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Superfrost plus adhesion slides

Manufactured by Thermo Fisher Scientific
Sourced in United States, Germany, United Kingdom

SuperFrost Plus adhesion slides are laboratory equipment designed to securely hold tissue samples during microscopic analysis. These slides feature a specialized surface treatment that enhances the adhesion of biological samples, ensuring their stable attachment during various staining and processing procedures.

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48 protocols using superfrost plus adhesion slides

1

Toluidine Blue Staining of Cartilage

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toluidine blue O stain was used to observe the cartilage matrix. The colorant stains nuclei as blue and proteoglycans and glycosaminoglycans as light blue to violet. Cell pellets were washed twice in PBS, fixed in 10% formalin for 15 min at RT, then included in paraffin, and sliced into 5 μm sections on the SuperFrost Plus adhesion slides (Thermo Fisher Scientific) which were previously coated with poly-L-lysine (Sigma) to prevent section from detachment.
For the coloration, slides were deparaffinized and dipped in the 0.2% w/v toluidine blue O solution (the powder was provided by Serva, Germany) for 5 min at RT followed by rinsing in distilled water twice, each time for 5 min and mounted with DPX mounting medium.
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2

Quantification of Akt2 Expression in FFPE Tissues

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Expression of Akt serine/threonine kinase 2 (Akt2) was analyzed using RISH instead of immunohistochemistry to avoid non-specific results due to the high similarities of amino acid sequences between three Akt isotypes [36 (link)]. RISH was conducted using the commercial kit (RNAscope, Advanced Cell Diagnostics, Newark, CA, USA) Concisely, FFPE tissues were sectioned into 4-μm on SuperFrost Plus adhesion slides (Thermo Fisher Scientific, Waltham, MA, USA) and were baked in 60 °C for 1 h. Tissue slides were then deparaffinized in xylene twice for 5 min each, washed in 100% ethanol twice for 1 min each, and air-dried. After deparaffinization, endogenous hydrogen peroxidase activity was quenched and slides were boiled in target retrieval solution for 15 min on a hot plate, with the temperature adjusted from 93 to 98 °C. For probe penetration, protease was applied onto the tissues and incubated in 40 °C for 30 min. Thereafter, sections were washed in distilled water, Akt2 probe (NCBI reference: NM_001012340.1) was hybridized, and the signal was amplified and developed by reacting with 3′3-diaminobenzidine. Slides were counterstained in 50% Gill’s hematoxylin. To examine whether RNA level is intact in FFPE tissues, the endogenous housekeeping gene UBC (NCBI reference: XM_038436353.1) was hybridized to serial sections of each sample.
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3

Laser Ablation-ICP-MS for Brachiocephalic Artery

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The Forschungszentrum Jülich (Jülich, Germany) conducted all technical processing and final visualization by a company-owned software. Cryostatic sections of the brachiocephalic arteries that were 9 µm thick were generated. They were collected on SuperFrost Plus adhesion slides at −20 °C (Thermo Fisher Scientific, Dreieich, Germany). Afterwards, the samples were processed with the laser ablation system NWR 213 (New Wave Research, Fremont, CA, USA). It was linked to an inductively coupled plasma mass spectrometer (Agilent 7900, Agilent Technologies, Santa Clara, CA, USA) which performed scans with a measured spot area of 20 µm, a laser speed of 20 µm/s, and an energy level of 34%. Specimens of rat brains with a specified amount of Gd were used as standards and were measured under the same conditions to verify the accuracy of Gd quantification in harvested brachiocephalic arteries.
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4

SARS-CoV-2 Spike and Nucleocapsid Protein Staining

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5μm- sections of FFPE tissues on SuperFrost Plus adhesion slides (ThermoScientific, Cat. 10149870) were deparaffinized using 3 solutions of absolute m-xylene or Histoclear II histology (SLS, Cat. NAT1334), rehydrate in 90%, 80%, 70% ethanol solutions and DPBS (ThermoFisher, Cat.14190169). After then, the slides were immersed in an antigen retrieval solution pH 9.0 (Agilent Dako, S236784-2) and kept in a pressure cooker for 2 minutes. The cells into tissues were permeabilized in a 0.1%Tween20 solution for 5 minutes. The blocking, staining with primary and secondary antibodies were realized according to the manufactures of the following IHC kits: Mouse and rabbit specific HRP/DAB IHC detection Kit micro-polymer (Abcam, Cat.ab236466) and ImmPRESS[R] Duet double staining kit anti-rabbit AP/anti-mouse HRP (Vector laboratories, Cat.mp7724). Anti-SARS-CoV-2 spike antibody, targeting the S2 subunit, and anti-SARS-CoV-2 nucleocapsid (1:300) antibody were acquired from Insight Biotechnology (Cat. GTX632604) and BioserverUK (Cat.BSV-COV-AB-13), respectively. Anti-CD68 was obtained from Cell signalling (Cat. 7643T). All samples were stained with haematoxylin.
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5

