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5 protocols using gtx100042

1

Multicolor Immunofluorescence Labeling of Brain Tissue

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Methods for tissue fixation, preparation of free-floating sections using a Leica 9000 s microtome (Leica, Wetzlar, Germany) and subsequent immunofluorescence staining were performed as described previously (Kowalewski et al., 2015 (link)). Primary antibodies used for immunofluorescence were against GFAP (1:500; clone G-A-5, G3893, Sigma); NeuN (1:2000; clone A60, MAB377, Millipore, Merck, Darmstadt, Germany), Olig2 (1:1000; AB9610, Millipore), Iba1 (1:500; GTX100042, GeneTex, Irvine, CA, USA), CD68 (1:500; clone FA-11 (MCA1957, AbD Serotec), calbindin (1:500; D-28K clone CB-955, C9848, Sigma), myelin basic protein (1:1000; MAB386, Millipore), Lamp1 (1:500; clone 1D4B, see above). The monoclonal antibody against GM2 gangliosides (IgM from mouse) was a kind gift from Prof. Kostantin Dobrenis (Albert Einstein College of Medicine of Yeshiva University, NY). Secondary antibodies were Alexa-Fluor conjugates (1:2000) and purchased from Invitrogen. Nuclei were stained with DAPI (Sigma). Confocal microscopy was performed with an LSM 700 (Zeiss, Oberkochen, Germany) or Olympus FV1000 microscope (Tokyo, Japan).
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2

Immunohistochemistry of Spinal Cord Microglia

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After anesthetization, mice were intracardially perfused with PBS followed by 4% paraformaldehyde in PBS. Coronal sections of spinal cords at 20 μm were obtained on a Leica 1950 cryostat. IHC procedure was performed according to the methods described previously25 (link). Briefly, the sections were permeablized and blocked with 10% donkey serum in PBS containing 0.3% Triton X-100 for half an hour. Consequently, they were incubated with primary antibody against Iba I (Gene Tex, GTX100042) at 4 °C overnight followed by thoroughly wash with PBS. After incubation with secondary antibody conjugated with Alexa 488 (Invitrogen, A21208), the sections were mounted on slides. The fluorescence was visualized using an inverted fluorescent microscope (Olympus IX 81, Japan).
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3

Brain Immunofluorescence and Immunoblotting

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Analytical grade chemicals were purchased, if not stated otherwise, from Sigma-Aldrich (MO., USA). The following antibodies were used for immunofluorescence on brain sections: CD68 (1:500; rat monoclonal; clone FA-11 (MCA1957, AbD Serotec)), LAMP1 (1:500; rat monoclonal; clone 1D4B, Developmental Studies Hybridoma Bank (University of Iowa, Iowa City, IA, USA)), and Iba1 (1:500, rabbit polyclonal; GTX100042, Genetex). Fluorophore-conjugated secondary antibodies against the corresponding primary antibody species (AlexaFluor 488, AlexaFluor 594, and AlexaFluor 647) were purchased from Invitrogen/Molecular Probes and were diluted 1:500. HRP-coupled secondary antibodies were purchased from Dianova. The following primary antibodies were used for immunoblotting: TMEM106B (1:1000, rabbit monoclonal;E7H7Z, Cell Signaling Technology), and Na+/K+-ATPase (1:250, mouse monoclonal; clone a5, Developmental Studies Hybridoma Bank (University of Iowa, Iowa City, IA, USA).
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4

Immunohistochemical Analysis of Substantia Nigra

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After 3 months of WGE treatment, mice were sacrificed at the age of 11.5 months. The substantia nigra and striatum were dissected out. The substantia nigra was subjected to immunostaining, as described previously (Lin et al., 2020 (link)). Anti-tyrosine hydroxylase (TH) (Millipore, AB152, 1:200) and anti-ionized calcium-binding adapter molecule 1 (Iba-1) (GeneTex, GTX100042, 1:200) were used as primary antibodies for 24 hr at 4°C. Secondary antibodies were DyLight 488 goat anti-rabbit 1:300 and Alexa Fluor 546 goat anti-rabbit at 1:200 (25°C for 1 hr). Mounting medium with DAPI (GeneTex, GTX30920) was used as a counterstain.
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5

Immunofluorescent Mapping of Microglia and Neurons

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Brain tissues were processed for immunofluorescent detection. The primary antibodies used were anti-ionized calcium-binding adaptor molecule-1 (Iba-1; 1:250; GTX100042, GeneTex, Alton Pkwy Irvine, CA, USA) and anti-MAP2 (1:200; GTX11267, GeneTex, Alton Pkwy Irvine, CA, USA). The brain sections were incubated with primary antibodies overnight, then washed and incubated with either Alexa Fluro 488- (1:500; GTX213111, GeneTex, Alton Pkwy Irvine, CA, USA) or Alexa Fluro 594- (1:500; GTX213110, GeneTex, Alton Pkwy Irvine, CA, USA) tagged secondary antibodies at room temperature. The number of cells positive for Iba-1 and MAP2 was counted in three non-overlapping fields in the cortex and hippocampus at ×200 magnification. Next, the sections were incubated in a 1:200 dilution of a TRITC-conjugated goat anti-rabbit secondary antibody and FITC-conjugated goat anti-mouse secondary antibody for 1 h at room temperature and then washed three times with PBS for 10 min. Then, the sections were stained with DAPI solution for 10 min at room temperature. Finally, fluorescence images were obtained by fluorescence microscopy (Leica DM 6000B; Mannheim, Germany), and the number of cells was counted with the ImageJ software.
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