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3 protocols using sc 20682

1

Immunoblotting for Protein Detection

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For immunoblotting, extraction of proteins from cultured cells with a modified buffer was followed by immunoblotting with corresponding antibodies. Briefly, protein samples were fractionated on 10 - 15 % SDS polyacrylamide gels and electroblotted onto Hybond ECL nitrocellulose membranes (Amersham Pharmacia Biotech) using a semidry transfer apparatus (Bio-Rad). Rabbit polyclonal antibodies recognizing PARK2 (ab15954), were obtained from Abcam. Mouse monoclonal antibody recognizing PARK2 (sc-32282) and Lamin B1 (sc-20682) were purchased from Santa Cruz Biotechnology. Rabbit polyclonal antibody recognizing NF-κB (sc-372) was obtained from Santa Cruz Biotechnology. Anti-β-tubulin and HA mouse antibodies were purchased from Sigma.
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2

Western Blot Analysis of RNA-Binding Proteins

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Cell extracts were resolved on a 10% SDS–PAGE gel and transferred to polyvinylidene fluoride membrane (Millipore, San Diego, CA) using a semidry apparatus. The membranes were blotted with the antibodies indicated in each figure, and bands were visualized using the ECL Western blotting substrate (Thermo Fisher Scientific, Waltham, MA). Membranes were incubated with the following primary antibodies: anti-Rck/p54 (ab54611; Abcam, Cambridge, United Kingdom), anti-Ago2 (ab57113; Abcam), anti-Dcp1a (ab57654; Abcam), anti–β-actin (A2228; Sigma), anti-Matr3C (ab84422; Abcam), anti-Matr3N (ab51081; Abcam), PSF (sc-101137; Santa Cruz, Santa Cruz, CA), DDx5 (ab21696; Abcam), Importin-β (ab2811; Abcam) mouse anti–α-tubulin (T5168; Sigma-Aldrich), rabbit-LaminB1 (sc-20682; Santa Cruz). Secondary antibodies conjugated to horseradish peroxidase (GE Healthcare) were used at 1:10,000 dilutions and developed using ECL reagent and X-ray film. Densitometry measurements were performed using ImageJ.
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3

Western Blot Analysis of Caspase-1

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Total protein was extracted using Sodium dodecyl sulfate (SDS) reducing buffer (Biorad, CA, USA) and separated on 8–12% gradient SDS polyacrylamide gels and transferred on Polyvinylidene difluoride (PVDF) membranes (Biorad, CA, USA). Membranes were blocked with 5% non-fat dry milk for 30 min at room temperature, followed by overnight incubation with a primary antibody against caspase-1 (1:300, Santa Cruze) at 4 °C. Membranes were washed with PBS with 0.1% Tween 20 and incubated for one hour at room temperature with a secondary antibody (goat polyclonal anti-mouse IgG, ab205719, 1:3000) for one hour. Membranes were stained using anti-beta-actin (1:4000, A01546, GenScript) antibody to normalize protein expression for total protein and cytoplasmic fraction. Membranes were stained with anti-lamin b1 (1:300, sc-20682, Santa Cruz) antibody and secondary human, bovine, horse, horseradish peroxidase-conjugated goat anti-mouse IgGs (H&L) (A106PS; American Qualex) to normalize protein expression for nuclear proteins. Western blot results were visualized using Clarity Western ECL reagents (Biorad, CA, USA) and a ChemiDoc XRS + (Biorad, CA, USA).
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