Multicolor IAPP/ACM Fibril Imaging

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IAPP or IAPP/ACM mixtures (1/2) containing 10% N-terminal fluorescently-labeled analogs TAMRA-IAPP and Atto647N-ACM (IAPP(total), 16.5 µM; ACM(total), 33 μM) were incubated in 10 mM sodium phosphate buffer, pH 7.4 for 7 days (20 °C). Aliquots (30–40 μl) were pipetted onto SuperFrost Plus adhesion slides (Thermo Fisher Scientific), air-dried, covered with a high precision coverslip (#1.5; Ibidi), and embedded using Prolong Diamond Antifade Mountant (Thermo Fisher Scientific). CLSM and STED were performed using a Leica SP8 STED 3X microscope (HC PL APO 93x/1.30 GLYC CORR STED objective) with a tunable white light laser source to excite fluorophores70 (link). Depletion power (660 nm (TAMRA), 775 nm (Atto647N)), and time-gated detection of excited light were chosen to minimize sample damage while optimizing xyz-resolutions. Images were collected in a sequential scanning mode (hybrid-diode detectors) to maximize signal collection while minimizing channel cross-talk (TAMRA: excitation 552 nm/emission 557–645 nm; Atto647N: excitation 646 nm/emission 651–700 nm). 3D reconstructions/fibril measurements were performed using Leica’s LAS-X software package (v1.2). Datasets were deconvoluted using Leica’s LIGHTNING application.
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6

Tissue Sectioning and Preparation

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All chemicals were from Sigma Aldrich, UK unless otherwise stated. Brain tissue received as FFPE tissue blocks were cooled on wet ice for 10 min and adjacent serial sections prepared at 5μm using a rotary RM2025 microtome, equipped with Surgipath DB80 LX low-profile stainless-steel microtome blades (both from Leica Microsystems, UK). Sections were floated onto ultrapure water (conductivity <0.067μS/cm) at 40°C and transferred onto SuperFrost® Plus adhesion slides (Thermo Scientific, UK). Excess wax was removed from dried sections by heating at 62°C for 20 min, before dewaxing and rehydration procedures.
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7

Intestinal Immune Cell Profiling

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Small intestine was dissected out and intestinal contents flushed with cold PBS. The small intestine was opened lengthways and cut into 3-cm long pieces, washed three times in cold PBS, and placed in 4% paraformaldehyde (ThermoFisher #28906) overnight at 4°C. Small intestine pieces were then washed with PBS and placed in 30% sucrose-PBS overnight. Swiss rolls were formed, embedded in 7.5% gelatin (Sigma) and 10% sucrose, and then flash frozen in a -40°C isopentane (Sigma) bath. The embedded Swiss rolls were then cryosectioned at 20 μm using a Leica CM3050 S Cryostat onto SuperFrost Plus Adhesion Slides (ThermoFisher #28906). Cryosections were washed three times with 1% Triton X-100 (BDH) in PBS. Sections were blocked with 2% goat serum (ab7481, Abcam) in PBS. Antibody staining was performed in blocking solution: anti-CD11b PE (BD Biosciences, 553311, M1/70), anti-Gr1 FITC (eBioscience, 11-5931-85, RB68C5), and anti-CD3 FITC (Biolegend, 100306, 145-2C11). Antibodies were added overnight at 4°C. Sections were washed three times for 15 minutes each with PBS. Slides were mounted in DAPI Fluoromount-G Mounting Medium (Southern Biotech).
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8

Quantitative Mapping of Element Distributions

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Aortic tissues were cut into 10 µm cryosections at −20 °C and mounted on SuperFrost Plus adhesion slides (Thermo Scientific, Waltham, MA, USA). Laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) analysis was performed on a commercial LA system (NWR-213, ESI, Bozeman, MT, USA) equipped with a two-volume sample chamber coupled to a sector field ICP-MS (Element XR, Thermo Fisher Scientific, Bremen, Germany) (Supplementary Table 6).
Helium was used as the carrier gas, and argon was added before reaching the torch using a Y-piece (Supplementary Table 7). The ICP-MS was tuned for maximum ion intensity and good signal stability (RSD < 5%), keeping the oxide ratio (ThO/Th) below 1% during the continuous ablation of a microscopic glass slide. Matrix-matched agarose gel standards cast on glass slides were used for drift control and calibration67 (link). These standards contain Gd concentrations between 26.6 pg mm−2 and 600.1 pg mm−2. Averaged intensities of six line-scans per standard were used for calibration. Data visualization was done in Origin 2022 (OriginLab Corporation, Northampton, MA).
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9

Immunofluorescence and In Situ PLA

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Immunofluorescence staining was performed on 4% paraformaldehyde-fixed and 0.1% Triton X-100–permeabilized cells on Superfrost Plus adhesion slides (Thermo Fisher), followed by confocal microscopy imaging. Duolink in situ PLA was performed using a DUO92008 kit (Merck). See the “Methods” section of the supplemental Information for further details.
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10

In Situ Hybridization of Mouse Pibf1

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For in situ hybridization (ISH) of mouse Pibf1, samples were fixed in 10% neutral-buffered formalin, embedded in paraffin, and sectioned into 5-μm-thick slices on SuperFrost Plus adhesion slides (J1800AMNZ, ThermoFisher Scientific). Following the manufacturer’s instructions, a chromogenic RNA ISH assay was performed using the RNAscope 2.5 HD detection kit (Brown) for FFPE tissues (322371, Advanced Cell Diagnostics). RNAscope probes (all from Advanced Cell Diagnostics) were used for mouse Ppib (313911), bacterial dapB (310043), and mouse Pibf1 (408871) was used as the positive control, negative control, and target probe, respectively.
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