ Touch detection system (Bio-Rad Laboratories, Hercules, CA, USA) and ImageJ software.
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